Experiment set20IT014 for Escherichia coli BW25113

Compare to:

M9 Acetate 0.5% aerobic

Genes with specific phenotypes:

  gene name fitness t score description  
b4015 aceA -3.2 -15.0 isocitrate lyase (NCBI) compare
b1702 pps -3.0 -20.6 phosphoenolpyruvate synthase (NCBI) compare
b1333 uspE -2.6 -5.5 stress-induced protein (NCBI) compare
b2463 maeB -2.6 -16.2 malic enzyme (NCBI) compare
b1579 intQ -2.5 -9.7 Qin prophage; predicted defective integrase (RefSeq) compare
b0310 ykgH -2.2 -7.3 predicted inner membrane protein (NCBI) compare
b0326 yahL -1.9 -9.5 hypothetical protein (NCBI) compare
b2369 evgA -1.9 -8.4 DNA-binding response regulator in two-component regulatory system with EvgS (NCBI) compare
b1690 ydiM -1.9 -9.6 predicted transporter (NCBI) compare
b2790 yqcA -1.8 -11.7 flavodoxin (NCBI) compare
b4640 yoeG -1.8 -5.9 no description compare
b1040 csgD -1.7 -5.5 DNA-binding transcriptional activator in two-component regulatory system (NCBI) compare
b1680 sufS -1.7 -10.7 selenocysteine lyase (NCBI) compare
b1679 sufE -1.7 -6.1 cysteine desufuration protein SufE (NCBI) compare
b3138 agaB -1.7 -7.7 N-acetylgalactosamine-specific enzyme IIB component of PTS (NCBI) compare
b2611 ypjD -1.7 -8.8 predicted inner membrane protein (RefSeq) compare
b1682 sufC -1.6 -8.9 cysteine desulfurase ATPase component (NCBI) compare
b1060 yceP -1.6 -9.6 orf, hypothetical protein (VIMSS) compare
b3924 fpr -1.6 -7.5 ferredoxin-NADP reductase (NCBI) compare
b1877 yecT -1.5 -5.6 orf, hypothetical protein (VIMSS) compare
b0499 ylbH -1.5 -8.6 conserved protein, rhs-like (RefSeq) compare
b0390 aroM -1.5 -11.0 hypothetical protein (NCBI) compare
b1683 ynhE -1.5 -10.4 orf, hypothetical protein (VIMSS) compare
b1681 sufD -1.5 -10.7 component of SufBCD complex (NCBI) compare
b3676 yidH -1.5 -6.0 conserved inner membrane protein (NCBI) compare
b0234 yafP -1.5 -5.9 predicted acyltransferase with acyl-CoA N-acyltransferase domain (NCBI) compare
b1168 b1168 -1.5 -7.9 putative proteases (VIMSS) compare
b4462 ygaQ -1.5 -6.5 hypothetical protein (RefSeq) compare
b2271 yfbL -1.4 -8.7 putative aminopeptidase (VIMSS) compare
b4494 arpB -1.4 -5.6 no description compare
b1691 ydiN -1.4 -6.3 predicted transporter (RefSeq) compare
b3723 bglG -1.4 -6.4 transcriptional antiterminator of the bgl operon (NCBI) compare
b1762 b1762 -1.3 -5.2 orf, hypothetical protein (VIMSS) compare
b3622 rfaL -1.3 -7.5 O-antigen ligase (NCBI) compare
b0136 yadK -1.3 -6.9 predicted fimbrial-like adhesin protein (NCBI) compare
b4346 mcrB -1.3 -8.7 component of McrBC 5-methylcytosine restriction system (VIMSS) compare
b0198 metI -1.3 -10.2 DL-methionine transporter subunit (NCBI) compare
b2410 yfeH -1.3 -7.7 predicted inner membrane protein (NCBI) compare
b3456 livM -1.2 -9.0 leucine/isoleucine/valine transporter subunit (NCBI) compare
b1028 ymdE -1.1 -5.8 orf, hypothetical protein (VIMSS) compare
b1734 chbF -1.1 -6.0 cryptic phospho-beta-glucosidase, NAD(P)-binding (NCBI) compare
b1276 acnA -1.1 -6.9 aconitate hydratase (NCBI) compare
b3675 yidG -1.1 -6.7 predicted inner membrane protein (NCBI) compare
b0199 metN -1.1 -8.2 DL-methionine transporter subunit (NCBI) compare
b2623 yfjH -1.1 -6.2 CP4-57 prophage; predicted protein (NCBI) compare
b3457 livH -1.0 -6.8 leucine/isoleucine/valine transporter subunit (NCBI) compare
b3780 rhlB +1.3 10.4 ATP-dependent RNA helicase (NCBI) compare
b4141 yjeH +1.4 12.8 predicted transporter (NCBI) compare
b1191 b1191 +1.5 6.8 orf, hypothetical protein (VIMSS) compare
b3740 gidB +1.6 11.6 glucose-inhibited division protein B (NCBI) compare
b2502 ppx +1.9 15.1 exopolyphosphatase (NCBI) compare
b0686 ybfF +2.1 12.6 hypothetical protein (NCBI) compare
b1612 fumA +2.5 14.8 fumarate hydratase (fumarase A), aerobic Class I (NCBI) compare
b3752 rbsK +2.5 7.4 ribokinase (NCBI) compare
b1611 fumC +2.6 16.6 fumarate hydratase (NCBI) compare
b0382 yaiB +3.5 13.8 hypothetical protein (NCBI) compare


Specific phenotypes for Sodium acetate across organisms