Experiment set20IT013 for Escherichia coli BW25113

Compare to:

M9 Acetate 0.5% aerobic

Genes with specific phenotypes:

  gene name fitness t score description  
b1702 pps -2.7 -17.0 phosphoenolpyruvate synthase (NCBI) compare
b4015 aceA -2.7 -15.7 isocitrate lyase (NCBI) compare
b2463 maeB -2.5 -15.7 malic enzyme (NCBI) compare
b1579 intQ -2.3 -10.7 Qin prophage; predicted defective integrase (RefSeq) compare
b1333 uspE -2.3 -7.9 stress-induced protein (NCBI) compare
b1690 ydiM -1.9 -8.9 predicted transporter (NCBI) compare
b4640 yoeG -1.9 -5.4 no description compare
b3924 fpr -1.8 -8.7 ferredoxin-NADP reductase (NCBI) compare
b2369 evgA -1.7 -7.4 DNA-binding response regulator in two-component regulatory system with EvgS (NCBI) compare
b2790 yqcA -1.7 -9.3 flavodoxin (NCBI) compare
b3138 agaB -1.6 -6.4 N-acetylgalactosamine-specific enzyme IIB component of PTS (NCBI) compare
b2611 ypjD -1.6 -9.7 predicted inner membrane protein (RefSeq) compare
b3622 rfaL -1.5 -8.7 O-antigen ligase (NCBI) compare
b1683 ynhE -1.5 -9.6 orf, hypothetical protein (VIMSS) compare
b0390 aroM -1.5 -10.8 hypothetical protein (NCBI) compare
b1682 sufC -1.5 -6.8 cysteine desulfurase ATPase component (NCBI) compare
b0499 ylbH -1.5 -7.4 conserved protein, rhs-like (RefSeq) compare
b1877 yecT -1.5 -5.5 orf, hypothetical protein (VIMSS) compare
b4184 yjfL -1.5 -7.7 conserved inner membrane protein (NCBI) compare
b0326 yahL -1.4 -6.6 hypothetical protein (NCBI) compare
b1680 sufS -1.4 -8.1 selenocysteine lyase (NCBI) compare
b0136 yadK -1.4 -7.7 predicted fimbrial-like adhesin protein (NCBI) compare
b2271 yfbL -1.4 -8.0 putative aminopeptidase (VIMSS) compare
b1060 yceP -1.4 -7.1 orf, hypothetical protein (VIMSS) compare
b1309 ycjM -1.3 -6.7 putative polysaccharide hydrolase (VIMSS) compare
b2774 ygcW -1.3 -5.6 putative oxidoreductase (VIMSS) compare
b0300 ykgA -1.3 -5.6 putative ARAC-type regulatory protein (VIMSS) compare
b2410 yfeH -1.3 -7.2 predicted inner membrane protein (NCBI) compare
b1968 yedV -1.3 -7.6 predicted sensory kinase in two-component regulatory system with YedW (NCBI) compare
b1691 ydiN -1.3 -6.2 predicted transporter (RefSeq) compare
b1276 acnA -1.2 -7.5 aconitate hydratase (NCBI) compare
b1168 b1168 -1.2 -6.1 putative proteases (VIMSS) compare
b3723 bglG -1.2 -6.6 transcriptional antiterminator of the bgl operon (NCBI) compare
b0198 metI -1.2 -9.6 DL-methionine transporter subunit (NCBI) compare
b0199 metN -1.1 -9.5 DL-methionine transporter subunit (NCBI) compare
b4346 mcrB -1.1 -7.4 component of McrBC 5-methylcytosine restriction system (VIMSS) compare
b1734 chbF -1.1 -5.4 cryptic phospho-beta-glucosidase, NAD(P)-binding (NCBI) compare
b0197 metQ -1.1 -7.1 DL-methionine transporter subunit (NCBI) compare
b3047 yqiH -1.1 -5.0 putative membrane protein (VIMSS) compare
b1191 b1191 +1.3 5.7 orf, hypothetical protein (VIMSS) compare
b4141 yjeH +1.3 11.2 predicted transporter (NCBI) compare
b0686 ybfF +2.0 12.6 hypothetical protein (NCBI) compare
b2502 ppx +2.0 14.2 exopolyphosphatase (NCBI) compare
b3752 rbsK +2.4 7.4 ribokinase (NCBI) compare
b1612 fumA +2.5 13.6 fumarate hydratase (fumarase A), aerobic Class I (NCBI) compare
b1611 fumC +2.6 16.9 fumarate hydratase (NCBI) compare
b0382 yaiB +3.4 13.5 hypothetical protein (NCBI) compare


Specific phenotypes for Sodium acetate across organisms