Experiment set1S96 for Azospirillum sp. SherDot2

Compare to:

NLN

200 most important genes:

  gene name fitness t score description  
MPMX19_03906 -3.0 -12.1 Pca regulon regulatory protein compare
MPMX19_04392 -2.3 -2.6 Bifunctional methionine biosynthesis protein MetXA/MetW compare
MPMX19_02981 -2.3 -6.2 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_05459 -2.3 -3.3 hypothetical protein compare
MPMX19_02268 -2.2 -5.7 hypothetical protein compare
MPMX19_01376 -2.1 -1.4 hypothetical protein compare
MPMX19_06275 -2.0 -12.2 Argininosuccinate lyase compare
MPMX19_00142 -2.0 -2.9 hypothetical protein compare
MPMX19_02658 -2.0 -11.1 Glutamate synthase [NADPH] small chain compare
MPMX19_05727 -2.0 -6.5 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX19_02267 -1.9 -2.8 hypothetical protein compare
MPMX19_02657 -1.9 -14.3 Glutamate synthase [NADPH] large chain compare
MPMX19_04276 -1.9 -1.7 hypothetical protein compare
MPMX19_01998 -1.9 -7.9 3-isopropylmalate dehydratase large subunit compare
MPMX19_01714 -1.8 -2.8 tRNA-modifying protein YgfZ compare
MPMX19_02511 -1.7 -2.6 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase compare
MPMX19_00128 -1.6 -11.2 hypothetical protein compare
MPMX19_00606 -1.6 -7.7 3-isopropylmalate dehydratase small subunit 1 compare
MPMX19_01365 -1.6 -2.6 hypothetical protein compare
MPMX19_01585 -1.6 -2.7 Zinc uptake regulation protein compare
MPMX19_01235 -1.5 -3.1 hypothetical protein compare
MPMX19_06808 -1.5 -3.0 HTH-type transcriptional regulator DmlR compare
MPMX19_03752 -1.5 -2.5 hypothetical protein compare
MPMX19_06277 -1.5 -9.1 hypothetical protein compare
MPMX19_00653 -1.5 -5.8 hypothetical protein compare
MPMX19_00126 -1.4 -3.3 hypothetical protein compare
MPMX19_01560 -1.4 -3.8 3'-5' exonuclease DinG compare
MPMX19_02543 -1.4 -2.7 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX19_04449 -1.4 -2.1 Inosine-5'-monophosphate dehydrogenase compare
MPMX19_00635 -1.4 -8.5 5,10-methylenetetrahydrofolate reductase compare
MPMX19_00262 -1.4 -2.6 Thiazole synthase compare
MPMX19_00649 -1.4 -4.3 Phosphoadenosine phosphosulfate reductase compare
MPMX19_02675 -1.4 -10.1 Phosphoenolpyruvate-dependent phosphotransferase system compare
MPMX19_00607 -1.3 -7.8 3-isopropylmalate dehydrogenase compare
MPMX19_04391 -1.3 -5.4 Homoserine O-acetyltransferase compare
MPMX19_01014 -1.3 -1.7 Indole-3-glycerol phosphate synthase compare
MPMX19_02207 -1.3 -0.8 N-(5'-phosphoribosyl)anthranilate isomerase compare
MPMX19_02875 -1.3 -3.6 hypothetical protein compare
MPMX19_00530 -1.3 -2.5 Orotate phosphoribosyltransferase compare
MPMX19_05678 -1.2 -5.0 hypothetical protein compare
MPMX19_02980 -1.2 -1.7 Hydrogen cyanide synthase subunit HcnA compare
MPMX19_01630 -1.2 -3.0 Phosphoribosylamine--glycine ligase compare
MPMX19_01364 -1.2 -9.1 O-succinylhomoserine sulfhydrylase compare
MPMX19_00694 -1.2 -3.0 2',3'-cyclic-nucleotide 2'-phosphodiesterase compare
MPMX19_03787 -1.2 -1.7 hypothetical protein compare
MPMX19_04205 -1.2 -3.2 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_00129 -1.2 -1.9 hypothetical protein compare
MPMX19_01883 -1.2 -2.7 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_06123 -1.2 -1.4 hypothetical protein compare
MPMX19_02580 -1.2 -2.2 Acetyltransferase compare
MPMX19_01054 -1.2 -4.2 Aspartate carbamoyltransferase compare
MPMX19_05044 -1.2 -2.0 hypothetical protein compare
MPMX19_06546 -1.1 -2.0 hypothetical protein compare
MPMX19_06150 -1.1 -3.9 Corrinoid adenosyltransferase compare
MPMX19_05989 -1.1 -3.4 HTH-type transcriptional regulator HdfR compare
MPMX19_03948 -1.1 -1.7 tRNA-Ser compare
MPMX19_01545 -1.1 -2.6 Lon protease compare
MPMX19_03499 -1.1 -2.8 Formate dehydrogenase, cytochrome b556(fdo) subunit compare
MPMX19_00705 -1.1 -3.8 Cell division coordinator CpoB compare
MPMX19_03072 -1.1 -1.7 hypothetical protein compare
MPMX19_01777 -1.1 -5.4 2-aminoadipate transaminase compare
MPMX19_02951 -1.1 -1.6 Deoxyribose-phosphate aldolase 1 compare
MPMX19_01015 -1.1 -1.9 Anthranilate phosphoribosyltransferase compare
MPMX19_02162 -1.1 -7.6 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX19_06050 -1.1 -8.8 Phosphoenolpyruvate carboxylase compare
MPMX19_00906 -1.1 -6.0 Amidophosphoribosyltransferase compare
MPMX19_01822 -1.1 -5.7 2-isopropylmalate synthase compare
MPMX19_05362 -1.1 -2.1 hypothetical protein compare
MPMX19_00838 -1.0 -2.3 GTP pyrophosphokinase rsh compare
MPMX19_02504 -1.0 -3.3 hypothetical protein compare
MPMX19_01939 -1.0 -3.6 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
MPMX19_02736 -1.0 -2.7 Tryptophan synthase beta chain compare
MPMX19_01304 -1.0 -4.5 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX19_04206 -1.0 -3.9 3-oxoacyl-[acyl-carrier-protein] synthase 3 compare
MPMX19_01494 -1.0 -5.4 Flagellar P-ring protein compare
MPMX19_03329 -1.0 -2.5 hypothetical protein compare
MPMX19_05831 -1.0 -2.5 Protein/nucleic acid deglycase 2 compare
MPMX19_05016 -1.0 -1.8 Sensor histidine kinase RcsC compare
MPMX19_06253 -1.0 -2.0 hypothetical protein compare
MPMX19_05119 -1.0 -7.3 Glucose-6-phosphate 1-dehydrogenase compare
MPMX19_06353 -1.0 -1.7 hypothetical protein compare
MPMX19_04535 -1.0 -2.6 Maleate isomerase compare
MPMX19_00260 -1.0 -2.0 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_05313 -1.0 -1.8 4,4'-diapolycopene aldehyde oxidase compare
MPMX19_05272 -1.0 -2.8 hypothetical protein compare
MPMX19_01377 -1.0 -2.5 Outer membrane protein assembly factor BamA compare
MPMX19_00693 -1.0 -4.3 5-formyltetrahydrofolate cyclo-ligase compare
MPMX19_00647 -1.0 -7.0 Bifunctional enzyme CysN/CysC compare
MPMX19_01053 -0.9 -2.4 Dihydroorotase compare
MPMX19_05023 -0.9 -1.7 hypothetical protein compare
MPMX19_00648 -0.9 -5.3 Sulfate adenylyltransferase subunit 2 compare
MPMX19_06580 -0.9 -4.0 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_00652 -0.9 -7.5 Sulfite reductase [ferredoxin] compare
MPMX19_02180 -0.9 -2.5 hypothetical protein compare
MPMX19_03916 -0.9 -1.8 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
MPMX19_04362 -0.9 -1.9 Cytidine deaminase compare
MPMX19_05690 -0.9 -4.4 Protein phosphotransferase ChpT compare
MPMX19_00503 -0.9 -2.7 ATP-dependent Clp protease ATP-binding subunit ClpA compare
MPMX19_00208 -0.9 -2.0 hypothetical protein compare
MPMX19_01486 -0.9 -4.3 Flagellar L-ring protein compare
MPMX19_05575 -0.9 -2.5 hypothetical protein compare
MPMX19_00166 -0.8 -2.0 hypothetical protein compare
MPMX19_03019 -0.8 -2.1 hypothetical protein compare
MPMX19_03976 -0.8 -3.1 hypothetical protein compare
MPMX19_05679 -0.8 -5.4 Flagellum-specific ATP synthase compare
MPMX19_00912 -0.8 -6.1 Bifunctional uridylyltransferase/uridylyl-removing enzyme compare
MPMX19_00650 -0.8 -4.5 Siroheme synthase compare
MPMX19_05747 -0.8 -2.2 Transcriptional regulatory protein DegU compare
MPMX19_03655 -0.8 -1.4 hypothetical protein compare
MPMX19_03195 -0.8 -1.7 hypothetical protein compare
MPMX19_01485 -0.8 -5.2 hypothetical protein compare
MPMX19_01278 -0.8 -4.3 NAD(P) transhydrogenase subunit alpha part 1 compare
MPMX19_05719 -0.8 -1.5 hypothetical protein compare
MPMX19_01495 -0.8 -1.3 hypothetical protein compare
MPMX19_02227 -0.8 -6.1 Pyruvate, phosphate dikinase compare
MPMX19_03609 -0.8 -2.0 HTH-type transcriptional repressor NagR compare
MPMX19_02979 -0.8 -2.7 Hydrogen cyanide synthase subunit HcnB compare
MPMX19_04968 -0.8 -1.3 hypothetical protein compare
MPMX19_05454 -0.8 -2.0 hypothetical protein compare
MPMX19_00712 -0.8 -3.3 hypothetical protein compare
MPMX19_03822 -0.8 -1.5 Sulfur carrier protein FdhD compare
MPMX19_00651 -0.8 -3.8 hypothetical protein compare
MPMX19_01084 -0.8 -1.6 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX19_05387 -0.8 -1.4 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
MPMX19_06001 -0.8 -2.3 hypothetical protein compare
MPMX19_04208 -0.8 -2.4 flagellum biosynthesis repressor protein FlbT compare
MPMX19_05034 -0.7 -2.0 ATP synthase subunit c compare
MPMX19_06456 -0.7 -1.0 hypothetical protein compare
MPMX19_02348 -0.7 -1.9 hypothetical protein compare
MPMX19_05162 -0.7 -2.6 Ferrous-iron efflux pump FieF compare
MPMX19_05714 -0.7 -4.1 hypothetical protein compare
MPMX19_05849 -0.7 -1.9 TorCAD operon transcriptional regulatory protein TorR compare
MPMX19_06786 -0.7 -2.0 Formate dehydrogenase, mitochondrial compare
MPMX19_02850 -0.7 -2.0 Glyceraldehyde-3-phosphate dehydrogenase 1 compare
MPMX19_00234 -0.7 -1.7 hypothetical protein compare
MPMX19_05936 -0.7 -2.6 Alpha-galactosidase compare
MPMX19_04093 -0.7 -2.1 hypothetical protein compare
MPMX19_01277 -0.7 -3.5 hypothetical protein compare
MPMX19_01483 -0.7 -4.3 Flagellar basal-body rod protein FlgG compare
MPMX19_01394 -0.7 -1.3 hypothetical protein compare
MPMX19_00864 -0.7 -2.6 Flagellar hook-basal body complex protein FliE compare
MPMX19_03790 -0.7 -1.3 hypothetical protein compare
MPMX19_00872 -0.7 -1.6 hypothetical protein compare
MPMX19_02842 -0.7 -2.4 HTH-type transcriptional repressor RspR compare
MPMX19_05473 -0.7 -2.5 hypothetical protein compare
MPMX19_04199 -0.7 -3.9 Pseudaminic acid synthase compare
MPMX19_00329 -0.7 -2.4 Putative membrane protein insertion efficiency factor compare
MPMX19_02123 -0.7 -1.9 Glycerol-3-phosphate dehydrogenase [NAD(P)+] compare
MPMX19_04869 -0.7 -2.8 DNA polymerase I compare
MPMX19_00904 -0.7 -3.9 DNA repair protein RadA compare
MPMX19_02392 -0.7 -5.5 Aspartate/prephenate aminotransferase compare
MPMX19_04254 -0.7 -2.3 NADP-dependent malic enzyme compare
MPMX19_00867 -0.7 -5.7 Flagellar biosynthetic protein FlhB compare
MPMX19_03050 -0.7 -2.2 hypothetical protein compare
MPMX19_05725 -0.7 -2.0 hypothetical protein compare
MPMX19_05519 -0.7 -4.1 LL-diaminopimelate aminotransferase compare
MPMX19_01729 -0.7 -1.4 Ethylmalonyl-CoA/methylmalonyl-CoA epimerase compare
MPMX19_02177 -0.7 -2.4 Succinylornithine transaminase/acetylornithine aminotransferase compare
MPMX19_01796 -0.7 -1.1 hypothetical protein compare
MPMX19_04569 -0.7 -2.3 Anti-sigma-F factor NrsF compare
MPMX19_06966 -0.7 -2.0 hypothetical protein compare
MPMX19_04341 -0.7 -1.9 hypothetical protein compare
MPMX19_04204 -0.7 -3.7 D-alanine--D-alanyl carrier protein ligase compare
MPMX19_00854 -0.6 -5.7 hypothetical protein compare
MPMX19_02171 -0.6 -3.2 putative ABC transporter ATP-binding protein YejF compare
MPMX19_00211 -0.6 -3.0 putative copper-importing P-type ATPase A compare
MPMX19_03654 -0.6 -1.1 Fructokinase compare
MPMX19_06141 -0.6 -1.4 Intermembrane phospholipid transport system permease protein MlaE compare
MPMX19_00311 -0.6 -5.2 hypothetical protein compare
MPMX19_00790 -0.6 -1.3 hypothetical protein compare
MPMX19_03975 -0.6 -1.8 Putative thiosulfate sulfurtransferase compare
MPMX19_04474 -0.6 -2.4 hypothetical protein compare
MPMX19_03892 -0.6 -2.8 HTH-type transcriptional repressor NanR compare
MPMX19_05011 -0.6 -2.4 tRNA (cytidine(34)-2'-O)-methyltransferase compare
MPMX19_06506 -0.6 -1.4 hypothetical protein compare
MPMX19_00046 -0.6 -1.0 hypothetical protein compare
MPMX19_03367 -0.6 -1.9 Magnetosome membrane protein 22 compare
MPMX19_01955 -0.6 -0.9 Putative anti-sigma factor antagonist compare
MPMX19_03819 -0.6 -2.5 NADP-reducing hydrogenase subunit HndA compare
MPMX19_02128 -0.6 -2.6 Lipopolysaccharide assembly protein B compare
MPMX19_01276 -0.6 -4.0 NAD(P) transhydrogenase subunit beta compare
MPMX19_01652 -0.6 -1.9 hypothetical protein compare
MPMX19_05726 -0.6 -1.2 hypothetical protein compare
MPMX19_00862 -0.6 -3.7 hypothetical protein compare
MPMX19_02668 -0.6 -3.6 RNA polymerase sigma-54 factor 2 compare
MPMX19_03298 -0.6 -1.1 hypothetical protein compare
MPMX19_04430 -0.6 -2.0 hypothetical protein compare
MPMX19_00061 -0.6 -1.5 L-lysine 2,3-aminomutase compare
MPMX19_05601 -0.6 -1.8 putative ABC transporter ATP-binding protein YejF compare
MPMX19_00695 -0.6 -1.1 putative transcriptional regulatory protein compare
MPMX19_06337 -0.6 -2.1 Arsenic resistance transcriptional regulator ArsR1 compare
MPMX19_05389 -0.6 -2.0 Pyruvate kinase compare
MPMX19_02601 -0.6 -2.7 hypothetical protein compare
MPMX19_03002 -0.6 -2.8 hypothetical protein compare
MPMX19_01876 -0.6 -2.7 Sensor histidine kinase RcsC compare
MPMX19_01614 -0.6 -1.6 hypothetical protein compare
MPMX19_00344 -0.6 -1.4 hypothetical protein compare
MPMX19_04759 -0.6 -1.9 HTH-type transcriptional regulator LutR compare
MPMX19_05762 -0.6 -1.6 hypothetical protein compare
MPMX19_00634 -0.6 -3.7 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nln experiments