Experiment set1S95 for Azospirillum sp. SherDot2

Compare to:

NLN

200 most important genes:

  gene name fitness t score description  
MPMX19_03906 -3.9 -9.5 Pca regulon regulatory protein compare
MPMX19_02267 -3.0 -3.9 hypothetical protein compare
MPMX19_02320 -2.7 -2.6 HTH-type transcriptional regulator GltR compare
MPMX19_06275 -2.6 -14.0 Argininosuccinate lyase compare
MPMX19_02268 -2.4 -6.3 hypothetical protein compare
MPMX19_00128 -2.3 -15.6 hypothetical protein compare
MPMX19_01376 -2.2 -1.5 hypothetical protein compare
MPMX19_01630 -2.2 -4.4 Phosphoribosylamine--glycine ligase compare
MPMX19_02658 -2.2 -12.2 Glutamate synthase [NADPH] small chain compare
MPMX19_02657 -2.1 -16.0 Glutamate synthase [NADPH] large chain compare
MPMX19_06277 -2.1 -11.8 hypothetical protein compare
MPMX19_01054 -2.1 -6.5 Aspartate carbamoyltransferase compare
MPMX19_00126 -2.0 -3.6 hypothetical protein compare
MPMX19_05727 -2.0 -6.9 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX19_00606 -2.0 -9.5 3-isopropylmalate dehydratase small subunit 1 compare
MPMX19_02543 -2.0 -3.4 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX19_02980 -1.9 -2.5 Hydrogen cyanide synthase subunit HcnA compare
MPMX19_00705 -1.9 -5.3 Cell division coordinator CpoB compare
MPMX19_01714 -1.8 -2.8 tRNA-modifying protein YgfZ compare
MPMX19_01998 -1.8 -8.2 3-isopropylmalate dehydratase large subunit compare
MPMX19_02981 -1.8 -6.3 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_03948 -1.8 -2.0 tRNA-Ser compare
MPMX19_01545 -1.7 -3.7 Lon protease compare
MPMX19_00635 -1.7 -10.3 5,10-methylenetetrahydrofolate reductase compare
MPMX19_01084 -1.6 -2.9 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX19_00530 -1.6 -2.6 Orotate phosphoribosyltransferase compare
MPMX19_02618 -1.6 -2.4 Transcriptional regulatory protein BaeR compare
MPMX19_00906 -1.6 -8.5 Amidophosphoribosyltransferase compare
MPMX19_01777 -1.5 -7.1 2-aminoadipate transaminase compare
MPMX19_05690 -1.5 -7.1 Protein phosphotransferase ChpT compare
MPMX19_04161 -1.5 -2.6 hypothetical protein compare
MPMX19_01560 -1.5 -4.1 3'-5' exonuclease DinG compare
MPMX19_02162 -1.5 -10.2 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX19_01364 -1.5 -10.9 O-succinylhomoserine sulfhydrylase compare
MPMX19_01015 -1.5 -1.9 Anthranilate phosphoribosyltransferase compare
MPMX19_05719 -1.5 -2.8 hypothetical protein compare
MPMX19_04391 -1.4 -6.0 Homoserine O-acetyltransferase compare
MPMX19_00262 -1.4 -2.8 Thiazole synthase compare
MPMX19_00066 -1.4 -2.0 hypothetical protein compare
MPMX19_05725 -1.4 -3.8 hypothetical protein compare
MPMX19_03959 -1.4 -2.4 hypothetical protein compare
MPMX19_01053 -1.4 -3.3 Dihydroorotase compare
MPMX19_02207 -1.4 -0.9 N-(5'-phosphoribosyl)anthranilate isomerase compare
MPMX19_01883 -1.3 -3.2 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_05997 -1.3 -3.1 hypothetical protein compare
MPMX19_00607 -1.3 -8.2 3-isopropylmalate dehydrogenase compare
MPMX19_00478 -1.3 -2.0 putative protein RP812 compare
MPMX19_01822 -1.3 -6.9 2-isopropylmalate synthase compare
MPMX19_05044 -1.3 -2.1 hypothetical protein compare
MPMX19_00693 -1.3 -5.7 5-formyltetrahydrofolate cyclo-ligase compare
MPMX19_06808 -1.3 -2.7 HTH-type transcriptional regulator DmlR compare
MPMX19_01014 -1.3 -2.0 Indole-3-glycerol phosphate synthase compare
MPMX19_05119 -1.3 -9.4 Glucose-6-phosphate 1-dehydrogenase compare
MPMX19_00653 -1.2 -5.1 hypothetical protein compare
MPMX19_02736 -1.2 -3.0 Tryptophan synthase beta chain compare
MPMX19_01884 -1.2 -1.3 Phosphoribosylformylglycinamidine synthase subunit PurQ compare
MPMX19_06050 -1.2 -10.1 Phosphoenolpyruvate carboxylase compare
MPMX19_02504 -1.2 -4.0 hypothetical protein compare
MPMX19_02675 -1.2 -9.3 Phosphoenolpyruvate-dependent phosphotransferase system compare
MPMX19_06144 -1.2 -3.2 hypothetical protein compare
MPMX19_01610 -1.2 -1.7 ATP-dependent DNA helicase PcrA compare
MPMX19_01304 -1.1 -5.2 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX19_05575 -1.1 -2.9 hypothetical protein compare
MPMX19_00260 -1.1 -2.3 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_01277 -1.1 -5.3 hypothetical protein compare
MPMX19_00648 -1.1 -6.9 Sulfate adenylyltransferase subunit 2 compare
MPMX19_02227 -1.1 -8.4 Pyruvate, phosphate dikinase compare
MPMX19_00649 -1.1 -3.9 Phosphoadenosine phosphosulfate reductase compare
MPMX19_06001 -1.1 -3.3 hypothetical protein compare
MPMX19_04093 -1.1 -2.9 hypothetical protein compare
MPMX19_01377 -1.1 -2.8 Outer membrane protein assembly factor BamA compare
MPMX19_00208 -1.1 -2.7 hypothetical protein compare
MPMX19_00652 -1.1 -9.0 Sulfite reductase [ferredoxin] compare
MPMX19_04392 -1.1 -2.0 Bifunctional methionine biosynthesis protein MetXA/MetW compare
MPMX19_04000 -1.1 -3.5 Flagellar motor switch protein FliG compare
MPMX19_02177 -1.1 -3.7 Succinylornithine transaminase/acetylornithine aminotransferase compare
MPMX19_04968 -1.0 -1.8 hypothetical protein compare
MPMX19_00838 -1.0 -2.4 GTP pyrophosphokinase rsh compare
MPMX19_06546 -1.0 -1.8 hypothetical protein compare
MPMX19_06520 -1.0 -2.3 Nitrate import ATP-binding protein NrtC compare
MPMX19_03916 -1.0 -2.0 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
MPMX19_00650 -1.0 -5.5 Siroheme synthase compare
MPMX19_01486 -1.0 -5.0 Flagellar L-ring protein compare
MPMX19_02979 -1.0 -3.4 Hydrogen cyanide synthase subunit HcnB compare
MPMX19_00170 -1.0 -2.3 hypothetical protein compare
MPMX19_00142 -0.9 -1.9 hypothetical protein compare
MPMX19_06786 -0.9 -2.7 Formate dehydrogenase, mitochondrial compare
MPMX19_00689 -0.9 -2.5 Glyceraldehyde-3-phosphate dehydrogenase 1 compare
MPMX19_03123 -0.9 -2.0 Citrate lyase acyl carrier protein compare
MPMX19_04206 -0.9 -3.4 3-oxoacyl-[acyl-carrier-protein] synthase 3 compare
MPMX19_00651 -0.9 -4.8 hypothetical protein compare
MPMX19_00858 -0.9 -3.5 Flagellar biosynthetic protein FliP compare
MPMX19_00647 -0.9 -6.7 Bifunctional enzyme CysN/CysC compare
MPMX19_00862 -0.9 -5.4 hypothetical protein compare
MPMX19_04087 -0.9 -2.9 Flagellum site-determining protein YlxH compare
MPMX19_06150 -0.9 -3.2 Corrinoid adenosyltransferase compare
MPMX19_00866 -0.9 -5.0 Flagellar biosynthetic protein FliR compare
MPMX19_01243 -0.8 -1.6 hypothetical protein compare
MPMX19_00144 -0.8 -3.1 hypothetical protein compare
MPMX19_02392 -0.8 -6.9 Aspartate/prephenate aminotransferase compare
MPMX19_02511 -0.8 -1.5 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase compare
MPMX19_06539 -0.8 -1.8 hypothetical protein compare
MPMX19_00319 -0.8 -1.1 hypothetical protein compare
MPMX19_02516 -0.8 -2.9 hypothetical protein compare
MPMX19_00912 -0.8 -6.2 Bifunctional uridylyltransferase/uridylyl-removing enzyme compare
MPMX19_06577 -0.8 -5.8 hypothetical protein compare
MPMX19_00503 -0.8 -2.7 ATP-dependent Clp protease ATP-binding subunit ClpA compare
MPMX19_02613 -0.8 -1.8 hypothetical protein compare
MPMX19_04636 -0.8 -2.2 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_03859 -0.8 -1.9 hypothetical protein compare
MPMX19_02668 -0.8 -4.8 RNA polymerase sigma-54 factor 2 compare
MPMX19_01249 -0.8 -2.4 Periplasmic serine endoprotease DegP compare
MPMX19_01485 -0.8 -5.2 hypothetical protein compare
MPMX19_06916 -0.8 -2.0 Crotonyl-CoA hydratase compare
MPMX19_02084 -0.8 -1.5 hypothetical protein compare
MPMX19_00864 -0.8 -3.0 Flagellar hook-basal body complex protein FliE compare
MPMX19_00344 -0.8 -1.4 hypothetical protein compare
MPMX19_06580 -0.8 -3.6 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_00867 -0.8 -6.4 Flagellar biosynthetic protein FlhB compare
MPMX19_02234 -0.8 -2.3 hypothetical protein compare
MPMX19_01483 -0.8 -4.7 Flagellar basal-body rod protein FlgG compare
MPMX19_03924 -0.8 -1.9 hypothetical protein compare
MPMX19_00263 -0.7 -1.6 hypothetical protein compare
MPMX19_04326 -0.7 -2.9 Beta-hexosaminidase compare
MPMX19_06123 -0.7 -1.6 hypothetical protein compare
MPMX19_04825 -0.7 -1.8 hypothetical protein compare
MPMX19_06141 -0.7 -1.7 Intermembrane phospholipid transport system permease protein MlaE compare
MPMX19_06579 -0.7 -1.8 Carnitine monooxygenase oxygenase subunit compare
MPMX19_02551 -0.7 -1.7 hypothetical protein compare
MPMX19_01494 -0.7 -4.3 Flagellar P-ring protein compare
MPMX19_04864 -0.7 -1.9 hypothetical protein compare
MPMX19_05678 -0.7 -3.6 hypothetical protein compare
MPMX19_01067 -0.7 -1.6 hypothetical protein compare
MPMX19_00863 -0.7 -4.3 Flagellar basal-body rod protein FlgC compare
MPMX19_05921 -0.7 -1.2 hypothetical protein compare
MPMX19_05272 -0.7 -2.2 hypothetical protein compare
MPMX19_04222 -0.7 -5.4 hypothetical protein compare
MPMX19_01939 -0.7 -2.6 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
MPMX19_03452 -0.7 -2.1 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_03195 -0.7 -1.4 hypothetical protein compare
MPMX19_04200 -0.7 -3.5 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase compare
MPMX19_02402 -0.7 -1.4 hypothetical protein compare
MPMX19_00976 -0.7 -1.6 ATP-dependent RNA helicase RhlE compare
MPMX19_02031 -0.7 -1.4 tRNA (cytidine/uridine/adenosine-2'-O-)-methyltransferase TrmJ compare
MPMX19_02379 -0.7 -2.8 hypothetical protein compare
MPMX19_06395 -0.7 -2.0 Inner membrane protein YqaA compare
MPMX19_03870 -0.7 -1.5 L-aspartate dehydrogenase compare
MPMX19_04551 -0.7 -1.2 HTH-type transcriptional repressor RspR compare
MPMX19_05070 -0.7 -3.2 hypothetical protein compare
MPMX19_02916 -0.7 -2.5 hypothetical protein compare
MPMX19_03492 -0.7 -2.2 3'-5' exonuclease DinG compare
MPMX19_05714 -0.7 -3.9 hypothetical protein compare
MPMX19_06723 -0.7 -2.5 hypothetical protein compare
MPMX19_06545 -0.7 -5.6 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase compare
MPMX19_04682 -0.6 -1.0 hypothetical protein compare
MPMX19_03693 -0.6 -2.0 hypothetical protein compare
MPMX19_00813 -0.6 -1.4 HTH-type transcriptional regulator CysL compare
MPMX19_05519 -0.6 -4.1 LL-diaminopimelate aminotransferase compare
MPMX19_03369 -0.6 -1.9 hypothetical protein compare
MPMX19_05670 -0.6 -4.1 Quinolinate synthase A compare
MPMX19_06544 -0.6 -5.0 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) compare
MPMX19_01496 -0.6 -4.0 hypothetical protein compare
MPMX19_06230 -0.6 -1.7 hypothetical protein compare
MPMX19_01497 -0.6 -1.8 hypothetical protein compare
MPMX19_00061 -0.6 -1.8 L-lysine 2,3-aminomutase compare
MPMX19_06334 -0.6 -2.3 Arsenite oxidase subunit AioB compare
MPMX19_03654 -0.6 -1.3 Fructokinase compare
MPMX19_00160 -0.6 -2.6 hypothetical protein compare
MPMX19_06345 -0.6 -2.5 Pyruvate synthase subunit PorC compare
MPMX19_00714 -0.6 -3.3 Ferrous-iron efflux pump FieF compare
MPMX19_01276 -0.6 -4.1 NAD(P) transhydrogenase subunit beta compare
MPMX19_03816 -0.6 -1.3 hypothetical protein compare
MPMX19_04535 -0.6 -1.9 Maleate isomerase compare
MPMX19_00311 -0.6 -5.1 hypothetical protein compare
MPMX19_04430 -0.6 -2.0 hypothetical protein compare
MPMX19_02866 -0.6 -2.1 4-hydroxymandelate oxidase compare
MPMX19_01321 -0.6 -2.1 tRNA-Cys compare
MPMX19_02927 -0.6 -2.1 5,6,7,8-tetrahydromethanopterin hydro-lyase compare
MPMX19_00572 -0.6 -2.2 Type-4 uracil-DNA glycosylase compare
MPMX19_03790 -0.6 -1.1 hypothetical protein compare
MPMX19_02123 -0.6 -1.8 Glycerol-3-phosphate dehydrogenase [NAD(P)+] compare
MPMX19_04933 -0.6 -2.6 hypothetical protein compare
MPMX19_06985 -0.6 -1.3 L-malyl-CoA/beta-methylmalyl-CoA lyase compare
MPMX19_05680 -0.6 -2.4 Cell cycle response regulator CtrA compare
MPMX19_00978 -0.6 -1.9 hypothetical protein compare
MPMX19_03295 -0.6 -1.4 HTH-type transcriptional regulator McbR compare
MPMX19_00854 -0.6 -5.1 hypothetical protein compare
MPMX19_00634 -0.6 -3.6 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial compare
MPMX19_06668 -0.6 -3.4 2-deoxystreptamine glucosyltransferase compare
MPMX19_04204 -0.6 -3.4 D-alanine--D-alanyl carrier protein ligase compare
MPMX19_00632 -0.6 -1.6 Intermembrane phospholipid transport system binding protein MlaC compare
MPMX19_04092 -0.6 -3.4 Flagellar motor switch protein FliN compare
MPMX19_03050 -0.6 -2.0 hypothetical protein compare
MPMX19_06863 -0.6 -2.3 hypothetical protein compare
MPMX19_04139 -0.6 -2.2 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase compare
MPMX19_05429 -0.6 -2.6 Riboflavin transporter RibZ compare
MPMX19_04669 -0.6 -1.6 Glucose 1-dehydrogenase compare
MPMX19_00790 -0.5 -1.4 hypothetical protein compare
MPMX19_06236 -0.5 -1.5 hypothetical protein compare
MPMX19_03557 -0.5 -2.2 HTH-type transcriptional regulator CynR compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nln experiments