Experiment set1S93 for Azospirillum sp. SherDot2

Compare to:

NLN

200 most important genes:

  gene name fitness t score description  
MPMX19_03906 -4.1 -11.5 Pca regulon regulatory protein compare
MPMX19_02267 -4.1 -2.8 hypothetical protein compare
MPMX19_01053 -2.8 -4.9 Dihydroorotase compare
MPMX19_00126 -2.6 -5.3 hypothetical protein compare
MPMX19_00260 -2.6 -4.0 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_02543 -2.6 -4.0 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX19_02658 -2.5 -13.9 Glutamate synthase [NADPH] small chain compare
MPMX19_01630 -2.5 -5.0 Phosphoribosylamine--glycine ligase compare
MPMX19_02268 -2.5 -7.2 hypothetical protein compare
MPMX19_00128 -2.4 -16.9 hypothetical protein compare
MPMX19_02657 -2.4 -18.1 Glutamate synthase [NADPH] large chain compare
MPMX19_06275 -2.4 -14.6 Argininosuccinate lyase compare
MPMX19_00838 -2.3 -4.2 GTP pyrophosphokinase rsh compare
MPMX19_02981 -2.3 -7.5 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_05727 -2.3 -8.1 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX19_01054 -2.3 -7.0 Aspartate carbamoyltransferase compare
MPMX19_01560 -2.2 -5.1 3'-5' exonuclease DinG compare
MPMX19_00705 -2.2 -6.4 Cell division coordinator CpoB compare
MPMX19_06277 -2.1 -12.2 hypothetical protein compare
MPMX19_01376 -2.1 -2.4 hypothetical protein compare
MPMX19_01364 -2.0 -14.7 O-succinylhomoserine sulfhydrylase compare
MPMX19_04391 -2.0 -7.4 Homoserine O-acetyltransferase compare
MPMX19_00635 -1.9 -12.0 5,10-methylenetetrahydrofolate reductase compare
MPMX19_00649 -1.9 -6.2 Phosphoadenosine phosphosulfate reductase compare
MPMX19_00607 -1.9 -11.6 3-isopropylmalate dehydrogenase compare
MPMX19_04392 -1.9 -3.3 Bifunctional methionine biosynthesis protein MetXA/MetW compare
MPMX19_00653 -1.8 -7.4 hypothetical protein compare
MPMX19_00606 -1.8 -9.5 3-isopropylmalate dehydratase small subunit 1 compare
MPMX19_01015 -1.8 -1.7 Anthranilate phosphoribosyltransferase compare
MPMX19_01884 -1.8 -1.2 Phosphoribosylformylglycinamidine synthase subunit PurQ compare
MPMX19_00906 -1.7 -9.5 Amidophosphoribosyltransferase compare
MPMX19_00694 -1.7 -4.0 2',3'-cyclic-nucleotide 2'-phosphodiesterase compare
MPMX19_00693 -1.7 -7.5 5-formyltetrahydrofolate cyclo-ligase compare
MPMX19_01998 -1.7 -8.5 3-isopropylmalate dehydratase large subunit compare
MPMX19_02162 -1.7 -12.1 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX19_01304 -1.7 -7.3 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX19_00651 -1.7 -8.4 hypothetical protein compare
MPMX19_01822 -1.7 -8.9 2-isopropylmalate synthase compare
MPMX19_01777 -1.7 -8.0 2-aminoadipate transaminase compare
MPMX19_02227 -1.6 -12.2 Pyruvate, phosphate dikinase compare
MPMX19_00652 -1.6 -13.0 Sulfite reductase [ferredoxin] compare
MPMX19_06050 -1.6 -12.9 Phosphoenolpyruvate carboxylase compare
MPMX19_00262 -1.5 -2.1 Thiazole synthase compare
MPMX19_01883 -1.5 -3.6 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_02674 -1.5 -3.2 NADH:quinone reductase compare
MPMX19_05119 -1.5 -11.0 Glucose-6-phosphate 1-dehydrogenase compare
MPMX19_00650 -1.4 -7.8 Siroheme synthase compare
MPMX19_00648 -1.4 -8.8 Sulfate adenylyltransferase subunit 2 compare
MPMX19_02207 -1.4 -1.2 N-(5'-phosphoribosyl)anthranilate isomerase compare
MPMX19_02618 -1.3 -2.1 Transcriptional regulatory protein BaeR compare
MPMX19_00530 -1.3 -3.1 Orotate phosphoribosyltransferase compare
MPMX19_05575 -1.3 -3.5 hypothetical protein compare
MPMX19_03654 -1.3 -2.9 Fructokinase compare
MPMX19_04208 -1.2 -3.3 flagellum biosynthesis repressor protein FlbT compare
MPMX19_01149 -1.2 -5.8 Polyphosphate kinase compare
MPMX19_00647 -1.2 -9.5 Bifunctional enzyme CysN/CysC compare
MPMX19_02736 -1.2 -4.0 Tryptophan synthase beta chain compare
MPMX19_02303 -1.2 -2.9 hypothetical protein compare
MPMX19_00503 -1.2 -4.0 ATP-dependent Clp protease ATP-binding subunit ClpA compare
MPMX19_03724 -1.2 -2.0 hypothetical protein compare
MPMX19_05023 -1.2 -1.7 hypothetical protein compare
MPMX19_00680 -1.2 -2.3 Elongation factor P--(R)-beta-lysine ligase compare
MPMX19_02675 -1.2 -9.5 Phosphoenolpyruvate-dependent phosphotransferase system compare
MPMX19_02504 -1.1 -4.4 hypothetical protein compare
MPMX19_02980 -1.1 -1.6 Hydrogen cyanide synthase subunit HcnA compare
MPMX19_06150 -1.1 -4.5 Corrinoid adenosyltransferase compare
MPMX19_04145 -1.1 -1.9 hypothetical protein compare
MPMX19_01545 -1.1 -2.9 Lon protease compare
MPMX19_01714 -1.1 -2.1 tRNA-modifying protein YgfZ compare
MPMX19_02392 -1.0 -8.7 Aspartate/prephenate aminotransferase compare
MPMX19_06546 -1.0 -2.3 hypothetical protein compare
MPMX19_02801 -1.0 -1.9 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_04968 -1.0 -1.9 hypothetical protein compare
MPMX19_06746 -1.0 -1.3 Chemotaxis protein CheW compare
MPMX19_02937 -1.0 -2.1 hypothetical protein compare
MPMX19_05725 -0.9 -3.1 hypothetical protein compare
MPMX19_02536 -0.9 -3.0 hypothetical protein compare
MPMX19_01499 -0.9 -2.8 hypothetical protein compare
MPMX19_02181 -0.9 -3.4 hypothetical protein compare
MPMX19_01014 -0.9 -1.5 Indole-3-glycerol phosphate synthase compare
MPMX19_00695 -0.9 -2.2 putative transcriptional regulatory protein compare
MPMX19_00152 -0.9 -1.8 hypothetical protein compare
MPMX19_01084 -0.9 -2.1 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX19_06373 -0.9 -2.2 Lipoprotein signal peptidase compare
MPMX19_00266 -0.9 -2.2 hypothetical protein compare
MPMX19_00912 -0.9 -6.8 Bifunctional uridylyltransferase/uridylyl-removing enzyme compare
MPMX19_06253 -0.9 -2.1 hypothetical protein compare
MPMX19_05680 -0.9 -3.6 Cell cycle response regulator CtrA compare
MPMX19_00852 -0.8 -1.8 hypothetical protein compare
MPMX19_03123 -0.8 -1.9 Citrate lyase acyl carrier protein compare
MPMX19_06001 -0.8 -2.8 hypothetical protein compare
MPMX19_04087 -0.8 -2.5 Flagellum site-determining protein YlxH compare
MPMX19_01454 -0.8 -2.2 hypothetical protein compare
MPMX19_01125 -0.8 -1.8 hypothetical protein compare
MPMX19_04000 -0.8 -3.2 Flagellar motor switch protein FliG compare
MPMX19_05519 -0.8 -5.4 LL-diaminopimelate aminotransferase compare
MPMX19_00858 -0.8 -3.8 Flagellar biosynthetic protein FliP compare
MPMX19_01718 -0.8 -2.0 Ribosomal large subunit pseudouridine synthase C compare
MPMX19_01703 -0.8 -1.8 hypothetical protein compare
MPMX19_02973 -0.8 -2.1 3-oxo-isoapionate-4-phosphate transcarboxylase/hydrolase compare
MPMX19_00835 -0.8 -4.7 D-erythronate 4-phosphate dehydrogenase compare
MPMX19_01495 -0.8 -1.4 hypothetical protein compare
MPMX19_06102 -0.8 -2.3 Membrane-bound lytic murein transglycosylase C compare
MPMX19_00866 -0.8 -4.4 Flagellar biosynthetic protein FliR compare
MPMX19_03096 -0.8 -1.6 hypothetical protein compare
MPMX19_00144 -0.8 -3.0 hypothetical protein compare
MPMX19_02085 -0.8 -2.9 hypothetical protein compare
MPMX19_02177 -0.8 -3.1 Succinylornithine transaminase/acetylornithine aminotransferase compare
MPMX19_00748 -0.7 -2.3 Organic hydroperoxide resistance transcriptional regulator compare
MPMX19_01394 -0.7 -1.1 hypothetical protein compare
MPMX19_02668 -0.7 -4.8 RNA polymerase sigma-54 factor 2 compare
MPMX19_05690 -0.7 -3.9 Protein phosphotransferase ChpT compare
MPMX19_03612 -0.7 -2.5 hypothetical protein compare
MPMX19_03504 -0.7 -2.1 Sulfur carrier protein FdhD compare
MPMX19_01067 -0.7 -1.9 hypothetical protein compare
MPMX19_05534 -0.7 -1.4 DNA gyrase inhibitor YacG compare
MPMX19_02136 -0.7 -1.2 Phage shock protein A compare
MPMX19_00862 -0.7 -4.6 hypothetical protein compare
MPMX19_02927 -0.7 -2.6 5,6,7,8-tetrahydromethanopterin hydro-lyase compare
MPMX19_01729 -0.7 -2.3 Ethylmalonyl-CoA/methylmalonyl-CoA epimerase compare
MPMX19_05449 -0.7 -2.5 hypothetical protein compare
MPMX19_03976 -0.7 -2.7 hypothetical protein compare
MPMX19_04759 -0.7 -2.4 HTH-type transcriptional regulator LutR compare
MPMX19_00863 -0.7 -4.7 Flagellar basal-body rod protein FlgC compare
MPMX19_00156 -0.7 -3.1 hypothetical protein compare
MPMX19_01276 -0.7 -4.9 NAD(P) transhydrogenase subunit beta compare
MPMX19_00909 -0.7 -3.6 hypothetical protein compare
MPMX19_00304 -0.7 -2.3 Phosphatidylcholine synthase compare
MPMX19_00181 -0.7 -2.8 hypothetical protein compare
MPMX19_03800 -0.7 -2.1 hypothetical protein compare
MPMX19_02979 -0.7 -2.5 Hydrogen cyanide synthase subunit HcnB compare
MPMX19_01559 -0.7 -2.5 hypothetical protein compare
MPMX19_00689 -0.7 -2.1 Glyceraldehyde-3-phosphate dehydrogenase 1 compare
MPMX19_06663 -0.7 -5.0 Ubiquinone biosynthesis O-methyltransferase, mitochondrial compare
MPMX19_05452 -0.7 -3.1 hypothetical protein compare
MPMX19_01277 -0.7 -3.6 hypothetical protein compare
MPMX19_06768 -0.7 -1.8 hypothetical protein compare
MPMX19_02779 -0.7 -1.6 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_03819 -0.7 -2.6 NADP-reducing hydrogenase subunit HndA compare
MPMX19_01278 -0.7 -3.9 NAD(P) transhydrogenase subunit alpha part 1 compare
MPMX19_01485 -0.6 -4.6 hypothetical protein compare
MPMX19_03200 -0.6 -3.1 Transcriptional regulatory protein LiaR compare
MPMX19_01494 -0.6 -3.8 Flagellar P-ring protein compare
MPMX19_00976 -0.6 -1.6 ATP-dependent RNA helicase RhlE compare
MPMX19_06723 -0.6 -2.5 hypothetical protein compare
MPMX19_01367 -0.6 -1.9 Protein YhfA compare
MPMX19_00180 -0.6 -3.9 hypothetical protein compare
MPMX19_05459 -0.6 -1.6 hypothetical protein compare
MPMX19_00142 -0.6 -1.2 hypothetical protein compare
MPMX19_05177 -0.6 -2.0 Glyoxylate/hydroxypyruvate reductase A compare
MPMX19_05670 -0.6 -4.3 Quinolinate synthase A compare
MPMX19_02769 -0.6 -2.3 Ribokinase compare
MPMX19_04985 -0.6 -1.0 HTH-type transcriptional regulator DmlR compare
MPMX19_00867 -0.6 -5.3 Flagellar biosynthetic protein FlhB compare
MPMX19_02646 -0.6 -1.6 hypothetical protein compare
MPMX19_01111 -0.6 -1.9 Sensory histidine kinase/phosphatase NtrB compare
MPMX19_05747 -0.6 -1.2 Transcriptional regulatory protein DegU compare
MPMX19_06887 -0.6 -1.6 Adenine deaminase compare
MPMX19_06309 -0.6 -2.1 hypothetical protein compare
MPMX19_00134 -0.6 -2.4 hypothetical protein compare
MPMX19_00712 -0.6 -2.9 hypothetical protein compare
MPMX19_04835 -0.6 -1.4 hypothetical protein compare
MPMX19_03526 -0.6 -2.5 Quinate/shikimate dehydrogenase (NAD(+)) compare
MPMX19_03252 -0.6 -2.5 hypothetical protein compare
MPMX19_06641 -0.6 -5.0 Ubiquinone biosynthesis O-methyltransferase, mitochondrial compare
MPMX19_05687 -0.6 -2.8 Chemotaxis protein CheW compare
MPMX19_02424 -0.6 -3.0 hypothetical protein compare
MPMX19_00005 -0.6 -1.3 hypothetical protein compare
MPMX19_03653 -0.6 -3.7 Mannitol 2-dehydrogenase compare
MPMX19_01484 -0.6 -2.8 Flagellar basal-body rod protein FlgG compare
MPMX19_04362 -0.6 -1.2 Cytidine deaminase compare
MPMX19_04093 -0.6 -1.9 hypothetical protein compare
MPMX19_04390 -0.6 -1.4 hypothetical protein compare
MPMX19_00904 -0.6 -3.6 DNA repair protein RadA compare
MPMX19_04149 -0.6 -1.7 hypothetical protein compare
MPMX19_03257 -0.6 -2.1 Glycine betaine/proline betaine transport system ATP-binding protein ProV compare
MPMX19_00860 -0.6 -1.5 hypothetical protein compare
MPMX19_06789 -0.6 -1.4 Octopine catabolism/uptake operon regulatory protein OccR compare
MPMX19_03019 -0.6 -2.2 hypothetical protein compare
MPMX19_05714 -0.6 -3.6 hypothetical protein compare
MPMX19_05862 -0.6 -2.3 3-carboxy-cis,cis-muconate cycloisomerase compare
MPMX19_06144 -0.6 -1.9 hypothetical protein compare
MPMX19_00237 -0.6 -2.3 Cysteine synthase compare
MPMX19_01365 -0.6 -1.1 hypothetical protein compare
MPMX19_00236 -0.6 -1.6 HTH-type transcriptional regulator IscR compare
MPMX19_04995 -0.6 -2.6 D-alanine aminotransferase compare
MPMX19_01486 -0.6 -3.2 Flagellar L-ring protein compare
MPMX19_04449 -0.5 -1.1 Inosine-5'-monophosphate dehydrogenase compare
MPMX19_04200 -0.5 -3.1 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase compare
MPMX19_00221 -0.5 -2.5 hypothetical protein compare
MPMX19_01541 -0.5 -2.2 hypothetical protein compare
MPMX19_00634 -0.5 -3.4 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial compare
MPMX19_05034 -0.5 -1.7 ATP synthase subunit c compare
MPMX19_02553 -0.5 -2.8 Protein-export protein SecB compare
MPMX19_01961 -0.5 -1.7 Small heat shock protein IbpA compare
MPMX19_00334 -0.5 -1.2 hypothetical protein compare
MPMX19_00297 -0.5 -0.7 4-carboxy-4-hydroxy-2-oxoadipate aldolase compare
MPMX19_01377 -0.5 -1.6 Outer membrane protein assembly factor BamA compare
MPMX19_04240 -0.5 -2.0 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_00311 -0.5 -4.6 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nln experiments