Experiment set1S91 for Brevundimonas sp. GW460-12-10-14-LB2

Compare to:

Tween 20 carbon source, 30C

200 most important genes:

  gene name fitness t score description  
A4249_RS11920 -5.4 -12.1 ornithine carbamoyltransferase compare
A4249_RS00375 -5.3 -32.4 acyl-CoA dehydrogenase C-terminal domain-containing protein compare
A4249_RS12965 -5.3 -16.4 acetylglutamate kinase compare
A4249_RS16995 -5.1 -15.0 phosphoglycerate dehydrogenase compare
A4249_RS07925 -5.0 -9.0 methylenetetrahydrofolate reductase [NAD(P)H] compare
A4249_RS16125 -4.9 -10.4 glutamate 5-kinase compare
A4249_RS12555 -4.8 -13.5 argininosuccinate lyase compare
A4249_RS09255 -4.8 -4.9 phosphoribosylamine--glycine ligase compare
A4249_RS10695 -4.7 -12.1 histidinol dehydrogenase compare
A4249_RS05920 -4.7 -22.2 N-acetyl-gamma-glutamyl-phosphate reductase compare
A4249_RS05620 -4.7 -21.3 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
A4249_RS14275 -4.6 -25.1 argininosuccinate synthase compare
A4249_RS12605 -4.6 -14.5 acetyl-CoA C-acetyltransferase compare
A4249_RS15305 -4.6 -16.7 sulfate adenylyltransferase subunit CysD compare
A4249_RS06830 -4.6 -4.5 chorismate mutase compare
A4249_RS06230 -4.6 -3.2 OmpH family outer membrane protein compare
A4249_RS07935 -4.6 -23.9 methionine synthase compare
A4249_RS10720 -4.6 -13.1 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
A4249_RS12105 -4.6 -17.3 TonB-dependent receptor compare
A4249_RS10020 -4.5 -15.2 acetolactate synthase 2 catalytic subunit compare
A4249_RS11435 -4.5 -34.5 YdcF family protein compare
A4249_RS10010 -4.5 -10.1 2-isopropylmalate synthase compare
A4249_RS00980 -4.5 -24.4 pyruvate, phosphate dikinase compare
A4249_RS10030 -4.5 -18.6 dihydroxy-acid dehydratase compare
A4249_RS16160 -4.5 -15.2 cystathionine gamma-synthase compare
A4249_RS09840 -4.5 -6.7 pyrroline-5-carboxylate reductase dimerization domain-containing protein compare
A4249_RS12610 -4.5 -20.4 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein compare
A4249_RS08380 -4.4 -9.8 RidA family protein compare
A4249_RS10715 -4.4 -13.5 imidazole glycerol phosphate synthase subunit HisF compare
A4249_RS15290 -4.4 -19.7 malate synthase G compare
A4249_RS00010 -4.4 -6.0 homoserine kinase compare
A4249_RS10000 -4.4 -7.8 3-isopropylmalate dehydratase small subunit compare
A4249_RS14465 -4.4 -13.8 sulfite exporter TauE/SafE family protein compare
A4249_RS11125 -4.3 -29.0 glycosyltransferase family 9 protein compare
A4249_RS00020 -4.3 -17.0 threonine synthase compare
A4249_RS13535 -4.3 -20.5 bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ compare
A4249_RS16110 -4.3 -6.5 NAD(P)-dependent oxidoreductase compare
A4249_RS12545 -4.3 -15.3 diaminopimelate decarboxylase compare
A4249_RS09670 -4.3 -17.8 DUF2849 domain-containing protein compare
A4249_RS12260 -4.2 -4.1 3-hydroxybutyryl-CoA dehydrogenase compare
A4249_RS10005 -4.2 -22.3 3-isopropylmalate dehydratase large subunit compare
A4249_RS09995 -4.2 -14.9 3-isopropylmalate dehydrogenase compare
A4249_RS07930 -4.2 -12.5 homocysteine S-methyltransferase family protein compare
A4249_RS05460 -4.2 -7.8 iron ABC transporter permease compare
A4249_RS02595 -4.2 -22.9 isocitrate lyase compare
A4249_RS15300 -4.1 -17.9 sulfate adenylyltransferase subunit CysN compare
A4249_RS14385 -4.1 -3.9 DUF1318 domain-containing protein compare
A4249_RS10700 -4.1 -10.2 imidazoleglycerol-phosphate dehydratase HisB compare
A4249_RS09675 -4.1 -17.8 siroheme synthase CysG compare
A4249_RS02425 -4.1 -18.8 LL-diaminopimelate aminotransferase compare
A4249_RS16105 -4.0 -19.3 glutamate synthase large subunit compare
A4249_RS15325 -4.0 -15.0 long-chain-acyl-CoA synthetase compare
A4249_RS06835 -4.0 -4.7 prephenate dehydratase domain-containing protein compare
A4249_RS07995 -4.0 -2.7 type II 3-dehydroquinate dehydratase compare
A4249_RS09665 -4.0 -19.8 nitrite/sulfite reductase compare
A4249_RS14585 -4.0 -3.9 glucose-6-phosphate isomerase compare
A4249_RS10025 -4.0 -13.1 ketol-acid reductoisomerase compare
A4249_RS06635 -4.0 -9.5 manganese efflux pump MntP family protein compare
A4249_RS13805 -4.0 -8.1 HAD family hydrolase compare
A4249_RS16165 -3.9 -5.3 homoserine O-succinyltransferase compare
A4249_RS02590 -3.9 -16.6 helix-turn-helix transcriptional regulator compare
A4249_RS10705 -3.9 -7.9 imidazole glycerol phosphate synthase subunit HisH compare
A4249_RS09655 -3.9 -19.4 cysteine synthase A compare
A4249_RS14610 -3.9 -22.5 glycosyltransferase family 39 protein compare
A4249_RS09680 -3.9 -14.9 transcriptional regulator GcvA compare
A4249_RS05455 -3.9 -4.6 ABC transporter substrate-binding protein compare
A4249_RS11560 -3.9 -2.6 peroxiredoxin compare
A4249_RS05625 -3.9 -29.6 ADP-glyceromanno-heptose 6-epimerase compare
A4249_RS05465 -3.8 -6.2 ABC transporter ATP-binding protein compare
A4249_RS09660 -3.8 -8.3 phosphoadenylyl-sulfate reductase compare
A4249_RS10035 -3.8 -11.1 hypothetical protein compare
A4249_RS13640 -3.7 -8.1 molecular chaperone DnaJ compare
A4249_RS10690 -3.7 -12.6 ATP phosphoribosyltransferase compare
A4249_RS10050 -3.7 -8.7 fructose-bisphosphate aldolase class II compare
A4249_RS05870 -3.6 -10.1 ETC complex I subunit compare
A4249_RS09315 -3.5 -5.3 class 1 fructose-bisphosphatase compare
A4249_RS07610 -3.5 -3.7 methyltransferase type 11 compare
A4249_RS13745 -3.5 -10.5 DUF3576 domain-containing protein compare
A4249_RS10805 -3.5 -18.9 ATP-binding protein compare
A4249_RS16120 -3.4 -12.9 glutamate-5-semialdehyde dehydrogenase compare
A4249_RS12825 -3.3 -4.4 SDR family oxidoreductase compare
A4249_RS14605 -3.2 -7.2 glycosyltransferase family 2 protein compare
A4249_RS08255 -3.2 -3.0 serine O-acetyltransferase compare
A4249_RS13750 -3.1 -4.3 hypothetical protein compare
A4249_RS00615 -3.1 -12.2 threonine ammonia-lyase, biosynthetic compare
A4249_RS02905 -3.1 -2.1 tRNA guanosine(34) transglycosylase Tgt compare
A4249_RS10710 -3.0 -1.5 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
A4249_RS11450 -3.0 -7.4 histidinol-phosphate transaminase compare
A4249_RS08595 -3.0 -6.9 ABC transporter ATP-binding protein compare
A4249_RS13590 -2.9 -10.2 [protein-PII] uridylyltransferase compare
A4249_RS04080 -2.9 -4.4 M48 family metalloprotease compare
A4249_RS01460 -2.9 -4.7 signal peptide peptidase SppA compare
A4249_RS09285 -2.9 -6.6 Tat pathway signal sequence domain protein compare
A4249_RS13800 -2.9 -27.6 AGE family epimerase/isomerase compare
A4249_RS09250 -2.9 -4.3 murein L,D-transpeptidase catalytic domain family protein compare
A4249_RS08855 -2.9 -5.3 L,D-transpeptidase family protein compare
A4249_RS07940 -2.8 -6.2 hypothetical protein compare
A4249_RS09275 -2.8 -7.0 DUF3035 domain-containing protein compare
A4249_RS08600 -2.7 -4.7 ABC transporter permease compare
A4249_RS13190 -2.7 -5.8 2-oxo acid dehydrogenase subunit E2 compare
A4249_RS12470 -2.7 -2.5 histidinol-phosphatase compare
A4249_RS08410 -2.7 -19.5 D-alanyl-D-alanine carboxypeptidase family protein compare
A4249_RS15505 -2.7 -9.8 DUF3617 family protein compare
A4249_RS14255 -2.7 -1.3 ribonuclease P protein component compare
A4249_RS07305 -2.7 -4.5 UPF0262 family protein compare
A4249_RS13175 -2.6 -2.6 Rrf2 family transcriptional regulator compare
A4249_RS10255 -2.6 -8.7 cysteine synthase A compare
A4249_RS02510 -2.6 -5.7 L-threonine 3-dehydrogenase compare
A4249_RS01735 -2.6 -13.1 acyltransferase family protein compare
A4249_RS06155 -2.5 -2.4 anthranilate synthase component I compare
A4249_RS09930 -2.5 -13.8 efflux RND transporter periplasmic adaptor subunit compare
A4249_RS04490 -2.5 -3.2 cobaltochelatase subunit CobS compare
A4249_RS08455 -2.5 -20.1 TolC family outer membrane protein compare
A4249_RS14065 -2.5 -3.7 MFS transporter compare
A4249_RS07830 -2.5 -7.3 FAD-binding oxidoreductase compare
A4249_RS12150 -2.4 -10.0 PTS sugar transporter subunit IIA compare
A4249_RS05900 -2.4 -3.3 hypothetical protein compare
A4249_RS14550 -2.4 -2.3 AMP nucleosidase compare
A4249_RS06525 -2.4 -3.2 SCP2 sterol-binding domain-containing protein compare
A4249_RS15715 -2.3 -17.4 phosphomethylpyrimidine synthase ThiC compare
A4249_RS04075 -2.3 -14.2 thioredoxin domain-containing protein compare
A4249_RS12210 -2.3 -3.3 tyrosine recombinase XerC compare
A4249_RS08590 -2.3 -9.9 MlaD family protein compare
A4249_RS02505 -2.3 -12.9 glycine C-acetyltransferase compare
A4249_RS09925 -2.3 -16.1 multidrug efflux RND transporter permease subunit compare
A4249_RS06165 -2.3 -2.2 aminodeoxychorismate/anthranilate synthase component II compare
A4249_RS09920 -2.3 -14.7 TolC family protein compare
A4249_RS04480 -2.2 -2.0 HIT family protein compare
A4249_RS07955 -2.2 -15.8 MBL fold metallo-hydrolase compare
A4249_RS12970 -2.2 -6.7 glycosyltransferase family 61 protein compare
A4249_RS02600 -2.2 -6.8 hypothetical protein compare
A4249_RS12640 -2.2 -2.2 hypothetical protein compare
A4249_RS04685 -2.2 -9.8 VTT domain-containing protein compare
A4249_RS06440 -2.1 -8.3 glycosyltransferase compare
A4249_RS08285 -2.1 -3.0 preQ(1) synthase compare
A4249_RS07920 -2.1 -7.6 metalloregulator ArsR/SmtB family transcription factor compare
A4249_RS04085 -2.1 -3.5 ribonuclease E/G compare
A4249_RS15865 -2.0 -1.3 Holliday junction branch migration DNA helicase RuvB compare
A4249_RS12330 -2.0 -3.5 hypothetical protein compare
A4249_RS10800 -2.0 -10.3 bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase compare
A4249_RS05715 -2.0 -1.9 hypothetical protein compare
A4249_RS00380 -1.9 -5.5 MerR family DNA-binding transcriptional regulator compare
A4249_RS00100 -1.9 -2.6 PadR family transcriptional regulator compare
A4249_RS10815 -1.8 -5.1 Do family serine endopeptidase compare
A4249_RS04125 -1.8 -3.2 mechanosensitive ion channel family protein compare
A4249_RS13200 -1.8 -2.8 thiamine pyrophosphate-dependent enzyme compare
A4249_RS08530 -1.8 -3.7 RNA polymerase-binding protein DksA compare
A4249_RS06665 -1.8 -2.8 endonuclease/exonuclease/phosphatase family protein compare
A4249_RS04475 -1.8 -3.2 response regulator transcription factor compare
A4249_RS00290 -1.8 -1.7 histidine phosphatase family protein compare
A4249_RS00305 -1.7 -4.4 DUF4908 domain-containing protein compare
A4249_RS05470 -1.7 -14.9 lytic transglycosylase domain-containing protein compare
A4249_RS00115 -1.7 -5.9 heme o synthase compare
A4249_RS00270 -1.7 -1.9 very short patch repair endonuclease compare
A4249_RS13400 -1.7 -2.7 DUF2939 domain-containing protein compare
A4249_RS09215 -1.6 -15.9 tyrosine-protein phosphatase compare
A4249_RS13195 -1.6 -4.7 alpha-ketoacid dehydrogenase subunit beta compare
A4249_RS14485 -1.5 -5.2 phosphoenolpyruvate--protein phosphotransferase compare
A4249_RS06680 -1.5 -2.5 tipN compare
A4249_RS10295 -1.5 -2.0 hypothetical protein compare
A4249_RS14740 -1.5 -3.6 NifU family protein compare
A4249_RS11570 -1.5 -4.4 YeeE/YedE thiosulfate transporter family protein compare
A4249_RS10095 -1.5 -1.6 NlpC/P60 family protein compare
A4249_RS01010 -1.5 -7.5 capsular polysaccharide biosynthesis protein compare
A4249_RS08390 -1.4 -11.1 ATP-dependent Clp protease ATP-binding subunit ClpA compare
A4249_RS02325 -1.4 -1.3 23S ribosomal RNA compare
A4249_RS14900 -1.4 -7.0 phosphate/phosphite/phosphonate ABC transporter substrate-binding protein compare
A4249_RS11575 -1.4 -2.4 YeeE/YedE family protein compare
A4249_RS09535 -1.4 -3.5 FecR domain-containing protein compare
A4249_RS11460 -1.4 -5.5 DUF2125 domain-containing protein compare
A4249_RS14025 -1.4 -1.4 CHAP domain-containing protein compare
A4249_RS00895 -1.4 -2.1 DUF1476 domain-containing protein compare
A4249_RS08370 -1.4 -4.5 polysaccharide deacetylase family protein compare
A4249_RS03845 -1.3 -3.1 TerC family protein compare
A4249_RS17075 -1.3 -3.0 energy transducer TonB compare
A4249_RS04655 -1.3 -6.8 peptidoglycan DD-metalloendopeptidase family protein compare
A4249_RS16565 -1.3 -3.2 hypothetical protein compare
A4249_RS01085 -1.3 -2.2 DUF2282 domain-containing protein compare
A4249_RS00800 -1.3 -4.1 5-formyltetrahydrofolate cyclo-ligase compare
A4249_RS12085 -1.3 -3.7 DUF883 family protein compare
A4249_RS12140 -1.3 -5.6 ATP-binding protein compare
A4249_RS15275 -1.3 -5.2 peptide chain release factor 3 compare
A4249_RS13760 -1.3 -1.2 YggS family pyridoxal phosphate-dependent enzyme compare
A4249_RS09265 -1.3 -2.3 exodeoxyribonuclease VII large subunit compare
A4249_RS08510 -1.3 -2.8 hypothetical protein compare
A4249_RS00170 -1.2 -2.0 TetR/AcrR family transcriptional regulator compare
A4249_RS08375 -1.2 -2.6 hypothetical protein compare
A4249_RS04765 -1.2 -3.9 ATP-dependent DNA helicase RecG compare
A4249_RS08775 -1.2 -2.5 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA compare
A4249_RS11285 -1.2 -2.9 double-strand break repair protein AddB compare
A4249_RS08585 -1.2 -3.0 ABC-type transport auxiliary lipoprotein family protein compare
A4249_RS07290 -1.2 -2.8 ribonuclease E/G compare
A4249_RS06370 -1.2 -1.8 hypothetical protein compare
A4249_RS01905 -1.2 -0.6 TrbC/VirB2 family protein compare
A4249_RS09405 -1.2 -2.0 beta-N-acetylhexosaminidase compare
A4249_RS01605 -1.2 -8.4 MFS transporter compare
A4249_RS01650 -1.2 -1.0 DUF1289 domain-containing protein compare
A4249_RS13480 -1.2 -5.2 protein-export chaperone SecB compare
A4249_RS14520 -1.2 -8.3 alpha/beta hydrolase compare
A4249_RS13490 -1.2 -7.6 MltA domain-containing protein compare


Specific Phenotypes

For 13 genes in this experiment

For carbon source Tween 20 in Brevundimonas sp. GW460-12-10-14-LB2

For carbon source Tween 20 across organisms