Experiment set1S91 for Brevundimonas sp. GW460-12-10-14-LB2

Compare to:

Tween 20 carbon source, 30C

200 most detrimental genes:

  gene name fitness t score description  
A4249_RS17005 +1.6 9.4 glucokinase compare
A4249_RS00145 +1.4 2.4 SURF1 family protein compare
A4249_RS03370 +1.3 1.4 copper-binding protein compare
A4249_RS17010 +1.3 10.5 glucokinase compare
A4249_RS14135 +1.2 2.5 ATP-binding protein compare
A4249_RS08705 +1.2 5.1 response regulator compare
A4249_RS15030 +1.2 10.7 aromatic ring-hydroxylating dioxygenase subunit alpha compare
A4249_RS10785 +1.1 2.3 hypothetical protein compare
A4249_RS11825 +1.1 1.5 DUF6521 family protein compare
A4249_RS14845 +1.1 8.3 saccharopine dehydrogenase family protein compare
A4249_RS07665 +1.1 3.2 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD compare
A4249_RS10735 +1.1 3.2 phosphogluconate dehydratase compare
A4249_RS09620 +1.1 3.0 flagellar basal-body rod protein FlgF compare
A4249_RS09940 +1.0 7.2 sugar MFS transporter compare
A4249_RS04620 +0.9 1.8 hypothetical protein compare
A4249_RS01230 +0.9 1.7 hypothetical protein compare
A4249_RS08805 +0.9 6.0 HAMP domain-containing sensor histidine kinase compare
A4249_RS16040 +0.9 5.8 FAD-dependent oxidoreductase compare
A4249_RS08440 +0.9 1.4 TlyA family RNA methyltransferase compare
A4249_RS14105 +0.8 2.3 hypothetical protein compare
A4249_RS12225 +0.8 1.7 SDR family oxidoreductase compare
A4249_RS08355 +0.8 4.1 response regulator compare
A4249_RS01815 +0.8 3.1 DNA mismatch endonuclease Vsr compare
A4249_RS04465 +0.8 3.1 SURF1 family protein compare
A4249_RS11720 +0.8 1.2 strawberry notch C-terminal domain-containing protein compare
A4249_RS10480 +0.8 1.1 DUF1190 domain-containing protein compare
A4249_RS02880 +0.8 3.8 hypothetical protein compare
A4249_RS14680 +0.8 1.6 PAS domain-containing sensor histidine kinase compare
A4249_RS07120 +0.8 2.0 hypothetical protein compare
A4249_RS05790 +0.8 3.3 transmembrane anchor protein compare
A4249_RS08730 +0.7 5.3 hypothetical protein compare
A4249_RS03230 +0.7 1.8 copper homeostasis periplasmic binding protein CopC compare
A4249_RS10060 +0.7 4.8 RluA family pseudouridine synthase compare
A4249_RS12855 +0.7 4.2 serine protease compare
A4249_RS15885 +0.7 5.6 tol-pal system-associated acyl-CoA thioesterase compare
A4249_RS00215 +0.7 2.8 bifunctional diguanylate cyclase/phosphodiesterase compare
A4249_RS03690 +0.7 1.0 hypothetical protein compare
A4249_RS16010 +0.7 1.3 flagellar type III secretion system pore protein FliP compare
A4249_RS07380 +0.7 1.9 exopolysaccharide biosynthesis protein compare
A4249_RS05055 +0.7 3.2 hypothetical protein compare
A4249_RS01615 +0.7 1.5 GNAT family N-acetyltransferase compare
A4249_RS09025 +0.7 5.7 PepSY domain-containing protein compare
A4249_RS07320 +0.6 1.6 hypothetical protein compare
A4249_RS05155 +0.6 2.3 CHASE3 domain-containing protein compare
A4249_RS04445 +0.6 3.8 ubiquinol oxidase subunit II compare
A4249_RS11275 +0.6 3.1 phosphotransferase compare
A4249_RS00765 +0.6 4.2 formate-dependent phosphoribosylglycinamide formyltransferase compare
A4249_RS11525 +0.6 2.4 DsrE family protein compare
A4249_RS01075 +0.6 2.1 DNA-binding domain-containing protein compare
A4249_RS09955 +0.6 5.3 alpha-amylase family glycosyl hydrolase compare
A4249_RS09575 +0.6 2.7 hypothetical protein compare
A4249_RS09725 +0.6 1.2 hypothetical protein compare
A4249_RS04795 +0.6 2.3 CinA family protein compare
A4249_RS02650 +0.6 1.5 hypothetical protein compare
A4249_RS06870 +0.6 3.4 hypothetical protein compare
A4249_RS15265 +0.6 3.1 hypothetical protein compare
A4249_RS09605 +0.5 0.9 DUF6468 domain-containing protein compare
A4249_RS07895 +0.5 1.0 VOC family protein compare
A4249_RS00050 +0.5 0.5 type 1 glutamine amidotransferase compare
A4249_RS14830 +0.5 1.0 peptidoglycan DD-metalloendopeptidase family protein compare
A4249_RS15180 +0.5 2.6 hypothetical protein compare
A4249_RS13495 +0.5 1.3 organic hydroperoxide resistance protein compare
A4249_RS01965 +0.5 1.2 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
A4249_RS04440 +0.5 3.3 MFS transporter compare
A4249_RS08720 +0.5 2.5 PaaI family thioesterase compare
A4249_RS14920 +0.5 2.8 GNAT family N-acetyltransferase compare
A4249_RS10320 +0.5 1.5 HAMP domain-containing sensor histidine kinase compare
A4249_RS15065 +0.5 4.4 SCO family protein compare
A4249_RS14405 +0.5 3.4 TetR/AcrR family transcriptional regulator compare
A4249_RS09740 +0.5 5.0 histidine kinase dimerization/phosphoacceptor domain -containing protein compare
A4249_RS03150 +0.5 2.9 cation transporter compare
A4249_RS16585 +0.5 1.2 hypothetical protein compare
A4249_RS01310 +0.5 1.8 hypothetical protein compare
A4249_RS06435 +0.5 1.1 tRNA-Asp compare
A4249_RS12860 +0.5 1.5 DUF350 domain-containing protein compare
A4249_RS11185 +0.5 1.9 exopolysaccharide biosynthesis protein compare
A4249_RS04470 +0.5 3.6 ATP-binding protein compare
A4249_RS14825 +0.5 1.6 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
A4249_RS01000 +0.5 2.7 DoxX family protein compare
A4249_RS09515 +0.5 1.5 hypothetical protein compare
A4249_RS11730 +0.5 2.9 DUF305 domain-containing protein compare
A4249_RS03140 +0.5 2.2 efflux RND transporter periplasmic adaptor subunit compare
A4249_RS08520 +0.5 1.5 hypothetical protein compare
A4249_RS14715 +0.5 2.5 PhoH family protein compare
A4249_RS00855 +0.5 2.0 hypothetical protein compare
A4249_RS11930 +0.5 1.5 YcxB family protein compare
A4249_RS08315 +0.5 3.9 cystathionine gamma-synthase compare
A4249_RS11150 +0.5 2.1 capsular biosynthesis protein compare
A4249_RS09735 +0.5 1.8 NUDIX domain-containing protein compare
A4249_RS03340 +0.5 3.2 PepSY domain-containing protein compare
A4249_RS02865 +0.5 1.1 arsenate reductase family protein compare
A4249_RS00060 +0.5 1.4 fatty acid desaturase compare
A4249_RS09965 +0.5 4.2 glycoside hydrolase family 97 protein compare
A4249_RS09565 +0.5 1.7 hypothetical protein compare
A4249_RS05315 +0.5 3.4 glycosyltransferase compare
A4249_RS09970 +0.5 4.0 MFS transporter compare
A4249_RS07775 +0.5 3.9 cytochrome c family protein compare
A4249_RS15050 +0.5 1.3 lysozyme inhibitor LprI family protein compare
A4249_RS00755 +0.5 1.3 YbdD/YjiX family protein compare
A4249_RS15675 +0.5 3.4 Crp/Fnr family transcriptional regulator compare
A4249_RS04220 +0.5 0.9 low molecular weight phosphotyrosine protein phosphatase compare
A4249_RS06465 +0.5 1.1 hypothetical protein compare
A4249_RS12890 +0.5 3.1 RNA 2',3'-cyclic phosphodiesterase compare
A4249_RS02120 +0.4 1.8 MarR family transcriptional regulator compare
A4249_RS14360 +0.4 1.1 pilus assembly protein compare
A4249_RS05885 +0.4 1.4 cold-shock protein compare
A4249_RS14480 +0.4 2.1 helix-turn-helix domain-containing protein compare
A4249_RS03295 +0.4 2.5 HAD family hydrolase compare
A4249_RS03810 +0.4 3.2 biotin carboxylase N-terminal domain-containing protein compare
A4249_RS03670 +0.4 0.5 endonuclease/exonuclease/phosphatase family protein compare
A4249_RS14080 +0.4 2.4 TnsA endonuclease N-terminal domain-containing protein compare
A4249_RS16655 +0.4 1.7 hypothetical protein compare
A4249_RS04690 +0.4 2.8 hemerythrin domain-containing protein compare
A4249_RS09745 +0.4 2.6 response regulator compare
A4249_RS10460 +0.4 3.7 ATP-binding protein compare
A4249_RS07080 +0.4 1.5 hypothetical protein compare
A4249_RS01110 +0.4 2.1 DUF305 domain-containing protein compare
A4249_RS09500 +0.4 1.9 3-oxoacyl-ACP reductase compare
A4249_RS08330 +0.4 2.0 NUDIX domain-containing protein compare
A4249_RS07445 +0.4 1.2 hypothetical protein compare
A4249_RS15580 +0.4 2.8 chemotaxis response regulator protein-glutamate methylesterase compare
A4249_RS10345 +0.4 2.4 hypothetical protein compare
A4249_RS13125 +0.4 1.2 ribonuclease PH compare
A4249_RS13270 +0.4 3.0 DUF1223 domain-containing protein compare
A4249_RS04810 +0.4 2.6 tRNA dihydrouridine synthase DusB compare
A4249_RS07050 +0.4 0.7 hypothetical protein compare
A4249_RS13615 +0.4 1.7 Rrf2 family transcriptional regulator compare
A4249_RS08535 +0.4 0.6 flagellar assembly protein FliX compare
A4249_RS07170 +0.4 1.7 hypothetical protein compare
A4249_RS07260 +0.4 2.5 aldo/keto reductase compare
A4249_RS02825 +0.4 1.2 heat shock protein HspQ compare
A4249_RS10190 +0.4 1.9 terminase family protein compare
A4249_RS08320 +0.4 3.2 cystathionine beta-synthase compare
A4249_RS02395 +0.4 1.2 FecR domain-containing protein compare
A4249_RS08540 +0.4 2.6 flagellar basal body P-ring protein FlgI compare
A4249_RS15005 +0.4 2.3 MarR family transcriptional regulator compare
A4249_RS03795 +0.4 3.4 carboxyl transferase domain-containing protein compare
A4249_RS09945 +0.4 3.8 TonB-dependent receptor compare
A4249_RS01090 +0.4 0.5 sigma-70 family RNA polymerase sigma factor compare
A4249_RS05215 +0.4 1.7 hypothetical protein compare
A4249_RS04755 +0.4 1.8 TatD family hydrolase compare
A4249_RS07180 +0.4 2.0 hypothetical protein compare
A4249_RS04675 +0.4 1.4 hypothetical protein compare
A4249_RS09750 +0.4 3.4 CHASE3 domain-containing protein compare
A4249_RS16845 +0.4 1.2 hypothetical protein compare
A4249_RS10965 +0.4 0.6 response regulator compare
A4249_RS00260 +0.4 1.1 YqgE/AlgH family protein compare
A4249_RS01610 +0.4 0.5 TetR/AcrR family transcriptional regulator compare
A4249_RS03650 +0.4 2.3 hypothetical protein compare
A4249_RS07205 +0.4 2.3 hypothetical protein compare
A4249_RS16780 +0.4 1.4 HNH endonuclease compare
A4249_RS16890 +0.4 2.8 RcnB family protein compare
A4249_RS00425 +0.4 1.1 VOC family protein compare
A4249_RS14970 +0.4 1.6 phasin compare
A4249_RS06105 +0.4 1.8 cytochrome b compare
A4249_RS08250 +0.4 2.4 DUF3126 family protein compare
A4249_RS15800 +0.4 1.8 thioesterase family protein compare
A4249_RS08020 +0.4 1.6 EF-hand domain-containing protein compare
A4249_RS16590 +0.4 1.3 hypothetical protein compare
A4249_RS09595 +0.4 1.7 DUF3297 family protein compare
A4249_RS05915 +0.4 2.0 peptide-methionine (R)-S-oxide reductase MsrB compare
A4249_RS08670 +0.4 2.4 YafY family protein compare
A4249_RS07785 +0.4 2.2 efflux RND transporter periplasmic adaptor subunit compare
A4249_RS05390 +0.4 0.9 SOS response-associated peptidase family protein compare
A4249_RS06120 +0.4 2.0 GNAT family N-acetyltransferase compare
A4249_RS01030 +0.4 1.9 hypothetical protein compare
A4249_RS11390 +0.4 2.5 hypothetical protein compare
A4249_RS12220 +0.4 1.9 retroviral-like aspartic protease family protein compare
A4249_RS15055 +0.4 1.1 SprT family zinc-dependent metalloprotease compare
A4249_RS03635 +0.4 2.8 sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC compare
A4249_RS16595 +0.4 2.6 hypothetical protein compare
A4249_RS13335 +0.4 1.4 DUF2459 domain-containing protein compare
A4249_RS00810 +0.4 2.0 glycosyltransferase family 4 protein compare
A4249_RS01215 +0.4 0.6 hypothetical protein compare
A4249_RS13310 +0.4 1.2 transglutaminase family protein compare
A4249_RS04555 +0.4 1.9 transporter compare
A4249_RS05290 +0.4 1.9 Crp/Fnr family transcriptional regulator compare
A4249_RS08175 +0.4 3.0 hemolysin family protein compare
A4249_RS02700 +0.4 3.3 DUF4112 domain-containing protein compare
A4249_RS05960 +0.4 0.8 MerR family transcriptional regulator compare
A4249_RS14840 +0.4 1.7 carboxynorspermidine decarboxylase compare
A4249_RS06985 +0.4 0.5 hypothetical protein compare
A4249_RS12175 +0.3 2.1 zf-TFIIB domain-containing protein compare
A4249_RS03210 +0.3 2.3 copper resistance protein B compare
A4249_RS03000 +0.3 1.7 glycosyltransferase family 1 protein compare
A4249_RS14530 +0.3 1.8 OmpA family protein compare
A4249_RS01285 +0.3 1.1 head decoration protein compare
A4249_RS13380 +0.3 1.7 DUF2945 domain-containing protein compare
A4249_RS11540 +0.3 1.5 substrate-binding domain-containing protein compare
A4249_RS00505 +0.3 0.8 GNAT family N-acetyltransferase compare
A4249_RS11850 +0.3 2.0 hypothetical protein compare
A4249_RS02710 +0.3 1.4 hypothetical protein compare
A4249_RS15270 +0.3 1.9 hypothetical protein compare
A4249_RS09105 +0.3 2.5 M3 family oligoendopeptidase compare
A4249_RS00080 +0.3 1.4 DUF3298 and DUF4163 domain-containing protein compare
A4249_RS14415 +0.3 1.8 MFS transporter compare
A4249_RS00830 +0.3 0.9 hypothetical protein compare
A4249_RS16090 +0.3 2.1 DUF1150 domain-containing protein compare
A4249_RS04495 +0.3 1.0 organic hydroperoxide resistance protein compare
A4249_RS07910 +0.3 0.9 2-hydroxyacid dehydrogenase compare


Specific Phenotypes

For 13 genes in this experiment

For carbon source Tween 20 in Brevundimonas sp. GW460-12-10-14-LB2

For carbon source Tween 20 across organisms