Experiment set1S90 for Brevundimonas sp. GW460-12-10-14-LB2

Compare to:

D-Glucose carbon source; 30C

200 most important genes:

  gene name fitness t score description  
A4249_RS13805 -5.8 -9.8 HAD family hydrolase compare
A4249_RS05920 -5.7 -23.5 N-acetyl-gamma-glutamyl-phosphate reductase compare
A4249_RS07925 -5.7 -5.5 methylenetetrahydrofolate reductase [NAD(P)H] compare
A4249_RS09255 -5.4 -4.0 phosphoribosylamine--glycine ligase compare
A4249_RS12965 -5.4 -18.1 acetylglutamate kinase compare
A4249_RS10010 -5.3 -8.1 2-isopropylmalate synthase compare
A4249_RS14275 -5.2 -22.4 argininosuccinate synthase compare
A4249_RS09670 -5.1 -13.5 DUF2849 domain-containing protein compare
A4249_RS10030 -5.0 -16.0 dihydroxy-acid dehydratase compare
A4249_RS10025 -5.0 -4.9 ketol-acid reductoisomerase compare
A4249_RS14465 -5.0 -11.5 sulfite exporter TauE/SafE family protein compare
A4249_RS14740 -4.9 -5.8 NifU family protein compare
A4249_RS12555 -4.9 -12.3 argininosuccinate lyase compare
A4249_RS10020 -4.9 -12.6 acetolactate synthase 2 catalytic subunit compare
A4249_RS11400 -4.9 -4.7 GNAT family N-acetyltransferase compare
A4249_RS09655 -4.9 -16.4 cysteine synthase A compare
A4249_RS10695 -4.9 -9.3 histidinol dehydrogenase compare
A4249_RS10005 -4.8 -18.7 3-isopropylmalate dehydratase large subunit compare
A4249_RS15305 -4.7 -15.1 sulfate adenylyltransferase subunit CysD compare
A4249_RS10715 -4.7 -11.7 imidazole glycerol phosphate synthase subunit HisF compare
A4249_RS12150 -4.7 -9.9 PTS sugar transporter subunit IIA compare
A4249_RS11920 -4.7 -13.1 ornithine carbamoyltransferase compare
A4249_RS02505 -4.7 -12.4 glycine C-acetyltransferase compare
A4249_RS05460 -4.7 -4.5 iron ABC transporter permease compare
A4249_RS07935 -4.6 -20.7 methionine synthase compare
A4249_RS09675 -4.6 -14.5 siroheme synthase CysG compare
A4249_RS16995 -4.6 -13.3 phosphoglycerate dehydrogenase compare
A4249_RS15300 -4.6 -15.2 sulfate adenylyltransferase subunit CysN compare
A4249_RS11570 -4.6 -4.4 YeeE/YedE thiosulfate transporter family protein compare
A4249_RS08380 -4.6 -8.7 RidA family protein compare
A4249_RS12105 -4.6 -14.6 TonB-dependent receptor compare
A4249_RS00020 -4.5 -12.4 threonine synthase compare
A4249_RS02425 -4.5 -16.3 LL-diaminopimelate aminotransferase compare
A4249_RS10720 -4.5 -11.9 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE compare
A4249_RS10735 -4.5 -6.7 phosphogluconate dehydratase compare
A4249_RS07930 -4.5 -7.4 homocysteine S-methyltransferase family protein compare
A4249_RS10700 -4.4 -8.5 imidazoleglycerol-phosphate dehydratase HisB compare
A4249_RS09680 -4.4 -9.4 transcriptional regulator GcvA compare
A4249_RS09995 -4.4 -14.2 3-isopropylmalate dehydrogenase compare
A4249_RS09660 -4.4 -6.6 phosphoadenylyl-sulfate reductase compare
A4249_RS12510 -4.3 -10.1 phosphoenolpyruvate carboxylase compare
A4249_RS15715 -4.3 -25.5 phosphomethylpyrimidine synthase ThiC compare
A4249_RS17010 -4.3 -20.7 glucokinase compare
A4249_RS11575 -4.3 -4.1 YeeE/YedE family protein compare
A4249_RS10255 -4.3 -13.0 cysteine synthase A compare
A4249_RS00010 -4.2 -5.0 homoserine kinase compare
A4249_RS13535 -4.2 -15.4 bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ compare
A4249_RS09665 -4.2 -16.9 nitrite/sulfite reductase compare
A4249_RS12545 -4.2 -14.3 diaminopimelate decarboxylase compare
A4249_RS16120 -4.2 -11.3 glutamate-5-semialdehyde dehydrogenase compare
A4249_RS06830 -4.2 -4.0 chorismate mutase compare
A4249_RS16125 -4.1 -11.2 glutamate 5-kinase compare
A4249_RS08530 -4.1 -4.8 RNA polymerase-binding protein DksA compare
A4249_RS16165 -4.1 -2.8 homoserine O-succinyltransferase compare
A4249_RS10690 -4.1 -10.7 ATP phosphoribosyltransferase compare
A4249_RS00615 -4.0 -10.4 threonine ammonia-lyase, biosynthetic compare
A4249_RS05465 -4.0 -4.7 ABC transporter ATP-binding protein compare
A4249_RS16160 -3.9 -13.6 cystathionine gamma-synthase compare
A4249_RS16105 -3.9 -14.8 glutamate synthase large subunit compare
A4249_RS07830 -3.8 -2.7 FAD-binding oxidoreductase compare
A4249_RS06635 -3.8 -7.6 manganese efflux pump MntP family protein compare
A4249_RS09940 -3.8 -12.7 sugar MFS transporter compare
A4249_RS10705 -3.8 -8.6 imidazole glycerol phosphate synthase subunit HisH compare
A4249_RS09840 -3.7 -6.6 pyrroline-5-carboxylate reductase dimerization domain-containing protein compare
A4249_RS10000 -3.7 -7.1 3-isopropylmalate dehydratase small subunit compare
A4249_RS14610 -3.7 -18.0 glycosyltransferase family 39 protein compare
A4249_RS06835 -3.7 -3.5 prephenate dehydratase domain-containing protein compare
A4249_RS10035 -3.6 -8.3 hypothetical protein compare
A4249_RS17005 -3.6 -5.1 glucokinase compare
A4249_RS16110 -3.5 -8.1 NAD(P)-dependent oxidoreductase compare
A4249_RS13190 -3.5 -4.1 2-oxo acid dehydrogenase subunit E2 compare
A4249_RS11435 -3.5 -29.0 YdcF family protein compare
A4249_RS02510 -3.5 -5.7 L-threonine 3-dehydrogenase compare
A4249_RS07995 -3.4 -2.3 type II 3-dehydroquinate dehydratase compare
A4249_RS09315 -3.4 -4.1 class 1 fructose-bisphosphatase compare
A4249_RS07920 -3.4 -5.7 metalloregulator ArsR/SmtB family transcription factor compare
A4249_RS12260 -3.4 -4.6 3-hydroxybutyryl-CoA dehydrogenase compare
A4249_RS00290 -3.4 -1.5 histidine phosphatase family protein compare
A4249_RS12470 -3.4 -2.3 histidinol-phosphatase compare
A4249_RS05455 -3.4 -4.0 ABC transporter substrate-binding protein compare
A4249_RS01460 -3.4 -3.9 signal peptide peptidase SppA compare
A4249_RS08600 -3.3 -3.2 ABC transporter permease compare
A4249_RS11560 -3.3 -2.3 peroxiredoxin compare
A4249_RS14585 -3.3 -5.0 glucose-6-phosphate isomerase compare
A4249_RS12200 -3.2 -7.8 fructose-6-phosphate aldolase compare
A4249_RS02675 -3.2 -4.7 N-acetyltransferase compare
A4249_RS07610 -3.2 -3.7 methyltransferase type 11 compare
A4249_RS08220 -3.2 -3.0 phosphoribosylglycinamide formyltransferase compare
A4249_RS12295 -3.1 -3.6 trehalose-phosphatase compare
A4249_RS05620 -3.1 -17.5 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
A4249_RS08255 -3.0 -2.1 serine O-acetyltransferase compare
A4249_RS06580 -3.0 -5.5 HWE histidine kinase domain-containing protein compare
A4249_RS13855 -2.9 -8.6 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
A4249_RS11450 -2.9 -3.9 histidinol-phosphate transaminase compare
A4249_RS08855 -2.8 -5.4 L,D-transpeptidase family protein compare
A4249_RS10710 -2.7 -1.2 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
A4249_RS11125 -2.7 -18.7 glycosyltransferase family 9 protein compare
A4249_RS08510 -2.6 -1.8 hypothetical protein compare
A4249_RS07060 -2.5 -2.1 single-stranded DNA-binding protein compare
A4249_RS13590 -2.5 -9.1 [protein-PII] uridylyltransferase compare
A4249_RS02905 -2.4 -1.6 tRNA guanosine(34) transglycosylase Tgt compare
A4249_RS10800 -2.3 -10.4 bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase compare
A4249_RS08775 -2.3 -4.3 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA compare
A4249_RS09285 -2.3 -6.8 Tat pathway signal sequence domain protein compare
A4249_RS04080 -2.3 -3.7 M48 family metalloprotease compare
A4249_RS14305 -2.3 -13.3 gamma-glutamyltransferase family protein compare
A4249_RS04100 -2.2 -8.6 J domain-containing protein compare
A4249_RS02820 -2.2 -3.8 Ppx/GppA phosphatase family protein compare
A4249_RS01740 -2.2 -12.8 VOC family protein compare
A4249_RS15505 -2.2 -9.2 DUF3617 family protein compare
A4249_RS05625 -2.2 -16.0 ADP-glyceromanno-heptose 6-epimerase compare
A4249_RS08390 -2.2 -14.6 ATP-dependent Clp protease ATP-binding subunit ClpA compare
A4249_RS02220 -2.2 -7.3 MaoC family dehydratase compare
A4249_RS13745 -2.1 -9.4 DUF3576 domain-containing protein compare
A4249_RS14025 -2.1 -2.0 CHAP domain-containing protein compare
A4249_RS14485 -2.1 -6.9 phosphoenolpyruvate--protein phosphotransferase compare
A4249_RS09275 -2.1 -6.0 DUF3035 domain-containing protein compare
A4249_RS09215 -2.1 -19.9 tyrosine-protein phosphatase compare
A4249_RS13195 -2.0 -4.4 alpha-ketoacid dehydrogenase subunit beta compare
A4249_RS07620 -2.0 -10.0 NAD regulator compare
A4249_RS05505 -2.0 -4.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
A4249_RS08395 -2.0 -4.0 ATP-dependent Clp protease adapter ClpS compare
A4249_RS08595 -1.9 -5.2 ABC transporter ATP-binding protein compare
A4249_RS12970 -1.9 -5.3 glycosyltransferase family 61 protein compare
A4249_RS14390 -1.8 -7.2 DNA cytosine methyltransferase compare
A4249_RS11565 -1.8 -7.5 MBL fold metallo-hydrolase compare
A4249_RS13200 -1.8 -2.6 thiamine pyrophosphate-dependent enzyme compare
A4249_RS09695 -1.8 -10.7 polyprenyl synthetase family protein compare
A4249_RS04490 -1.8 -2.5 cobaltochelatase subunit CobS compare
A4249_RS01650 -1.8 -1.8 DUF1289 domain-containing protein compare
A4249_RS04765 -1.7 -5.0 ATP-dependent DNA helicase RecG compare
A4249_RS08590 -1.7 -8.2 MlaD family protein compare
A4249_RS14980 -1.7 -4.7 TetR/AcrR family transcriptional regulator compare
A4249_RS06165 -1.7 -1.1 aminodeoxychorismate/anthranilate synthase component II compare
A4249_RS06155 -1.7 -2.7 anthranilate synthase component I compare
A4249_RS14820 -1.7 -5.1 ribosome silencing factor compare
A4249_RS14550 -1.7 -3.1 AMP nucleosidase compare
A4249_RS02875 -1.6 -8.8 autotransporter assembly complex family protein compare
A4249_RS08640 -1.6 -5.1 DUF1153 domain-containing protein compare
A4249_RS06665 -1.6 -2.6 endonuclease/exonuclease/phosphatase family protein compare
A4249_RS09035 -1.6 -1.7 redox-regulated ATPase YchF compare
A4249_RS14065 -1.6 -2.6 MFS transporter compare
A4249_RS01735 -1.6 -9.1 acyltransferase family protein compare
A4249_RS05715 -1.6 -2.0 hypothetical protein compare
A4249_RS10805 -1.6 -9.0 ATP-binding protein compare
A4249_RS12275 -1.6 -4.9 cobaltochelatase subunit CobT compare
A4249_RS09950 -1.6 -12.3 alpha-amylase family glycosyl hydrolase compare
A4249_RS16280 -1.5 -4.6 general stress protein compare
A4249_RS02645 -1.5 -2.0 cobalamin biosynthesis protein CbiG compare
A4249_RS11225 -1.5 -2.7 fumarylacetoacetate hydrolase family protein compare
A4249_RS11275 -1.5 -5.7 phosphotransferase compare
A4249_RS08405 -1.5 -3.0 TIGR01841 family phasin compare
A4249_RS13800 -1.5 -14.2 AGE family epimerase/isomerase compare
A4249_RS14795 -1.5 -7.5 acyl dehydratase compare
A4249_RS14510 -1.5 -1.9 hypothetical protein compare
A4249_RS01465 -1.4 -3.1 hypothetical protein compare
A4249_RS09265 -1.4 -2.2 exodeoxyribonuclease VII large subunit compare
A4249_RS01905 -1.4 -1.0 TrbC/VirB2 family protein compare
A4249_RS04215 -1.4 -2.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD compare
A4249_RS12480 -1.4 -10.1 alpha/beta hydrolase compare
A4249_RS12640 -1.4 -1.8 hypothetical protein compare
A4249_RS03680 -1.4 -2.8 DUF6249 domain-containing protein compare
A4249_RS02830 -1.3 -8.9 phenylalanine 4-monooxygenase compare
A4249_RS06230 -1.3 -2.4 OmpH family outer membrane protein compare
A4249_RS17075 -1.3 -2.3 energy transducer TonB compare
A4249_RS07940 -1.3 -4.1 hypothetical protein compare
A4249_RS01010 -1.3 -6.0 capsular polysaccharide biosynthesis protein compare
A4249_RS00235 -1.3 -4.7 metalloregulator ArsR/SmtB family transcription factor compare
A4249_RS14895 -1.3 -3.7 phosphonate ABC transporter, permease protein PhnE compare
A4249_RS14605 -1.3 -3.3 glycosyltransferase family 2 protein compare
A4249_RS10815 -1.3 -3.8 Do family serine endopeptidase compare
A4249_RS00305 -1.2 -3.8 DUF4908 domain-containing protein compare
A4249_RS08375 -1.2 -2.3 hypothetical protein compare
A4249_RS12210 -1.2 -2.1 tyrosine recombinase XerC compare
A4249_RS17065 -1.2 -3.3 methyltransferase domain-containing protein compare
A4249_RS01315 -1.2 -3.8 hypothetical protein compare
A4249_RS03645 -1.2 -6.1 TonB-dependent receptor compare
A4249_RS02765 -1.2 -2.2 hypothetical protein compare
A4249_RS11290 -1.1 -2.3 double-strand break repair helicase AddA compare
A4249_RS08325 -1.1 -6.2 ribonuclease R compare
A4249_RS12205 -1.1 -0.9 DUF484 family protein compare
A4249_RS00240 -1.1 -3.3 rhodanese family protein compare
A4249_RS00735 -1.1 -9.9 TonB-dependent receptor compare
A4249_RS04685 -1.1 -6.5 VTT domain-containing protein compare
A4249_RS02870 -1.1 -4.4 translocation/assembly module TamB domain-containing protein compare
A4249_RS16485 -1.1 -1.6 hypothetical protein compare
A4249_RS10095 -1.1 -1.2 NlpC/P60 family protein compare
A4249_RS08905 -1.1 -1.8 M23 family metallopeptidase compare
A4249_RS14205 -1.1 -1.1 response regulator compare
A4249_RS07755 -1.1 -7.0 TetR/AcrR family transcriptional regulator compare
A4249_RS04125 -1.1 -1.4 mechanosensitive ion channel family protein compare
A4249_RS12085 -1.1 -3.5 DUF883 family protein compare
A4249_RS13705 -1.0 -5.3 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
A4249_RS00170 -1.0 -1.4 TetR/AcrR family transcriptional regulator compare
A4249_RS03845 -1.0 -2.0 TerC family protein compare
A4249_RS13060 -1.0 -5.8 AGE family epimerase/isomerase compare
A4249_RS11285 -1.0 -2.4 double-strand break repair protein AddB compare
A4249_RS09955 -1.0 -8.5 alpha-amylase family glycosyl hydrolase compare
A4249_RS08585 -1.0 -2.6 ABC-type transport auxiliary lipoprotein family protein compare
A4249_RS00265 -1.0 -1.9 peroxiredoxin compare


Specific Phenotypes

For 39 genes in this experiment

For carbon source D-Glucose in Brevundimonas sp. GW460-12-10-14-LB2

For carbon source D-Glucose across organisms