Experiment set1S90 for Brevundimonas sp. GW460-12-10-14-LB2
D-Glucose carbon source; 30C
Group: carbon sourceMedia: RCH2_defined_noCarbon + D-Glucose (20 mM)
Culturing: Brev2_ML6a, tube, Aerobic, at 30 (C), shaken=200 rpm
By: Hira on 1-Mar-23
Media components: 0.25 g/L Ammonium chloride, 0.1 g/L Potassium Chloride, 0.6 g/L Sodium phosphate monobasic monohydrate, 30 mM PIPES sesquisodium salt, Wolfe's mineral mix (0.03 g/L Magnesium Sulfate Heptahydrate, 0.015 g/L Nitrilotriacetic acid, 0.01 g/L Sodium Chloride, 0.005 g/L Manganese (II) sulfate monohydrate, 0.001 g/L Cobalt chloride hexahydrate, 0.001 g/L Zinc sulfate heptahydrate, 0.001 g/L Calcium chloride dihydrate, 0.001 g/L Iron (II) sulfate heptahydrate, 0.00025 g/L Nickel (II) chloride hexahydrate, 0.0002 g/L Aluminum potassium sulfate dodecahydrate, 0.0001 g/L Copper (II) sulfate pentahydrate, 0.0001 g/L Boric Acid, 0.0001 g/L Sodium Molybdate Dihydrate, 0.003 mg/L Sodium selenite pentahydrate), Wolfe's vitamin mix (0.1 mg/L Pyridoxine HCl, 0.05 mg/L 4-Aminobenzoic acid, 0.05 mg/L Lipoic acid, 0.05 mg/L Nicotinic Acid, 0.05 mg/L Riboflavin, 0.05 mg/L Thiamine HCl, 0.05 mg/L calcium pantothenate, 0.02 mg/L biotin, 0.02 mg/L Folic Acid, 0.001 mg/L Cyanocobalamin)
Specific Phenotypes
For 39 genes in this experiment
For carbon source D-Glucose in Brevundimonas sp. GW460-12-10-14-LB2
For carbon source D-Glucose across organisms
SEED Subsystems
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Selenoamino acid metabolism
- Terpenoid biosynthesis
- Biosynthesis of terpenoids and steroids
- Biosynthesis of alkaloids derived from terpenoid and polyketide
- Biosynthesis of plant hormones
- Glycine, serine and threonine metabolism
- Methionine metabolism
- Glutathione metabolism
- Galactose metabolism
- Cysteine metabolism
- Phenylalanine metabolism
- Phenylalanine, tyrosine and tryptophan biosynthesis
- Taurine and hypotaurine metabolism
- Cyanoamino acid metabolism
- Starch and sucrose metabolism
- Nucleotide sugars metabolism
- Glycerolipid metabolism
- Arachidonic acid metabolism
- Pyruvate metabolism
- Butanoate metabolism
- Nitrogen metabolism
MetaCyc Pathways
Pathways that contain genes with specific phenotypes: