Experiment set1S85 for Erwinia amylovora T8

Compare to:

FE-KB2-T1 (Control KB Rep 2 Time 1)

200 most important genes:

  gene name fitness t score description  
OLJFJH_02365 -5.3 -7.2 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase compare
OLJFJH_15205 -2.6 -8.0 muramoyltetrapeptide carboxypeptidase compare
OLJFJH_04080 -2.4 -4.5 adenine-specific DNA-methyltransferase compare
OLJFJH_16950 -2.0 -1.9 2-oxoglutarate dehydrogenase E1 component compare
OLJFJH_11230 -2.0 -2.6 4-phosphoerythronate dehydrogenase PdxB compare
OLJFJH_01045 -2.0 -9.4 1 6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
OLJFJH_06735 -1.9 -9.6 thiamine phosphate synthase compare
OLJFJH_16965 -1.8 -5.0 succinate dehydrogenase membrane anchor subunit compare
OLJFJH_05630 -1.6 -3.5 sce7726 family protein compare
OLJFJH_16180 -1.6 -7.1 cell division protein FtsK compare
OLJFJH_11360 -1.6 -5.1 phosphate acetyltransferase compare
OLJFJH_18020 -1.6 -4.3 cytochrome o ubiquinol oxidase subunit IV compare
OLJFJH_07015 -1.5 -1.0 stringent starvation protein A compare
OLJFJH_18025 -1.5 -4.7 heme o synthase compare
OLJFJH_07035 -1.5 -3.7 aerobic respiration two-component sensor histidine kinase ArcB compare
OLJFJH_11930 -1.5 -5.8 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
OLJFJH_18015 -1.5 -5.1 cytochrome o ubiquinol oxidase subunit III compare
OLJFJH_06330 -1.5 -9.7 ECA oligosaccharide polymerase compare
OLJFJH_16960 -1.5 -6.9 succinate dehydrogenase flavoprotein subunit compare
OLJFJH_00815 -1.5 -3.1 hypoxanthine phosphoribosyltransferase compare
OLJFJH_18010 -1.4 -6.2 cytochrome o ubiquinol oxidase subunit I compare
OLJFJH_15700 -1.4 -3.2 rhodanese-related sulfurtransferase compare
OLJFJH_06100 -1.4 -10.5 bifunctional aspartate kinase/homoserine dehydrogenase II compare
OLJFJH_09590 -1.3 -3.6 carbon storage regulator CsrA compare
OLJFJH_16955 -1.3 -3.2 succinate dehydrogenase iron-sulfur subunit compare
OLJFJH_13440 -1.2 -2.4 TonB system transport protein TonB compare
OLJFJH_06200 -1.2 -3.2 HTH-type transcriptional regulator HdfR compare
OLJFJH_17995 -1.2 -4.5 Uncharacterized lipoprotein compare
OLJFJH_11365 -1.2 -4.4 acetate kinase compare
OLJFJH_03640 -1.2 -8.8 lysine-sensitive aspartokinase 3 compare
OLJFJH_18000 -1.2 -8.3 muropeptide MFS transporter AmpG compare
OLJFJH_06280 -1.1 -9.0 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase compare
OLJFJH_09105 -1.1 -2.7 exodeoxyribonuclease V subunit alpha compare
OLJFJH_13115 -1.1 -2.7 septum site-determining protein MinD compare
OLJFJH_17810 -1.1 -4.0 YbaB/EbfC family nucleoid-associated protein compare
OLJFJH_05565 -1.1 -1.9 DNA-directed RNA polymerase subunit omega compare
OLJFJH_05635 -1.1 -3.2 beta family protein compare
OLJFJH_16780 -1.1 -3.2 6-phosphogluconolactonase compare
OLJFJH_13720 -1.1 -8.7 oligopeptide ABC transporter substrate-binding protein OppA compare
OLJFJH_11165 -1.0 -5.7 Sulfite exporter TauE/SafE compare
OLJFJH_17880 -1.0 -1.5 transcriptional regulator compare
OLJFJH_11595 -1.0 -4.8 FAD:protein FMN transferase ApbE compare
OLJFJH_05870 -1.0 -5.3 lipopolysaccharide biosynthesis protein compare
OLJFJH_01595 -1.0 -4.2 phosphoserine phosphatase compare
OLJFJH_01730 -1.0 -1.7 hypothetical protein compare
OLJFJH_06320 -1.0 -5.6 lipid III flippase WzxE compare
OLJFJH_04440 -1.0 -6.2 MurR/RpiR family transcriptional regulator compare
OLJFJH_16200 -1.0 -6.3 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC compare
OLJFJH_06040 -0.9 -6.3 glycerol kinase GlpK compare
OLJFJH_10685 -0.9 -2.1 Colicin immunity protein/pyocin immunity protein compare
OLJFJH_02080 -0.9 -3.4 DNA-binding transcriptional repressor compare
OLJFJH_13405 -0.9 -5.0 oligopeptide ABC transporter permease OppB compare
OLJFJH_10245 -0.9 -4.2 translation elongation factor 4 compare
OLJFJH_17040 -0.9 -2.5 replication initiation negative regulator SeqA compare
OLJFJH_16195 -0.9 -5.1 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
OLJFJH_10200 -0.9 -5.1 ATP-dependent RNA helicase SrmB compare
OLJFJH_15115 -0.9 -1.7 YgdI/YgdR family lipoprotein compare
OLJFJH_00695 -0.8 -2.6 Fe(3+)-hydroxamate ABC transporter substrate-binding protein FhuD compare
OLJFJH_11160 -0.8 -1.8 penicillin-insensitive murein endopeptidase compare
OLJFJH_12105 -0.8 -2.2 ABC transporter permease compare
OLJFJH_11455 -0.8 -1.6 NADH-quinone oxidoreductase subunit NuoK compare
OLJFJH_07825 -0.8 -4.1 tol-pal system-associated acyl-CoA thioesterase compare
OLJFJH_05850 -0.8 -6.4 deacetylase compare
OLJFJH_00595 -0.8 -4.9 sigma E protease regulator RseP compare
OLJFJH_12885 -0.8 -5.0 lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase compare
OLJFJH_00690 -0.8 -3.7 Fe(3+)-hydroxamate ABC transporter permease FhuB compare
OLJFJH_11050 -0.8 -2.7 tRNA-Arg compare
OLJFJH_17650 -0.8 -1.0 ABC transporter ATP-binding protein compare
OLJFJH_06335 -0.8 -6.5 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
OLJFJH_01370 -0.8 -2.2 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA compare
OLJFJH_13410 -0.8 -4.8 oligopeptide ABC transporter permease OppC compare
OLJFJH_13420 -0.8 -6.4 murein tripeptide/oligopeptide ABC transporter ATP binding protein OppF compare
OLJFJH_13415 -0.8 -5.7 ABC transporter ATP-binding protein compare
OLJFJH_13905 -0.8 -2.9 DUF2534 domain-containing protein compare
OLJFJH_10220 -0.8 -1.4 anti-sigma-E factor RseA compare
OLJFJH_12110 -0.8 -2.3 sugar ABC transporter ATP-binding protein compare
OLJFJH_06855 -0.8 -3.7 tRNA dihydrouridine synthase DusB compare
OLJFJH_06325 -0.8 -5.3 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase compare
OLJFJH_14045 -0.7 -2.2 transcriptional regulator compare
OLJFJH_09625 -0.7 -4.8 glutamate--cysteine ligase compare
OLJFJH_06270 -0.7 -3.1 thioredoxin TrxA compare
OLJFJH_11450 -0.7 -3.6 NADH-quinone oxidoreductase subunit J compare
OLJFJH_11430 -0.7 -5.2 NADH-quinone oxidoreductase subunit NuoF compare
OLJFJH_08835 -0.7 -2.5 site-specific tyrosine recombinase XerD compare
OLJFJH_06295 -0.7 -5.6 UDP-N-acetyl-D-mannosamine dehydrogenase compare
OLJFJH_09725 -0.7 -4.2 23S rRNA pseudouridine(1911/1915/1917) synthase RluD compare
OLJFJH_06740 -0.7 -4.4 phosphomethylpyrimidine synthase ThiC compare
OLJFJH_06545 -0.7 -2.7 NAD(P)H-flavin reductase compare
OLJFJH_11925 -0.7 -0.9 hydroxyethylthiazole kinase compare
OLJFJH_00700 -0.7 -1.9 Fe3+-hydroxamate ABC transporter ATP-binding protein FhuC compare
OLJFJH_02090 -0.7 -4.6 sorbitol-6-phosphate dehydrogenase compare
OLJFJH_11470 -0.7 -4.5 NADH-quinone oxidoreductase subunit NuoN compare
OLJFJH_06205 -0.7 -1.2 Protein of unknown function DUF compare
OLJFJH_09540 -0.7 -2.2 hypothetical protein compare
OLJFJH_06415 -0.7 -2.9 tyrosine recombinase XerC compare
OLJFJH_12515 -0.7 -1.7 DUF6388 domain-containing protein compare
OLJFJH_15555 -0.6 -1.5 23S rRNA accumulation protein YceD compare
OLJFJH_06640 -0.6 -2.4 elongation factor Tu compare
OLJFJH_08570 -0.6 -3.5 glutathione synthase compare
OLJFJH_06975 -0.6 -2.5 transcriptional regulator ArgR compare
OLJFJH_06290 -0.6 -4.9 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
OLJFJH_11460 -0.6 -5.3 NADH-quinone oxidoreductase subunit L compare
OLJFJH_14980 -0.6 -1.5 type III secretion system protein compare
OLJFJH_05865 -0.6 -4.1 ligase compare
OLJFJH_11465 -0.6 -4.3 NADH-quinone oxidoreductase subunit M compare
OLJFJH_13885 -0.6 -3.1 hypothetical protein compare
OLJFJH_11415 -0.6 -4.5 NADH-quinone oxidoreductase subunit B compare
OLJFJH_18120 -0.6 -2.1 preprotein translocase subunit YajC compare
OLJFJH_11240 -0.6 -2.7 tRNA pseudouridine(38-40) synthase TruA compare
OLJFJH_11435 -0.6 -4.9 NADH-quinone oxidoreductase subunit NuoG compare
OLJFJH_06315 -0.6 -4.4 dTDP-4-amino-4 6-dideoxygalactose transaminase compare
OLJFJH_11410 -0.6 -3.7 NADH-quinone oxidoreductase subunit NuoA compare
OLJFJH_02505 -0.6 -1.9 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
OLJFJH_16575 -0.6 -3.4 helix-turn-helix-type transcriptional regulator compare
OLJFJH_10165 -0.6 -0.9 RnfH family protein compare
OLJFJH_06305 -0.6 -4.7 glucose-1-phosphate thymidylyltransferase RfbA compare
OLJFJH_17745 -0.6 -0.8 hypothetical protein compare
OLJFJH_01960 -0.6 -1.8 DUF2946 domain-containing protein compare
OLJFJH_01270 -0.6 -3.8 catabolite repressor/activator compare
OLJFJH_01965 -0.6 -3.2 PepSY-associated TM region compare
OLJFJH_06310 -0.6 -1.9 dTDP-4-amino-4 6-dideoxy-D-galactose acyltransferase compare
OLJFJH_07830 -0.6 -2.1 TonB system transport protein ExbD compare
OLJFJH_05845 -0.6 -3.6 putative lipopolysaccharide heptosyltransferase III compare
OLJFJH_15185 -0.6 -1.2 GlsB/YeaQ/YmgE family stress response membrane protein compare
OLJFJH_13120 -0.6 -1.0 septum site-determining protein MinC compare
OLJFJH_01655 -0.6 -2.6 peptide chain release factor 3 compare
OLJFJH_17800 -0.5 -4.7 molecular chaperone HtpG compare
OLJFJH_05310 -0.5 -1.5 F0F1 ATP synthase subunit I compare
OLJFJH_02045 -0.5 -2.2 hypothetical protein compare
OLJFJH_16190 -0.5 -3.8 thioredoxin-disulfide reductase compare
OLJFJH_00775 -0.5 -3.6 polynucleotide adenylyltransferase PcnB compare
OLJFJH_05180 -0.5 -1.0 membrane protein insertion efficiency factor YidD compare
OLJFJH_05920 -0.5 -3.7 serine O-acetyltransferase compare
OLJFJH_13970 -0.5 -1.9 hypothetical protein compare
OLJFJH_11445 -0.5 -2.2 NADH-quinone oxidoreductase subunit NuoI compare
OLJFJH_04160 -0.5 -2.7 two-component system response regulator OmpR compare
OLJFJH_01615 -0.5 -4.1 phosphopentomutase compare
OLJFJH_07040 -0.5 -1.3 hypothetical protein compare
OLJFJH_03580 -0.5 -1.1 transcriptional repressor LexA compare
OLJFJH_11420 -0.5 -3.5 NADH-quinone oxidoreductase subunit C/D compare
OLJFJH_13530 -0.5 -1.6 HTH-type transcriptional regulator CysB compare
OLJFJH_11065 -0.5 -1.4 GNAT family N-acetyltransferase compare
OLJFJH_10565 -0.5 -3.7 polyphosphate kinase 1 compare
OLJFJH_07070 -0.5 -3.6 RNA polymerase factor sigma-54 compare
OLJFJH_17085 -0.5 -3.5 glucosamine-6-phosphate deaminase compare
OLJFJH_00745 -0.5 -4.4 bifunctional glycosyl transferase/transpeptidase compare
OLJFJH_06930 -0.5 -3.3 ribonuclease G compare
OLJFJH_10465 -0.5 -1.6 outer membrane protein assembly factor BamB compare
OLJFJH_10885 -0.5 -1.9 cytoplasmic protein compare
OLJFJH_17325 -0.5 -2.9 cytochrome d ubiquinol oxidase subunit II compare
OLJFJH_08405 -0.5 -2.1 hypothetical protein compare
OLJFJH_07470 -0.5 -2.7 DNA sulfur modification protein DndB compare
OLJFJH_08410 -0.5 -1.0 hypothetical protein compare
OLJFJH_14950 -0.5 -3.1 redox-regulated ATPase YchF compare
OLJFJH_13400 -0.5 -3.7 oligopeptide ABC transporter substrate-binding protein OppA compare
OLJFJH_07060 -0.5 -2.4 PTS IIA-like nitrogen regulatory protein PtsN compare
OLJFJH_04715 -0.5 -1.4 DUF1471 domain-containing protein compare
OLJFJH_10215 -0.5 -2.7 RNA polymerase sigma factor RpoE compare
OLJFJH_07770 -0.5 -0.9 hypothetical protein compare
OLJFJH_05510 -0.5 -2.4 ribosome-dependent GTPase TypA compare
OLJFJH_14195 -0.4 -1.5 hypothetical protein compare
OLJFJH_14975 -0.4 -1.6 IpaD/SipD/SspD family type III secretion system needle tip protein compare
OLJFJH_00960 -0.4 -2.0 biotin transporter BioY compare
OLJFJH_04235 -0.4 -1.6 hypothetical protein compare
OLJFJH_17550 -0.4 -1.0 hypothetical protein compare
OLJFJH_10010 -0.4 -3.4 flagellin FliC compare
OLJFJH_04990 -0.4 -1.4 mannitol-1-phosphate 5-dehydrogenase compare
OLJFJH_03200 -0.4 -2.8 TonB-dependent siderophore receptor compare
OLJFJH_04305 -0.4 -0.7 DUF2756 domain-containing protein compare
OLJFJH_04085 -0.4 -2.0 cell division protein DamX compare
OLJFJH_09430 -0.4 -1.1 type III secretion system inner rod subunit SctI compare
OLJFJH_12145 -0.4 -1.1 Aminoacyl-tRNA editing domain-containing protein compare
OLJFJH_01640 -0.4 -1.7 UPF0391 membrane protein ETA_06630 compare
OLJFJH_11440 -0.4 -2.3 NADH-quinone oxidoreductase subunit NuoH compare
OLJFJH_11275 -0.4 -2.9 colicin V production protein compare
OLJFJH_04935 -0.4 -0.7 Transcriptional regulator compare
OLJFJH_16045 -0.4 -2.9 aromatic amino acid aminotransferase compare
OLJFJH_18305 -0.4 -0.9 cold-shock protein compare
OLJFJH_05560 -0.4 -2.7 bifunctional GTP diphosphokinase/guanosine-3' 5'-bis pyrophosphate 3'-pyrophosphohydrolase compare
OLJFJH_07100 -0.4 -3.2 calcium/sodium antiporter compare
OLJFJH_05860 -0.4 -2.2 glycosyl transferase compare
OLJFJH_13945 -0.4 -1.5 acyltransferase compare
OLJFJH_05230 -0.4 -3.2 phosphate ABC transporter substrate-binding protein PstS compare
OLJFJH_01850 -0.4 -1.2 Putative cytoplasmic protein compare
OLJFJH_10560 -0.4 -2.6 exopolyphosphatase compare
OLJFJH_17830 -0.4 -1.2 prephenate dehydrogenase compare
OLJFJH_14370 -0.4 -0.8 electron transport complex subunit RsxC compare
OLJFJH_13225 -0.4 -2.2 peptide-methionine (R)-S-oxide reductase compare
OLJFJH_06515 -0.4 -0.8 twin-arginine translocase subunit TatA compare
OLJFJH_09375 -0.4 -2.0 murein hydrolase activator NlpD compare
OLJFJH_13645 -0.4 -2.4 peptide ABC transporter ATP-binding protein SapD compare
OLJFJH_10335 -0.4 -1.3 nitrogen regulatory protein P-II compare
OLJFJH_01970 -0.4 -2.6 nucleoside hydrolase compare
OLJFJH_08445 -0.4 -1.5 hypothetical protein compare
OLJFJH_10515 -0.4 -0.9 hypothetical protein compare
OLJFJH_07185 -0.4 -1.6 transcription elongation factor GreA compare
OLJFJH_05640 -0.4 -1.2 ImmA/IrrE family metallo-endopeptidase compare
OLJFJH_01710 -0.4 -1.4 hypothetical protein compare
OLJFJH_03565 -0.4 -2.9 zinc uptake transcriptional repressor Zur compare
OLJFJH_17095 -0.4 -2.7 transcriptional regulator compare


Specific Phenotypes

None in this experiment