Experiment set1S84 for Azospirillum sp. SherDot2

Compare to:

NL-CCM_agar

200 most important genes:

  gene name fitness t score description  
MPMX19_03906 -4.5 -16.0 Pca regulon regulatory protein compare
MPMX19_00530 -2.8 -4.2 Orotate phosphoribosyltransferase compare
MPMX19_00705 -2.2 -3.5 Cell division coordinator CpoB compare
MPMX19_02980 -2.0 -3.0 Hydrogen cyanide synthase subunit HcnA compare
MPMX19_02981 -2.0 -6.7 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_05387 -2.0 -3.7 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
MPMX19_02657 -2.0 -15.9 Glutamate synthase [NADPH] large chain compare
MPMX19_01497 -2.0 -4.7 hypothetical protein compare
MPMX19_05065 -2.0 -3.0 Farnesyl diphosphate synthase compare
MPMX19_06277 -2.0 -10.9 hypothetical protein compare
MPMX19_04326 -2.0 -5.1 Beta-hexosaminidase compare
MPMX19_06275 -2.0 -11.7 Argininosuccinate lyase compare
MPMX19_01053 -1.9 -4.8 Dihydroorotase compare
MPMX19_00128 -1.9 -12.3 hypothetical protein compare
MPMX19_04208 -1.9 -4.3 flagellum biosynthesis repressor protein FlbT compare
MPMX19_02658 -1.9 -12.0 Glutamate synthase [NADPH] small chain compare
MPMX19_00863 -1.8 -8.6 Flagellar basal-body rod protein FlgC compare
MPMX19_00838 -1.7 -3.5 GTP pyrophosphokinase rsh compare
MPMX19_04000 -1.7 -4.3 Flagellar motor switch protein FliG compare
MPMX19_01545 -1.7 -1.6 Lon protease compare
MPMX19_01883 -1.7 -7.1 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_00862 -1.6 -8.0 hypothetical protein compare
MPMX19_01748 -1.6 -2.1 hypothetical protein compare
MPMX19_02543 -1.6 -2.5 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX19_01054 -1.6 -5.5 Aspartate carbamoyltransferase compare
MPMX19_01495 -1.5 -2.4 hypothetical protein compare
MPMX19_06230 -1.5 -2.8 hypothetical protein compare
MPMX19_01113 -1.5 -2.8 Adaptive-response sensory-kinase SasA compare
MPMX19_04087 -1.5 -3.8 Flagellum site-determining protein YlxH compare
MPMX19_02268 -1.5 -3.8 hypothetical protein compare
MPMX19_00794 -1.5 -3.3 Transcriptional activator protein CopR compare
MPMX19_03976 -1.5 -5.2 hypothetical protein compare
MPMX19_01304 -1.5 -8.6 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX19_01560 -1.5 -3.4 3'-5' exonuclease DinG compare
MPMX19_00304 -1.4 -3.4 Phosphatidylcholine synthase compare
MPMX19_01084 -1.4 -4.9 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX19_03609 -1.4 -3.2 HTH-type transcriptional repressor NagR compare
MPMX19_02675 -1.4 -10.4 Phosphoenolpyruvate-dependent phosphotransferase system compare
MPMX19_04094 -1.4 -8.4 Flagellar M-ring protein compare
MPMX19_03635 -1.4 -1.7 DNA-binding transcriptional activator DecR compare
MPMX19_01610 -1.4 -2.1 ATP-dependent DNA helicase PcrA compare
MPMX19_04092 -1.3 -6.5 Flagellar motor switch protein FliN compare
MPMX19_00129 -1.3 -1.3 hypothetical protein compare
MPMX19_05727 -1.3 -6.2 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX19_04952 -1.3 -2.5 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_01884 -1.3 -2.9 Phosphoribosylformylglycinamidine synthase subunit PurQ compare
MPMX19_02116 -1.3 -2.3 Cold shock protein CspA compare
MPMX19_04218 -1.3 -5.3 Protein phosphatase PrpC compare
MPMX19_03787 -1.3 -1.1 hypothetical protein compare
MPMX19_00126 -1.3 -3.0 hypothetical protein compare
MPMX19_05714 -1.3 -7.2 hypothetical protein compare
MPMX19_04079 -1.3 -2.2 hypothetical protein compare
MPMX19_00858 -1.3 -4.5 Flagellar biosynthetic protein FliP compare
MPMX19_04622 -1.3 -7.2 hypothetical protein compare
MPMX19_00860 -1.2 -2.7 hypothetical protein compare
MPMX19_06644 -1.2 -10.1 GDP-mannose 4,6-dehydratase compare
MPMX19_05678 -1.2 -5.3 hypothetical protein compare
MPMX19_05357 -1.2 -8.7 hypothetical protein compare
MPMX19_06547 -1.2 -5.2 hypothetical protein compare
MPMX19_05358 -1.2 -1.9 hypothetical protein compare
MPMX19_01483 -1.2 -7.9 Flagellar basal-body rod protein FlgG compare
MPMX19_00866 -1.2 -6.5 Flagellar biosynthetic protein FliR compare
MPMX19_05111 -1.2 -1.6 PqqA binding protein compare
MPMX19_05119 -1.2 -8.6 Glucose-6-phosphate 1-dehydrogenase compare
MPMX19_05361 -1.2 -5.4 CRP-like cAMP-activated global transcriptional regulator compare
MPMX19_01630 -1.2 -3.4 Phosphoribosylamine--glycine ligase compare
MPMX19_05719 -1.2 -1.7 hypothetical protein compare
MPMX19_00714 -1.2 -5.8 Ferrous-iron efflux pump FieF compare
MPMX19_00906 -1.2 -8.4 Amidophosphoribosyltransferase compare
MPMX19_05680 -1.2 -3.4 Cell cycle response regulator CtrA compare
MPMX19_04204 -1.2 -6.2 D-alanine--D-alanyl carrier protein ligase compare
MPMX19_02177 -1.2 -3.3 Succinylornithine transaminase/acetylornithine aminotransferase compare
MPMX19_05872 -1.2 -2.7 Redox-sensitive transcriptional activator SoxR compare
MPMX19_01481 -1.2 -8.4 Flagellar motor switch protein FliM compare
MPMX19_05449 -1.1 -3.0 hypothetical protein compare
MPMX19_01493 -1.1 -2.7 Flagellar assembly protein FliX compare
MPMX19_06734 -1.1 -9.5 Alginate biosynthesis protein AlgA compare
MPMX19_06580 -1.1 -5.2 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_00867 -1.1 -8.8 Flagellar biosynthetic protein FlhB compare
MPMX19_00748 -1.1 -2.9 Organic hydroperoxide resistance transcriptional regulator compare
MPMX19_06123 -1.1 -1.5 hypothetical protein compare
MPMX19_04225 -1.1 -4.0 hypothetical protein compare
MPMX19_04276 -1.1 -1.8 hypothetical protein compare
MPMX19_00887 -1.1 -2.1 hypothetical protein compare
MPMX19_00234 -1.1 -2.8 hypothetical protein compare
MPMX19_01937 -1.1 -7.1 hypothetical protein compare
MPMX19_04623 -1.1 -3.3 hypothetical protein compare
MPMX19_04171 -1.1 -2.2 16S ribosomal RNA compare
MPMX19_04200 -1.1 -5.9 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase compare
MPMX19_01485 -1.1 -7.2 hypothetical protein compare
MPMX19_00976 -1.1 -2.1 ATP-dependent RNA helicase RhlE compare
MPMX19_01395 -1.1 -2.2 hypothetical protein compare
MPMX19_05679 -1.1 -6.4 Flagellum-specific ATP synthase compare
MPMX19_04391 -1.0 -5.6 Homoserine O-acetyltransferase compare
MPMX19_06610 -1.0 -1.7 hypothetical protein compare
MPMX19_05930 -1.0 -2.5 Dipeptidyl-peptidase 6 compare
MPMX19_01708 -1.0 -2.6 hypothetical protein compare
MPMX19_02115 -1.0 -3.2 hypothetical protein compare
MPMX19_04207 -1.0 -3.0 hypothetical protein compare
MPMX19_04223 -1.0 -7.9 hypothetical protein compare
MPMX19_01936 -1.0 -8.0 hypothetical protein compare
MPMX19_02136 -1.0 -1.5 Phage shock protein A compare
MPMX19_03613 -1.0 -2.9 N-acetylglucosamine-6-phosphate deacetylase compare
MPMX19_02668 -1.0 -6.1 RNA polymerase sigma-54 factor 2 compare
MPMX19_02118 -1.0 -3.1 hypothetical protein compare
MPMX19_00854 -1.0 -8.6 hypothetical protein compare
MPMX19_00236 -1.0 -2.6 HTH-type transcriptional regulator IscR compare
MPMX19_01822 -1.0 -4.5 2-isopropylmalate synthase compare
MPMX19_01297 -1.0 -1.8 hypothetical protein compare
MPMX19_06276 -1.0 -4.0 hypothetical protein compare
MPMX19_03599 -1.0 -3.1 2-amino-5-chloromuconic acid deaminase compare
MPMX19_00680 -1.0 -1.9 Elongation factor P--(R)-beta-lysine ligase compare
MPMX19_02951 -1.0 -1.8 Deoxyribose-phosphate aldolase 1 compare
MPMX19_00005 -1.0 -2.0 hypothetical protein compare
MPMX19_06281 -1.0 -2.7 hypothetical protein compare
MPMX19_00089 -0.9 -1.8 hypothetical protein compare
MPMX19_02737 -0.9 -4.5 Tryptophan synthase alpha chain compare
MPMX19_02460 -0.9 -8.1 Motility protein A compare
MPMX19_04258 -0.9 -2.7 hypothetical protein compare
MPMX19_01014 -0.9 -3.8 Indole-3-glycerol phosphate synthase compare
MPMX19_06746 -0.9 -1.9 Chemotaxis protein CheW compare
MPMX19_02234 -0.9 -3.8 hypothetical protein compare
MPMX19_00311 -0.9 -7.7 hypothetical protein compare
MPMX19_06545 -0.9 -7.7 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase compare
MPMX19_04115 -0.9 -1.1 Sensor histidine kinase RcsC compare
MPMX19_04325 -0.9 -3.6 hypothetical protein compare
MPMX19_02171 -0.9 -4.7 putative ABC transporter ATP-binding protein YejF compare
MPMX19_05355 -0.9 -2.2 Transcriptional regulator SlyA compare
MPMX19_04968 -0.9 -2.1 hypothetical protein compare
MPMX19_02553 -0.9 -3.8 Protein-export protein SecB compare
MPMX19_04089 -0.9 -6.9 Flagellar biosynthesis protein FlhA compare
MPMX19_02987 -0.9 -1.9 hypothetical protein compare
MPMX19_01494 -0.9 -5.4 Flagellar P-ring protein compare
MPMX19_01627 -0.9 -3.4 hypothetical protein compare
MPMX19_00695 -0.9 -2.3 putative transcriptional regulatory protein compare
MPMX19_04198 -0.9 -6.4 hypothetical protein compare
MPMX19_06508 -0.9 -2.4 Nitrilotriacetate monooxygenase component A compare
MPMX19_06544 -0.9 -6.8 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) compare
MPMX19_01479 -0.9 -3.7 hypothetical protein compare
MPMX19_04222 -0.9 -6.5 hypothetical protein compare
MPMX19_01486 -0.9 -4.8 Flagellar L-ring protein compare
MPMX19_01496 -0.9 -5.4 hypothetical protein compare
MPMX19_03529 -0.9 -3.4 2,3-diketo-L-gulonate-binding periplasmic protein YiaO compare
MPMX19_01249 -0.9 -1.3 Periplasmic serine endoprotease DegP compare
MPMX19_00334 -0.9 -1.9 hypothetical protein compare
MPMX19_02300 -0.8 -2.0 Transcription elongation factor GreA compare
MPMX19_02267 -0.8 -1.3 hypothetical protein compare
MPMX19_01834 -0.8 -1.7 hypothetical protein compare
MPMX19_04010 -0.8 -2.1 Isoaspartyl peptidase compare
MPMX19_06090 -0.8 -1.6 Pyruvate dehydrogenase complex repressor compare
MPMX19_04224 -0.8 -7.2 hypothetical protein compare
MPMX19_00266 -0.8 -1.7 hypothetical protein compare
MPMX19_03975 -0.8 -3.2 Putative thiosulfate sulfurtransferase compare
MPMX19_04199 -0.8 -5.1 Pseudaminic acid synthase compare
MPMX19_00576 -0.8 -1.8 hypothetical protein compare
MPMX19_04090 -0.8 -5.4 Anaerobic nitric oxide reductase transcription regulator NorR compare
MPMX19_02223 -0.8 -6.0 Ammonia channel compare
MPMX19_06099 -0.8 -5.3 hypothetical protein compare
MPMX19_01111 -0.8 -2.0 Sensory histidine kinase/phosphatase NtrB compare
MPMX19_01577 -0.8 -2.5 hypothetical protein compare
MPMX19_04093 -0.8 -2.3 hypothetical protein compare
MPMX19_02084 -0.8 -1.2 hypothetical protein compare
MPMX19_04624 -0.8 -4.3 hypothetical protein compare
MPMX19_04864 -0.8 -2.2 hypothetical protein compare
MPMX19_05023 -0.8 -1.3 hypothetical protein compare
MPMX19_00094 -0.8 -1.2 hypothetical protein compare
MPMX19_01277 -0.8 -4.3 hypothetical protein compare
MPMX19_00050 -0.8 -2.9 Pyridoxal phosphate homeostasis protein compare
MPMX19_01777 -0.8 -2.0 2-aminoadipate transaminase compare
MPMX19_01714 -0.8 -1.3 tRNA-modifying protein YgfZ compare
MPMX19_04206 -0.8 -3.2 3-oxoacyl-[acyl-carrier-protein] synthase 3 compare
MPMX19_04825 -0.8 -1.5 hypothetical protein compare
MPMX19_04114 -0.8 -2.7 hypothetical protein compare
MPMX19_03421 -0.8 -1.6 hypothetical protein compare
MPMX19_01565 -0.8 -1.7 hypothetical protein compare
MPMX19_04963 -0.8 -0.9 Cysteine desulfurase IscS compare
MPMX19_04861 -0.8 -1.7 hypothetical protein compare
MPMX19_00868 -0.8 -6.7 Sensor kinase CckA compare
MPMX19_03454 -0.8 -3.0 Nitrate import ATP-binding protein NrtC compare
MPMX19_00262 -0.8 -1.5 Thiazole synthase compare
MPMX19_06546 -0.8 -1.8 hypothetical protein compare
MPMX19_06581 -0.8 -4.8 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 2 compare
MPMX19_01377 -0.8 -3.9 Outer membrane protein assembly factor BamA compare
MPMX19_01654 -0.8 -4.9 HTH-type transcriptional regulator IscR compare
MPMX19_00912 -0.8 -5.3 Bifunctional uridylyltransferase/uridylyl-removing enzyme compare
MPMX19_03618 -0.7 -3.1 hypothetical protein compare
MPMX19_04913 -0.7 -1.3 hypothetical protein compare
MPMX19_06577 -0.7 -5.0 hypothetical protein compare
MPMX19_03197 -0.7 -1.9 hypothetical protein compare
MPMX19_02195 -0.7 -3.3 Recombination protein RecR compare
MPMX19_00904 -0.7 -4.3 DNA repair protein RadA compare
MPMX19_01484 -0.7 -3.8 Flagellar basal-body rod protein FlgG compare
MPMX19_00696 -0.7 -3.3 Crossover junction endodeoxyribonuclease RuvC compare
MPMX19_04205 -0.7 -1.9 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_04835 -0.7 -1.9 hypothetical protein compare
MPMX19_06014 -0.7 -4.1 Histidinol-phosphate aminotransferase compare
MPMX19_02979 -0.7 -2.8 Hydrogen cyanide synthase subunit HcnB compare
MPMX19_04210 -0.7 -1.8 hypothetical protein compare
MPMX19_03646 -0.7 -3.1 Histidinol-phosphate aminotransferase compare
MPMX19_00846 -0.7 -1.6 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment