Experiment set1S83 for Azospirillum sp. SherDot2

Compare to:

NL-CCM_agar

200 most important genes:

  gene name fitness t score description  
MPMX19_03906 -3.8 -18.0 Pca regulon regulatory protein compare
MPMX19_01054 -2.2 -6.9 Aspartate carbamoyltransferase compare
MPMX19_06277 -2.2 -11.6 hypothetical protein compare
MPMX19_01084 -2.1 -6.3 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX19_00260 -2.1 -3.1 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_00705 -2.1 -3.9 Cell division coordinator CpoB compare
MPMX19_02658 -2.0 -12.7 Glutamate synthase [NADPH] small chain compare
MPMX19_02981 -1.9 -5.7 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_01883 -1.9 -8.3 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_03734 -1.9 -2.4 RutC family protein YjgH compare
MPMX19_02980 -1.8 -2.1 Hydrogen cyanide synthase subunit HcnA compare
MPMX19_02657 -1.8 -14.9 Glutamate synthase [NADPH] large chain compare
MPMX19_06275 -1.8 -11.2 Argininosuccinate lyase compare
MPMX19_00530 -1.7 -3.5 Orotate phosphoribosyltransferase compare
MPMX19_02268 -1.7 -4.1 hypothetical protein compare
MPMX19_01053 -1.7 -4.5 Dihydroorotase compare
MPMX19_01304 -1.6 -9.7 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX19_00128 -1.6 -10.6 hypothetical protein compare
MPMX19_04205 -1.5 -4.4 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_05044 -1.5 -2.6 hypothetical protein compare
MPMX19_02234 -1.5 -5.5 hypothetical protein compare
MPMX19_02267 -1.5 -1.9 hypothetical protein compare
MPMX19_01884 -1.5 -2.8 Phosphoribosylformylglycinamidine synthase subunit PurQ compare
MPMX19_05727 -1.4 -6.7 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX19_00862 -1.4 -8.5 hypothetical protein compare
MPMX19_02514 -1.4 -1.7 hypothetical protein compare
MPMX19_06819 -1.4 -3.0 hypothetical protein compare
MPMX19_00304 -1.4 -3.1 Phosphatidylcholine synthase compare
MPMX19_03976 -1.3 -4.6 hypothetical protein compare
MPMX19_00126 -1.3 -3.2 hypothetical protein compare
MPMX19_00906 -1.3 -9.6 Amidophosphoribosyltransferase compare
MPMX19_02675 -1.3 -10.1 Phosphoenolpyruvate-dependent phosphotransferase system compare
MPMX19_04115 -1.3 -2.3 Sensor histidine kinase RcsC compare
MPMX19_05680 -1.3 -3.8 Cell cycle response regulator CtrA compare
MPMX19_04392 -1.2 -2.6 Bifunctional methionine biosynthesis protein MetXA/MetW compare
MPMX19_00608 -1.2 -1.3 hypothetical protein compare
MPMX19_00694 -1.2 -2.4 2',3'-cyclic-nucleotide 2'-phosphodiesterase compare
MPMX19_04204 -1.2 -6.9 D-alanine--D-alanyl carrier protein ligase compare
MPMX19_01481 -1.2 -9.2 Flagellar motor switch protein FliM compare
MPMX19_03722 -1.2 -2.3 hypothetical protein compare
MPMX19_04225 -1.2 -4.0 hypothetical protein compare
MPMX19_04000 -1.2 -3.4 Flagellar motor switch protein FliG compare
MPMX19_00864 -1.2 -3.9 Flagellar hook-basal body complex protein FliE compare
MPMX19_04092 -1.2 -6.3 Flagellar motor switch protein FliN compare
MPMX19_02235 -1.2 -3.0 tRNA-Ala compare
MPMX19_02303 -1.1 -2.5 hypothetical protein compare
MPMX19_02979 -1.1 -3.8 Hydrogen cyanide synthase subunit HcnB compare
MPMX19_04898 -1.1 -2.7 Transcriptional regulatory protein LnrK compare
MPMX19_00838 -1.1 -2.5 GTP pyrophosphokinase rsh compare
MPMX19_01545 -1.1 -1.6 Lon protease compare
MPMX19_02668 -1.1 -6.8 RNA polymerase sigma-54 factor 2 compare
MPMX19_02177 -1.1 -3.3 Succinylornithine transaminase/acetylornithine aminotransferase compare
MPMX19_05831 -1.1 -3.0 Protein/nucleic acid deglycase 2 compare
MPMX19_01480 -1.1 -4.4 hypothetical protein compare
MPMX19_05023 -1.1 -1.8 hypothetical protein compare
MPMX19_02613 -1.1 -2.0 hypothetical protein compare
MPMX19_00794 -1.1 -3.2 Transcriptional activator protein CopR compare
MPMX19_04094 -1.1 -6.7 Flagellar M-ring protein compare
MPMX19_00695 -1.1 -2.8 putative transcriptional regulatory protein compare
MPMX19_04207 -1.1 -3.2 hypothetical protein compare
MPMX19_00714 -1.1 -5.1 Ferrous-iron efflux pump FieF compare
MPMX19_05445 -1.0 -2.6 tRNA-Glu compare
MPMX19_05714 -1.0 -6.1 hypothetical protein compare
MPMX19_06768 -1.0 -2.4 hypothetical protein compare
MPMX19_04623 -1.0 -4.1 hypothetical protein compare
MPMX19_06546 -1.0 -2.4 hypothetical protein compare
MPMX19_04087 -1.0 -2.7 Flagellum site-determining protein YlxH compare
MPMX19_01349 -1.0 -5.3 hypothetical protein compare
MPMX19_00867 -1.0 -8.1 Flagellar biosynthetic protein FlhB compare
MPMX19_05678 -1.0 -5.1 hypothetical protein compare
MPMX19_00854 -1.0 -9.0 hypothetical protein compare
MPMX19_01616 -1.0 -2.2 hypothetical protein compare
MPMX19_06236 -1.0 -3.0 hypothetical protein compare
MPMX19_01486 -1.0 -5.8 Flagellar L-ring protein compare
MPMX19_02951 -1.0 -1.6 Deoxyribose-phosphate aldolase 1 compare
MPMX19_04258 -1.0 -3.4 hypothetical protein compare
MPMX19_05921 -1.0 -1.9 hypothetical protein compare
MPMX19_00858 -1.0 -2.5 Flagellar biosynthetic protein FliP compare
MPMX19_00504 -1.0 -3.7 ATP-dependent Clp protease adapter protein ClpS compare
MPMX19_02543 -1.0 -1.5 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX19_05679 -1.0 -6.0 Flagellum-specific ATP synthase compare
MPMX19_01560 -1.0 -2.4 3'-5' exonuclease DinG compare
MPMX19_01483 -1.0 -6.4 Flagellar basal-body rod protein FlgG compare
MPMX19_00680 -0.9 -2.0 Elongation factor P--(R)-beta-lysine ligase compare
MPMX19_04089 -0.9 -7.7 Flagellar biosynthesis protein FlhA compare
MPMX19_02460 -0.9 -8.3 Motility protein A compare
MPMX19_05119 -0.9 -7.1 Glucose-6-phosphate 1-dehydrogenase compare
MPMX19_00311 -0.9 -7.9 hypothetical protein compare
MPMX19_00020 -0.9 -1.6 hypothetical protein compare
MPMX19_06967 -0.9 -1.7 hypothetical protein compare
MPMX19_04223 -0.9 -7.3 hypothetical protein compare
MPMX19_02511 -0.9 -1.4 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase compare
MPMX19_04079 -0.9 -1.1 hypothetical protein compare
MPMX19_03226 -0.9 -2.6 hypothetical protein compare
MPMX19_04222 -0.9 -7.3 hypothetical protein compare
MPMX19_06276 -0.9 -4.1 hypothetical protein compare
MPMX19_04622 -0.9 -5.7 hypothetical protein compare
MPMX19_04948 -0.9 -1.9 HTH-type transcriptional regulator GltR compare
MPMX19_04093 -0.9 -3.0 hypothetical protein compare
MPMX19_04208 -0.9 -2.3 flagellum biosynthesis repressor protein FlbT compare
MPMX19_04199 -0.9 -5.7 Pseudaminic acid synthase compare
MPMX19_06179 -0.9 -1.7 putative SURF1-like protein compare
MPMX19_04010 -0.9 -2.3 Isoaspartyl peptidase compare
MPMX19_01485 -0.9 -6.6 hypothetical protein compare
MPMX19_00866 -0.9 -5.1 Flagellar biosynthetic protein FliR compare
MPMX19_05798 -0.9 -1.4 HTH-type transcriptional repressor NanR compare
MPMX19_04206 -0.9 -3.5 3-oxoacyl-[acyl-carrier-protein] synthase 3 compare
MPMX19_00912 -0.9 -6.2 Bifunctional uridylyltransferase/uridylyl-removing enzyme compare
MPMX19_01495 -0.9 -2.0 hypothetical protein compare
MPMX19_01936 -0.9 -7.1 hypothetical protein compare
MPMX19_02779 -0.9 -2.0 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_03859 -0.9 -2.2 hypothetical protein compare
MPMX19_04090 -0.9 -5.9 Anaerobic nitric oxide reductase transcription regulator NorR compare
MPMX19_01113 -0.9 -2.0 Adaptive-response sensory-kinase SasA compare
MPMX19_03609 -0.9 -1.8 HTH-type transcriptional repressor NagR compare
MPMX19_01014 -0.9 -3.4 Indole-3-glycerol phosphate synthase compare
MPMX19_04903 -0.9 -3.1 hypothetical protein compare
MPMX19_06777 -0.8 -2.1 hypothetical protein compare
MPMX19_01939 -0.8 -2.8 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
MPMX19_00089 -0.8 -0.9 hypothetical protein compare
MPMX19_06539 -0.8 -1.5 hypothetical protein compare
MPMX19_02218 -0.8 -1.4 hypothetical protein compare
MPMX19_03806 -0.8 -2.2 hypothetical protein compare
MPMX19_02618 -0.8 -1.7 Transcriptional regulatory protein BaeR compare
MPMX19_00689 -0.8 -2.0 Glyceraldehyde-3-phosphate dehydrogenase 1 compare
MPMX19_01125 -0.8 -1.6 hypothetical protein compare
MPMX19_06099 -0.8 -5.2 hypothetical protein compare
MPMX19_02300 -0.8 -2.1 Transcription elongation factor GreA compare
MPMX19_01630 -0.8 -2.9 Phosphoribosylamine--glycine ligase compare
MPMX19_01314 -0.8 -4.2 hypothetical protein compare
MPMX19_00868 -0.8 -7.0 Sensor kinase CckA compare
MPMX19_06337 -0.8 -2.7 Arsenic resistance transcriptional regulator ArsR1 compare
MPMX19_01494 -0.8 -5.3 Flagellar P-ring protein compare
MPMX19_02553 -0.8 -3.2 Protein-export protein SecB compare
MPMX19_03871 -0.8 -1.8 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_04289 -0.8 -4.5 hypothetical protein compare
MPMX19_02223 -0.8 -5.9 Ammonia channel compare
MPMX19_04200 -0.8 -4.3 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase compare
MPMX19_04198 -0.8 -6.1 hypothetical protein compare
MPMX19_04835 -0.8 -1.8 hypothetical protein compare
MPMX19_01777 -0.8 -2.1 2-aminoadipate transaminase compare
MPMX19_06580 -0.8 -3.8 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_05387 -0.8 -1.6 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
MPMX19_06544 -0.8 -6.1 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) compare
MPMX19_04954 -0.8 -2.0 Putative hydro-lyase compare
MPMX19_01937 -0.8 -5.0 hypothetical protein compare
MPMX19_06746 -0.8 -1.1 Chemotaxis protein CheW compare
MPMX19_00996 -0.8 -3.0 Metalloprotease MmpA compare
MPMX19_00478 -0.8 -1.5 putative protein RP812 compare
MPMX19_00134 -0.8 -2.3 hypothetical protein compare
MPMX19_01394 -0.8 -0.6 hypothetical protein compare
MPMX19_02551 -0.7 -1.7 hypothetical protein compare
MPMX19_00061 -0.7 -2.1 L-lysine 2,3-aminomutase compare
MPMX19_06353 -0.7 -0.8 hypothetical protein compare
MPMX19_00447 -0.7 -2.3 hypothetical protein compare
MPMX19_06508 -0.7 -1.9 Nitrilotriacetate monooxygenase component A compare
MPMX19_01479 -0.7 -3.5 hypothetical protein compare
MPMX19_02664 -0.7 -1.1 Arabinose 5-phosphate isomerase KdsD compare
MPMX19_06373 -0.7 -1.5 Lipoprotein signal peptidase compare
MPMX19_06926 -0.7 -2.2 hypothetical protein compare
MPMX19_01423 -0.7 -2.0 hypothetical protein compare
MPMX19_04276 -0.7 -1.8 hypothetical protein compare
MPMX19_00258 -0.7 -1.7 Protein ImuB compare
MPMX19_03739 -0.7 -2.8 hypothetical protein compare
MPMX19_06581 -0.7 -4.5 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 2 compare
MPMX19_00863 -0.7 -4.0 Flagellar basal-body rod protein FlgC compare
MPMX19_04088 -0.7 -2.4 Signal recognition particle 54 kDa protein compare
MPMX19_06582 -0.7 -5.6 hypothetical protein compare
MPMX19_05412 -0.7 -4.8 Glutathione import ATP-binding protein GsiA compare
MPMX19_01822 -0.7 -3.4 2-isopropylmalate synthase compare
MPMX19_06545 -0.7 -5.9 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase compare
MPMX19_02950 -0.7 -2.9 Deoxyribose operon repressor compare
MPMX19_04701 -0.7 -1.8 Transcriptional regulatory protein FixJ compare
MPMX19_06834 -0.7 -3.7 Vitamin B6 salvage pathway transcriptional repressor PtsJ compare
MPMX19_01321 -0.7 -2.6 tRNA-Cys compare
MPMX19_01796 -0.7 -1.2 hypothetical protein compare
MPMX19_06644 -0.7 -6.0 GDP-mannose 4,6-dehydratase compare
MPMX19_02538 -0.7 -1.4 hypothetical protein compare
MPMX19_01748 -0.7 -1.7 hypothetical protein compare
MPMX19_02803 -0.7 -2.0 putative FAD-linked oxidoreductase compare
MPMX19_05997 -0.7 -1.3 hypothetical protein compare
MPMX19_01482 -0.7 -4.8 hypothetical protein compare
MPMX19_04224 -0.7 -6.1 hypothetical protein compare
MPMX19_04112 -0.7 -2.8 hypothetical protein compare
MPMX19_00031 -0.7 -1.6 hypothetical protein compare
MPMX19_01111 -0.7 -1.7 Sensory histidine kinase/phosphatase NtrB compare
MPMX19_04212 -0.7 -5.5 Photosystem I assembly protein Ycf3 compare
MPMX19_01342 -0.7 -1.3 hypothetical protein compare
MPMX19_01159 -0.7 -5.2 Presqualene diphosphate synthase compare
MPMX19_00129 -0.7 -0.9 hypothetical protein compare
MPMX19_03822 -0.7 -1.4 Sulfur carrier protein FdhD compare
MPMX19_02195 -0.7 -3.4 Recombination protein RecR compare
MPMX19_02202 -0.7 -1.5 hypothetical protein compare
MPMX19_06892 -0.7 -2.1 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_06577 -0.7 -4.9 hypothetical protein compare
MPMX19_00366 -0.7 -2.6 hypothetical protein compare
MPMX19_05104 -0.7 -1.6 hypothetical protein compare
MPMX19_05065 -0.6 -1.4 Farnesyl diphosphate synthase compare
MPMX19_04210 -0.6 -1.2 hypothetical protein compare
MPMX19_05690 -0.6 -3.8 Protein phosphotransferase ChpT compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm_agar experiments