Experiment set1S83 for Azospirillum sp. SherDot2

Compare to:

NL-CCM_agar

200 most detrimental genes:

  gene name fitness t score description  
MPMX19_03072 +1.0 2.6 hypothetical protein compare
MPMX19_00544 +1.0 3.0 hypothetical protein compare
MPMX19_04551 +0.9 2.1 HTH-type transcriptional repressor RspR compare
MPMX19_00208 +0.9 2.7 hypothetical protein compare
MPMX19_00725 +0.9 5.8 Transcriptional regulatory protein ros compare
MPMX19_02039 +0.9 5.1 hypothetical protein compare
MPMX19_06519 +0.9 1.9 HTH-type transcriptional repressor NagR compare
MPMX19_06888 +0.8 4.0 hypothetical protein compare
MPMX19_00212 +0.8 6.9 Nitrogen fixation regulation protein FixK compare
MPMX19_05623 +0.8 4.1 Photosynthetic apparatus regulatory protein RegA compare
MPMX19_05181 +0.7 2.2 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_01045 +0.7 6.0 hypothetical protein compare
MPMX19_05068 +0.7 2.7 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA compare
MPMX19_06989 +0.7 1.9 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_01062 +0.7 2.6 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_03800 +0.7 2.4 hypothetical protein compare
MPMX19_00297 +0.7 1.8 4-carboxy-4-hydroxy-2-oxoadipate aldolase compare
MPMX19_00210 +0.7 3.6 hypothetical protein compare
MPMX19_05221 +0.7 2.9 hypothetical protein compare
MPMX19_03195 +0.7 1.5 hypothetical protein compare
MPMX19_02787 +0.7 3.0 (R)-benzylsuccinyl-CoA dehydrogenase compare
MPMX19_04913 +0.7 1.7 hypothetical protein compare
MPMX19_00206 +0.7 5.0 Cytochrome c oxidase subunit 1, bacteroid compare
MPMX19_03063 +0.7 2.4 hypothetical protein compare
MPMX19_05470 +0.7 2.8 hypothetical protein compare
MPMX19_05005 +0.6 3.2 hypothetical protein compare
MPMX19_01067 +0.6 1.9 hypothetical protein compare
MPMX19_06498 +0.6 2.5 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_04633 +0.6 2.7 hypothetical protein compare
MPMX19_01864 +0.6 1.8 Regulatory protein AtoC compare
MPMX19_01153 +0.6 2.2 hypothetical protein compare
MPMX19_02085 +0.6 2.5 hypothetical protein compare
MPMX19_00687 +0.6 1.7 hypothetical protein compare
MPMX19_05882 +0.6 2.8 hypothetical protein compare
MPMX19_06327 +0.6 1.6 hypothetical protein compare
MPMX19_06042 +0.6 3.3 hypothetical protein compare
MPMX19_04043 +0.6 2.3 Aldehyde-alcohol dehydrogenase compare
MPMX19_04743 +0.6 2.4 Formyltransferase/hydrolase complex subunit D compare
MPMX19_04694 +0.6 1.9 Na(+)/H(+) antiporter subunit E1 compare
MPMX19_03169 +0.6 1.5 Dihydroanticapsin 7-dehydrogenase compare
MPMX19_03897 +0.6 2.3 hypothetical protein compare
MPMX19_01050 +0.6 1.2 hypothetical protein compare
MPMX19_03262 +0.5 1.9 putative HTH-type transcriptional repressor ExuR compare
MPMX19_01840 +0.5 3.7 Nif-specific regulatory protein compare
MPMX19_04902 +0.5 2.5 hypothetical protein compare
MPMX19_01875 +0.5 2.5 hypothetical protein compare
MPMX19_06381 +0.5 1.2 putative manganese efflux pump MntP compare
MPMX19_03934 +0.5 2.2 hypothetical protein compare
MPMX19_01653 +0.5 2.9 Serine acetyltransferase compare
MPMX19_03715 +0.5 2.5 Response regulator ArlR compare
MPMX19_00956 +0.5 2.0 hypothetical protein compare
MPMX19_03710 +0.5 1.8 Glycine cleavage system transcriptional activator compare
MPMX19_01261 +0.5 4.0 Regulator of RpoS compare
MPMX19_06467 +0.5 2.7 hypothetical protein compare
MPMX19_06351 +0.5 1.1 Arsenate reductase compare
MPMX19_01643 +0.5 3.0 hypothetical protein compare
MPMX19_04740 +0.5 2.0 hypothetical protein compare
MPMX19_05622 +0.5 4.1 Sensor histidine kinase RegB compare
MPMX19_01392 +0.5 4.0 hypothetical protein compare
MPMX19_03694 +0.5 1.2 hypothetical protein compare
MPMX19_04986 +0.5 1.9 hypothetical protein compare
MPMX19_00049 +0.5 2.0 hypothetical protein compare
MPMX19_04731 +0.5 2.4 hypothetical protein compare
MPMX19_05176 +0.5 1.4 4-hydroxy-3-prenylphenylpyruvate oxygenase/4-hydroxy-3-prenylbenzoate synthase compare
MPMX19_04053 +0.5 1.7 Transcriptional regulatory protein OmpR compare
MPMX19_04531 +0.5 1.8 hypothetical protein compare
MPMX19_05534 +0.5 1.1 DNA gyrase inhibitor YacG compare
MPMX19_04682 +0.5 1.2 hypothetical protein compare
MPMX19_01834 +0.5 1.5 hypothetical protein compare
MPMX19_05745 +0.5 3.8 Sensor histidine kinase RcsC compare
MPMX19_02092 +0.5 1.7 hypothetical protein compare
MPMX19_06193 +0.5 1.2 Flagellar hook-basal body complex protein FliE compare
MPMX19_06610 +0.5 1.2 hypothetical protein compare
MPMX19_06156 +0.5 1.1 hypothetical protein compare
MPMX19_04081 +0.5 1.2 hypothetical protein compare
MPMX19_06917 +0.5 1.8 HTH-type transcriptional regulator PgrR compare
MPMX19_02911 +0.5 1.5 hypothetical protein compare
MPMX19_03757 +0.5 1.3 D-ribose pyranase compare
MPMX19_04963 +0.5 1.3 Cysteine desulfurase IscS compare
MPMX19_02608 +0.5 2.1 hypothetical protein compare
MPMX19_03093 +0.5 1.9 Manganese import ATP-binding protein ScaC compare
MPMX19_04726 +0.5 1.8 Glycine betaine/choline transport system permease protein OusW compare
MPMX19_05282 +0.5 1.8 1,3,6,8-tetrahydroxynaphthalene synthase compare
MPMX19_01083 +0.4 1.8 hypothetical protein compare
MPMX19_04161 +0.4 1.3 hypothetical protein compare
MPMX19_00957 +0.4 2.0 Phosphoribosyl-ATP pyrophosphatase compare
MPMX19_04336 +0.4 2.6 Cytochrome c2 compare
MPMX19_00207 +0.4 2.4 hypothetical protein compare
MPMX19_03129 +0.4 3.2 Citrate/malate transporter compare
MPMX19_06235 +0.4 1.4 Glycine cleavage system transcriptional activator compare
MPMX19_01391 +0.4 2.3 hypothetical protein compare
MPMX19_01918 +0.4 1.0 tRNA-Ala compare
MPMX19_06472 +0.4 2.6 Alkanesulfonate monooxygenase compare
MPMX19_00970 +0.4 2.1 hypothetical protein compare
MPMX19_04077 +0.4 2.0 Adaptive-response sensory-kinase SasA compare
MPMX19_02091 +0.4 1.9 hypothetical protein compare
MPMX19_02404 +0.4 1.4 LexA repressor compare
MPMX19_00267 +0.4 1.8 hypothetical protein compare
MPMX19_03868 +0.4 1.4 Xylitol-binding protein compare
MPMX19_01766 +0.4 2.4 Phosphate-specific transport system accessory protein PhoU compare
MPMX19_06911 +0.4 2.0 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_05906 +0.4 0.8 hypothetical protein compare
MPMX19_04700 +0.4 1.8 Adaptive-response sensory-kinase SasA compare
MPMX19_00035 +0.4 2.5 hypothetical protein compare
MPMX19_04540 +0.4 2.3 hypothetical protein compare
MPMX19_00852 +0.4 1.1 hypothetical protein compare
MPMX19_06223 +0.4 2.0 HTH-type transcriptional regulator GbpR compare
MPMX19_05779 +0.4 1.1 Beta-ketoadipyl-CoA thiolase compare
MPMX19_00423 +0.4 1.8 (E)-2-((N-methylformamido)methylene)succinate hydrolase compare
MPMX19_06513 +0.4 2.5 putative N-succinyldiaminopimelate aminotransferase DapC compare
MPMX19_02063 +0.4 2.0 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_02674 +0.4 1.0 NADH:quinone reductase compare
MPMX19_06843 +0.4 1.7 hypothetical protein compare
MPMX19_03054 +0.4 1.7 putative ABC transporter permease protein NosY compare
MPMX19_02502 +0.4 1.9 hypothetical protein compare
MPMX19_06856 +0.4 2.6 Riboflavin transporter compare
MPMX19_03888 +0.4 2.9 Glutathione hydrolase-like YwrD proenzyme compare
MPMX19_03846 +0.4 1.1 hypothetical protein compare
MPMX19_06141 +0.4 1.7 Intermembrane phospholipid transport system permease protein MlaE compare
MPMX19_06567 +0.4 1.8 hypothetical protein compare
MPMX19_04051 +0.4 1.9 Alcohol dehydrogenase compare
MPMX19_06106 +0.4 1.8 Bacteriohemerythrin compare
MPMX19_03596 +0.4 3.2 C4-dicarboxylate transport sensor protein DctB compare
MPMX19_04557 +0.4 2.2 Na(+)/H(+) antiporter NhaA compare
MPMX19_01701 +0.4 2.7 hypothetical protein compare
MPMX19_06981 +0.4 1.6 hypothetical protein compare
MPMX19_06326 +0.4 1.4 hypothetical protein compare
MPMX19_04514 +0.4 2.7 hypothetical protein compare
MPMX19_03558 +0.4 1.5 hypothetical protein compare
MPMX19_00655 +0.4 1.9 hypothetical protein compare
MPMX19_03375 +0.4 1.8 Outer membrane protein TolC compare
MPMX19_06521 +0.4 1.7 Putative aliphatic sulfonates-binding protein compare
MPMX19_02172 +0.4 1.9 putative GTPase compare
MPMX19_00074 +0.4 1.3 Electron transfer flavoprotein subunit beta compare
MPMX19_06456 +0.4 0.7 hypothetical protein compare
MPMX19_06476 +0.4 2.2 HTH-type transcriptional regulator ArgP compare
MPMX19_01957 +0.4 2.7 Sensor histidine kinase RcsC compare
MPMX19_05930 +0.4 1.3 Dipeptidyl-peptidase 6 compare
MPMX19_00094 +0.4 0.7 hypothetical protein compare
MPMX19_04973 +0.4 2.0 hypothetical protein compare
MPMX19_03825 +0.4 0.5 IS5 family transposase IS4811 compare
MPMX19_02999 +0.4 1.5 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_03287 +0.4 2.3 6-aminohexanoate-cyclic-dimer hydrolase compare
MPMX19_00839 +0.4 1.1 hypothetical protein compare
MPMX19_00472 +0.4 1.0 Protein HesB, heterocyst compare
MPMX19_02492 +0.4 1.2 hypothetical protein compare
MPMX19_01061 +0.4 2.0 Glutathione-regulated potassium-efflux system protein KefC compare
MPMX19_06121 +0.4 2.0 hypothetical protein compare
MPMX19_02011 +0.4 1.1 RNA helicase CrhR compare
MPMX19_03915 +0.4 1.3 hypothetical protein compare
MPMX19_02780 +0.4 2.0 hypothetical protein compare
MPMX19_04493 +0.4 1.7 PCP degradation transcriptional activation protein compare
MPMX19_01765 +0.4 2.4 Phosphoribosyl-ATP pyrophosphatase compare
MPMX19_06380 +0.4 1.9 hypothetical protein compare
MPMX19_01073 +0.4 1.2 5'-nucleotidase compare
MPMX19_06923 +0.4 1.5 hypothetical protein compare
MPMX19_00788 +0.4 1.8 Chemotaxis protein CheY compare
MPMX19_06471 +0.4 1.3 Glyoxylate/hydroxypyruvate reductase A compare
MPMX19_03434 +0.4 1.9 hypothetical protein compare
MPMX19_03531 +0.4 1.5 PCP degradation transcriptional activation protein compare
MPMX19_03561 +0.4 1.6 Propane 2-monooxygenase, effector component compare
MPMX19_05293 +0.4 1.9 hypothetical protein compare
MPMX19_00773 +0.4 1.7 hypothetical protein compare
MPMX19_01719 +0.4 1.1 Putative fluoride ion transporter CrcB compare
MPMX19_04876 +0.4 2.0 hypothetical protein compare
MPMX19_02611 +0.4 1.7 hypothetical protein compare
MPMX19_06808 +0.4 0.8 HTH-type transcriptional regulator DmlR compare
MPMX19_03425 +0.4 1.1 hypothetical protein compare
MPMX19_02909 +0.4 1.9 Cytochrome c oxidase subunit 3 compare
MPMX19_04279 +0.4 2.2 hypothetical protein compare
MPMX19_04120 +0.4 1.2 hypothetical protein compare
MPMX19_06579 +0.4 1.0 Carnitine monooxygenase oxygenase subunit compare
MPMX19_01059 +0.4 0.7 hypothetical protein compare
MPMX19_00211 +0.3 1.4 putative copper-importing P-type ATPase A compare
MPMX19_00878 +0.3 1.8 Guanidinium exporter compare
MPMX19_00615 +0.3 1.6 hypothetical protein compare
MPMX19_06501 +0.3 2.8 hypothetical protein compare
MPMX19_06773 +0.3 1.5 2-(R)-hydroxypropyl-CoM dehydrogenase compare
MPMX19_05934 +0.3 1.6 Arylesterase compare
MPMX19_00513 +0.3 2.5 Phosphotransferase RcsD compare
MPMX19_02127 +0.3 2.1 hypothetical protein compare
MPMX19_02679 +0.3 1.1 hypothetical protein compare
MPMX19_06488 +0.3 1.1 Taurine-binding periplasmic protein compare
MPMX19_04240 +0.3 0.9 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_06932 +0.3 1.5 hypothetical protein compare
MPMX19_03756 +0.3 0.7 hypothetical protein compare
MPMX19_03893 +0.3 2.5 hypothetical protein compare
MPMX19_01444 +0.3 2.3 hypothetical protein compare
MPMX19_04724 +0.3 1.5 hypothetical protein compare
MPMX19_05624 +0.3 0.7 hypothetical protein compare
MPMX19_02263 +0.3 2.3 hypothetical protein compare
MPMX19_05157 +0.3 1.7 hypothetical protein compare
MPMX19_03655 +0.3 0.8 hypothetical protein compare
MPMX19_05621 +0.3 1.7 ABC transporter ATP-binding protein NatA compare
MPMX19_00900 +0.3 3.0 hypothetical protein compare
MPMX19_03250 +0.3 1.6 Glycine cleavage system transcriptional activator compare
MPMX19_00510 +0.3 1.9 Sensor histidine kinase RcsC compare
MPMX19_00244 +0.3 1.5 hypothetical protein compare
MPMX19_01832 +0.3 1.5 hypothetical protein compare
MPMX19_02686 +0.3 1.7 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm_agar experiments