Experiment set1S82 for Azospirillum sp. SherDot2

Compare to:

NL-CCM_agar

200 most detrimental genes:

  gene name fitness t score description  
MPMX19_02424 +1.1 4.3 hypothetical protein compare
MPMX19_04682 +1.1 1.9 hypothetical protein compare
MPMX19_02136 +1.0 2.4 Phage shock protein A compare
MPMX19_06197 +1.0 2.0 hypothetical protein compare
MPMX19_04081 +1.0 2.5 hypothetical protein compare
MPMX19_01964 +1.0 3.0 hypothetical protein compare
MPMX19_05624 +0.9 2.0 hypothetical protein compare
MPMX19_03694 +0.9 1.9 hypothetical protein compare
MPMX19_00725 +0.9 5.0 Transcriptional regulatory protein ros compare
MPMX19_05581 +0.8 2.1 hypothetical protein compare
MPMX19_00212 +0.8 6.5 Nitrogen fixation regulation protein FixK compare
MPMX19_06456 +0.8 2.0 hypothetical protein compare
MPMX19_06297 +0.8 1.8 hypothetical protein compare
MPMX19_01012 +0.8 3.0 Cyclic pyranopterin monophosphate synthase compare
MPMX19_03728 +0.7 2.1 hypothetical protein compare
MPMX19_03631 +0.7 1.4 hypothetical protein compare
MPMX19_00890 +0.7 2.8 hypothetical protein compare
MPMX19_04726 +0.7 2.9 Glycine betaine/choline transport system permease protein OusW compare
MPMX19_00206 +0.7 5.5 Cytochrome c oxidase subunit 1, bacteroid compare
MPMX19_02039 +0.7 3.4 hypothetical protein compare
MPMX19_03123 +0.7 1.4 Citrate lyase acyl carrier protein compare
MPMX19_03342 +0.7 2.3 hypothetical protein compare
MPMX19_01864 +0.7 2.0 Regulatory protein AtoC compare
MPMX19_06180 +0.7 1.8 Sensor histidine kinase RegB compare
MPMX19_00209 +0.7 4.4 Cbb3-type cytochrome c oxidase subunit FixP compare
MPMX19_04551 +0.7 1.2 HTH-type transcriptional repressor RspR compare
MPMX19_01617 +0.7 1.5 hypothetical protein compare
MPMX19_00414 +0.7 1.5 Pyruvate dehydrogenase complex repressor compare
MPMX19_03800 +0.7 1.8 hypothetical protein compare
MPMX19_02664 +0.7 1.3 Arabinose 5-phosphate isomerase KdsD compare
MPMX19_00718 +0.7 2.0 hypothetical protein compare
MPMX19_04408 +0.7 1.6 tRNA1(Val) (adenine(37)-N6)-methyltransferase compare
MPMX19_00211 +0.6 2.6 putative copper-importing P-type ATPase A compare
MPMX19_04986 +0.6 2.7 hypothetical protein compare
MPMX19_01840 +0.6 4.2 Nif-specific regulatory protein compare
MPMX19_05726 +0.6 1.4 hypothetical protein compare
MPMX19_01614 +0.6 2.2 hypothetical protein compare
MPMX19_06878 +0.6 1.8 Putative amino-acid ABC transporter-binding protein YhdW compare
MPMX19_03897 +0.6 2.0 hypothetical protein compare
MPMX19_06874 +0.6 1.3 hypothetical protein compare
MPMX19_03083 +0.6 2.0 hypothetical protein compare
MPMX19_00543 +0.6 1.8 Molybdenum cofactor guanylyltransferase compare
MPMX19_05748 +0.6 1.5 Response regulator SaeR compare
MPMX19_04262 +0.6 3.1 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_04271 +0.6 2.0 Response regulator rcp1 compare
MPMX19_05551 +0.6 1.3 Chemotaxis protein CheY compare
MPMX19_03874 +0.6 2.3 hypothetical protein compare
MPMX19_05143 +0.6 0.9 hypothetical protein compare
MPMX19_04579 +0.6 2.4 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX19_03085 +0.6 1.2 Hydrogen peroxide-inducible genes activator compare
MPMX19_01875 +0.6 2.3 hypothetical protein compare
MPMX19_03741 +0.6 1.8 hypothetical protein compare
MPMX19_00878 +0.6 2.4 Guanidinium exporter compare
MPMX19_04246 +0.6 2.1 hypothetical protein compare
MPMX19_02937 +0.6 1.2 hypothetical protein compare
MPMX19_00208 +0.6 1.4 hypothetical protein compare
MPMX19_02041 +0.5 1.8 Protein YciI compare
MPMX19_03934 +0.5 1.7 hypothetical protein compare
MPMX19_01766 +0.5 3.0 Phosphate-specific transport system accessory protein PhoU compare
MPMX19_06770 +0.5 2.8 NAD-dependent glycerol dehydrogenase compare
MPMX19_05034 +0.5 1.7 ATP synthase subunit c compare
MPMX19_01394 +0.5 1.2 hypothetical protein compare
MPMX19_00207 +0.5 2.8 hypothetical protein compare
MPMX19_06752 +0.5 2.2 hypothetical protein compare
MPMX19_01059 +0.5 1.1 hypothetical protein compare
MPMX19_03509 +0.5 2.3 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic compare
MPMX19_01045 +0.5 4.6 hypothetical protein compare
MPMX19_03169 +0.5 1.4 Dihydroanticapsin 7-dehydrogenase compare
MPMX19_03757 +0.5 1.4 D-ribose pyranase compare
MPMX19_06677 +0.5 1.8 hypothetical protein compare
MPMX19_06235 +0.5 2.0 Glycine cleavage system transcriptional activator compare
MPMX19_06967 +0.5 0.8 hypothetical protein compare
MPMX19_02538 +0.5 1.0 hypothetical protein compare
MPMX19_01261 +0.5 3.9 Regulator of RpoS compare
MPMX19_05205 +0.5 2.0 hypothetical protein compare
MPMX19_04638 +0.5 1.3 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_01811 +0.5 1.2 hypothetical protein compare
MPMX19_05622 +0.5 4.0 Sensor histidine kinase RegB compare
MPMX19_03868 +0.5 2.1 Xylitol-binding protein compare
MPMX19_05231 +0.5 2.7 1,2-epoxyphenylacetyl-CoA isomerase compare
MPMX19_04557 +0.5 2.7 Na(+)/H(+) antiporter NhaA compare
MPMX19_06313 +0.5 2.2 hypothetical protein compare
MPMX19_06979 +0.5 1.8 hypothetical protein compare
MPMX19_03846 +0.5 1.5 hypothetical protein compare
MPMX19_04085 +0.5 1.8 hypothetical protein compare
MPMX19_01701 +0.5 3.6 hypothetical protein compare
MPMX19_04518 +0.5 2.5 Acetyl-CoA:oxalate CoA-transferase compare
MPMX19_00166 +0.5 1.2 hypothetical protein compare
MPMX19_06539 +0.5 1.2 hypothetical protein compare
MPMX19_05193 +0.5 0.8 Taurine-binding periplasmic protein compare
MPMX19_03308 +0.5 1.9 hypothetical protein compare
MPMX19_05745 +0.5 3.9 Sensor histidine kinase RcsC compare
MPMX19_06526 +0.5 2.3 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_02811 +0.5 2.0 Long-chain-alcohol dehydrogenase 1 compare
MPMX19_00186 +0.5 1.1 hypothetical protein compare
MPMX19_01247 +0.5 1.5 Transcriptional regulatory protein DegU compare
MPMX19_05096 +0.5 2.0 L-cystine import ATP-binding protein TcyC compare
MPMX19_00066 +0.5 1.2 hypothetical protein compare
MPMX19_01438 +0.5 2.8 hypothetical protein compare
MPMX19_05798 +0.5 1.2 HTH-type transcriptional repressor NanR compare
MPMX19_06084 +0.5 2.1 Transcriptional regulatory protein LnrK compare
MPMX19_00956 +0.5 1.9 hypothetical protein compare
MPMX19_03667 +0.5 1.9 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_02251 +0.5 1.1 hypothetical protein compare
MPMX19_02987 +0.5 0.9 hypothetical protein compare
MPMX19_02063 +0.5 2.2 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_04781 +0.5 2.1 hypothetical protein compare
MPMX19_06195 +0.5 1.5 hypothetical protein compare
MPMX19_06853 +0.5 1.8 Glyoxylate/hydroxypyruvate reductase A compare
MPMX19_04668 +0.5 1.4 HTH-type transcriptional regulator DmlR compare
MPMX19_06776 +0.5 2.1 hypothetical protein compare
MPMX19_02382 +0.5 2.0 hypothetical protein compare
MPMX19_06471 +0.5 2.0 Glyoxylate/hydroxypyruvate reductase A compare
MPMX19_02348 +0.5 1.3 hypothetical protein compare
MPMX19_01446 +0.5 2.8 Secretory immunoglobulin A-binding protein EsiB compare
MPMX19_01128 +0.5 2.2 hypothetical protein compare
MPMX19_04477 +0.5 1.8 hypothetical protein compare
MPMX19_01958 +0.5 3.5 Protein-glutamate methylesterase/protein-glutamine glutaminase compare
MPMX19_04286 +0.4 2.3 hypothetical protein compare
MPMX19_03504 +0.4 1.1 Sulfur carrier protein FdhD compare
MPMX19_03884 +0.4 2.1 hypothetical protein compare
MPMX19_05921 +0.4 1.1 hypothetical protein compare
MPMX19_00619 +0.4 1.9 Diacetyl reductase [(S)-acetoin forming] compare
MPMX19_04609 +0.4 2.0 Putative short-chain type dehydrogenase/reductase compare
MPMX19_04673 +0.4 1.5 Purine ribonucleoside efflux pump NepI compare
MPMX19_04540 +0.4 2.8 hypothetical protein compare
MPMX19_06121 +0.4 2.3 hypothetical protein compare
MPMX19_03368 +0.4 2.6 hypothetical protein compare
MPMX19_02094 +0.4 1.8 hypothetical protein compare
MPMX19_03092 +0.4 2.0 High-affinity zinc uptake system membrane protein ZnuB compare
MPMX19_02819 +0.4 1.7 hypothetical protein compare
MPMX19_03465 +0.4 1.9 Acetyl-CoA acetyltransferase compare
MPMX19_04145 +0.4 1.1 hypothetical protein compare
MPMX19_04620 +0.4 1.9 HTH-type transcriptional regulator CynR compare
MPMX19_04669 +0.4 1.4 Glucose 1-dehydrogenase compare
MPMX19_02778 +0.4 1.5 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_06381 +0.4 1.0 putative manganese efflux pump MntP compare
MPMX19_01719 +0.4 1.0 Putative fluoride ion transporter CrcB compare
MPMX19_03095 +0.4 0.8 hypothetical protein compare
MPMX19_03305 +0.4 1.4 L-fucose mutarotase compare
MPMX19_03816 +0.4 0.8 hypothetical protein compare
MPMX19_05850 +0.4 0.9 hypothetical protein compare
MPMX19_05014 +0.4 1.2 Cytochrome c1 compare
MPMX19_04099 +0.4 1.7 Chemotaxis protein CheY compare
MPMX19_04066 +0.4 2.8 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA compare
MPMX19_03831 +0.4 2.0 Sulfate/thiosulfate import ATP-binding protein CysA compare
MPMX19_06888 +0.4 1.6 hypothetical protein compare
MPMX19_06518 +0.4 1.7 Methionine import system permease protein MetP compare
MPMX19_04633 +0.4 1.7 hypothetical protein compare
MPMX19_06478 +0.4 2.0 hypothetical protein compare
MPMX19_06490 +0.4 0.9 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_06137 +0.4 1.2 hypothetical protein compare
MPMX19_04393 +0.4 1.3 hypothetical protein compare
MPMX19_06917 +0.4 1.4 HTH-type transcriptional regulator PgrR compare
MPMX19_05996 +0.4 1.6 Dodecaprenyl-phosphate galacturonate synthase compare
MPMX19_06144 +0.4 1.4 hypothetical protein compare
MPMX19_04788 +0.4 2.6 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_04644 +0.4 0.9 hypothetical protein compare
MPMX19_01351 +0.4 1.7 hypothetical protein compare
MPMX19_06207 +0.4 1.6 hypothetical protein compare
MPMX19_05011 +0.4 2.0 tRNA (cytidine(34)-2'-O)-methyltransferase compare
MPMX19_04509 +0.4 1.4 Spermidine/putrescine import ATP-binding protein PotA compare
MPMX19_00239 +0.4 2.7 putative adenylyltransferase/sulfurtransferase MoeZ compare
MPMX19_03574 +0.4 1.9 Aurachin B dehydrogenase compare
MPMX19_00020 +0.4 0.8 hypothetical protein compare
MPMX19_03870 +0.4 0.7 L-aspartate dehydrogenase compare
MPMX19_04990 +0.4 1.0 Hydrogen peroxide-inducible genes activator compare
MPMX19_02660 +0.4 1.5 Inner membrane protein YbjJ compare
MPMX19_04492 +0.4 1.3 hypothetical protein compare
MPMX19_06498 +0.4 1.4 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_03710 +0.4 1.7 Glycine cleavage system transcriptional activator compare
MPMX19_05906 +0.4 0.7 hypothetical protein compare
MPMX19_06646 +0.4 1.8 hypothetical protein compare
MPMX19_06989 +0.4 1.0 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_06042 +0.4 2.1 hypothetical protein compare
MPMX19_05718 +0.4 2.4 hypothetical protein compare
MPMX19_03819 +0.4 1.4 NADP-reducing hydrogenase subunit HndA compare
MPMX19_02783 +0.4 2.6 HTH-type transcriptional regulator DmlR compare
MPMX19_06702 +0.4 2.2 Cadmium-transporting ATPase compare
MPMX19_04316 +0.4 1.5 hypothetical protein compare
MPMX19_06795 +0.4 1.1 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase compare
MPMX19_04056 +0.4 2.4 Aldehyde oxidoreductase molybdenum-binding subunit PaoC compare
MPMX19_04332 +0.4 1.8 hypothetical protein compare
MPMX19_04244 +0.4 1.8 hypothetical protein compare
MPMX19_01956 +0.4 1.3 hypothetical protein compare
MPMX19_00747 +0.4 1.3 Organic hydroperoxide resistance protein OhrB compare
MPMX19_02034 +0.4 1.5 Peptidoglycan-associated lipoprotein compare
MPMX19_04570 +0.4 1.8 ECF RNA polymerase sigma factor SigF compare
MPMX19_03731 +0.4 1.5 hypothetical protein compare
MPMX19_01460 +0.4 1.7 hypothetical protein compare
MPMX19_00957 +0.4 1.8 Phosphoribosyl-ATP pyrophosphatase compare
MPMX19_03068 +0.4 2.0 hypothetical protein compare
MPMX19_06473 +0.4 2.2 Putative aliphatic sulfonates-binding protein compare
MPMX19_00297 +0.4 0.8 4-carboxy-4-hydroxy-2-oxoadipate aldolase compare
MPMX19_06514 +0.4 2.4 L-methionine gamma-lyase compare
MPMX19_00077 +0.4 2.4 Ribosomal large subunit pseudouridine synthase E compare
MPMX19_04125 +0.4 1.7 hypothetical protein compare
MPMX19_00204 +0.4 1.2 hypothetical protein compare
MPMX19_05186 +0.4 1.9 Thiosulfate sulfurtransferase GlpE compare
MPMX19_02313 +0.4 2.4 Oxygen-independent coproporphyrinogen III oxidase compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm_agar experiments