Experiment set1S81 for Azospirillum sp. SherDot2

Compare to:

NL-CCM_agar

200 most important genes:

  gene name fitness t score description  
MPMX19_03906 -3.6 -18.8 Pca regulon regulatory protein compare
MPMX19_01053 -2.7 -5.7 Dihydroorotase compare
MPMX19_01054 -2.4 -7.0 Aspartate carbamoyltransferase compare
MPMX19_04208 -2.2 -5.0 flagellum biosynthesis repressor protein FlbT compare
MPMX19_01560 -2.1 -3.4 3'-5' exonuclease DinG compare
MPMX19_00126 -2.0 -4.2 hypothetical protein compare
MPMX19_00705 -2.0 -3.8 Cell division coordinator CpoB compare
MPMX19_00530 -1.9 -4.5 Orotate phosphoribosyltransferase compare
MPMX19_02981 -1.9 -6.3 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_05387 -1.9 -2.6 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
MPMX19_01884 -1.9 -4.1 Phosphoribosylformylglycinamidine synthase subunit PurQ compare
MPMX19_01111 -1.9 -3.4 Sensory histidine kinase/phosphatase NtrB compare
MPMX19_01243 -1.8 -2.7 hypothetical protein compare
MPMX19_04948 -1.8 -2.9 HTH-type transcriptional regulator GltR compare
MPMX19_01883 -1.8 -7.5 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_04000 -1.8 -5.1 Flagellar motor switch protein FliG compare
MPMX19_01714 -1.7 -2.3 tRNA-modifying protein YgfZ compare
MPMX19_02657 -1.7 -14.4 Glutamate synthase [NADPH] large chain compare
MPMX19_02658 -1.7 -11.7 Glutamate synthase [NADPH] small chain compare
MPMX19_01630 -1.7 -4.9 Phosphoribosylamine--glycine ligase compare
MPMX19_06275 -1.7 -10.5 Argininosuccinate lyase compare
MPMX19_02207 -1.7 -3.8 N-(5'-phosphoribosyl)anthranilate isomerase compare
MPMX19_02303 -1.6 -3.3 hypothetical protein compare
MPMX19_04276 -1.6 -3.4 hypothetical protein compare
MPMX19_02268 -1.6 -4.0 hypothetical protein compare
MPMX19_01304 -1.6 -9.3 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX19_05727 -1.5 -7.0 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX19_00858 -1.5 -5.5 Flagellar biosynthetic protein FliP compare
MPMX19_00838 -1.5 -3.3 GTP pyrophosphokinase rsh compare
MPMX19_06277 -1.5 -9.2 hypothetical protein compare
MPMX19_02267 -1.5 -1.9 hypothetical protein compare
MPMX19_04898 -1.4 -3.7 Transcriptional regulatory protein LnrK compare
MPMX19_00862 -1.4 -8.1 hypothetical protein compare
MPMX19_01545 -1.4 -1.7 Lon protease compare
MPMX19_01395 -1.3 -2.2 hypothetical protein compare
MPMX19_04204 -1.3 -7.3 D-alanine--D-alanyl carrier protein ligase compare
MPMX19_00128 -1.3 -8.1 hypothetical protein compare
MPMX19_00906 -1.3 -9.1 Amidophosphoribosyltransferase compare
MPMX19_01486 -1.2 -6.8 Flagellar L-ring protein compare
MPMX19_02241 -1.2 -3.0 hypothetical protein compare
MPMX19_04093 -1.2 -3.7 hypothetical protein compare
MPMX19_01084 -1.2 -4.4 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX19_02675 -1.2 -9.2 Phosphoenolpyruvate-dependent phosphotransferase system compare
MPMX19_02980 -1.2 -2.2 Hydrogen cyanide synthase subunit HcnA compare
MPMX19_00304 -1.1 -2.8 Phosphatidylcholine synthase compare
MPMX19_04218 -1.1 -5.1 Protein phosphatase PrpC compare
MPMX19_01349 -1.1 -7.0 hypothetical protein compare
MPMX19_00478 -1.1 -2.2 putative protein RP812 compare
MPMX19_06546 -1.1 -2.7 hypothetical protein compare
MPMX19_04092 -1.1 -5.5 Flagellar motor switch protein FliN compare
MPMX19_04206 -1.1 -4.2 3-oxoacyl-[acyl-carrier-protein] synthase 3 compare
MPMX19_01494 -1.1 -6.4 Flagellar P-ring protein compare
MPMX19_03976 -1.1 -4.5 hypothetical protein compare
MPMX19_00867 -1.1 -8.8 Flagellar biosynthetic protein FlhB compare
MPMX19_04094 -1.1 -7.2 Flagellar M-ring protein compare
MPMX19_05445 -1.1 -3.0 tRNA-Glu compare
MPMX19_00714 -1.1 -5.7 Ferrous-iron efflux pump FieF compare
MPMX19_02460 -1.1 -9.3 Motility protein A compare
MPMX19_05679 -1.1 -6.6 Flagellum-specific ATP synthase compare
MPMX19_01481 -1.1 -8.0 Flagellar motor switch protein FliM compare
MPMX19_02668 -1.1 -6.6 RNA polymerase sigma-54 factor 2 compare
MPMX19_04207 -1.0 -3.3 hypothetical protein compare
MPMX19_06276 -1.0 -4.9 hypothetical protein compare
MPMX19_04623 -1.0 -4.4 hypothetical protein compare
MPMX19_00864 -1.0 -3.5 Flagellar hook-basal body complex protein FliE compare
MPMX19_05680 -1.0 -3.4 Cell cycle response regulator CtrA compare
MPMX19_00694 -1.0 -2.0 2',3'-cyclic-nucleotide 2'-phosphodiesterase compare
MPMX19_02674 -1.0 -1.6 NADH:quinone reductase compare
MPMX19_00912 -1.0 -7.0 Bifunctional uridylyltransferase/uridylyl-removing enzyme compare
MPMX19_01936 -1.0 -7.7 hypothetical protein compare
MPMX19_04090 -1.0 -6.8 Anaerobic nitric oxide reductase transcription regulator NorR compare
MPMX19_01708 -1.0 -2.6 hypothetical protein compare
MPMX19_04354 -1.0 -2.3 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_05119 -1.0 -7.3 Glucose-6-phosphate 1-dehydrogenase compare
MPMX19_00866 -1.0 -5.7 Flagellar biosynthetic protein FliR compare
MPMX19_01937 -1.0 -6.6 hypothetical protein compare
MPMX19_05714 -1.0 -5.9 hypothetical protein compare
MPMX19_02979 -1.0 -3.2 Hydrogen cyanide synthase subunit HcnB compare
MPMX19_01484 -0.9 -3.7 Flagellar basal-body rod protein FlgG compare
MPMX19_04963 -0.9 -1.9 Cysteine desulfurase IscS compare
MPMX19_04087 -0.9 -2.9 Flagellum site-determining protein YlxH compare
MPMX19_01076 -0.9 -1.8 Molybdopterin synthase catalytic subunit compare
MPMX19_05217 -0.9 -1.9 Flagellin compare
MPMX19_00854 -0.9 -8.1 hypothetical protein compare
MPMX19_04325 -0.9 -4.2 hypothetical protein compare
MPMX19_01497 -0.9 -3.3 hypothetical protein compare
MPMX19_05044 -0.9 -1.9 hypothetical protein compare
MPMX19_03609 -0.9 -2.2 HTH-type transcriptional repressor NagR compare
MPMX19_01014 -0.9 -3.1 Indole-3-glycerol phosphate synthase compare
MPMX19_01485 -0.9 -6.3 hypothetical protein compare
MPMX19_04200 -0.9 -4.7 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase compare
MPMX19_06581 -0.9 -5.8 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 2 compare
MPMX19_04089 -0.9 -7.2 Flagellar biosynthesis protein FlhA compare
MPMX19_04115 -0.9 -1.8 Sensor histidine kinase RcsC compare
MPMX19_01493 -0.9 -2.5 Flagellar assembly protein FliX compare
MPMX19_02235 -0.9 -2.6 tRNA-Ala compare
MPMX19_03281 -0.9 -2.6 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_04622 -0.9 -5.1 hypothetical protein compare
MPMX19_01479 -0.9 -3.8 hypothetical protein compare
MPMX19_00868 -0.9 -7.7 Sensor kinase CckA compare
MPMX19_00260 -0.9 -1.4 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_05678 -0.9 -4.4 hypothetical protein compare
MPMX19_04205 -0.9 -2.5 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_04223 -0.9 -6.9 hypothetical protein compare
MPMX19_00311 -0.9 -7.5 hypothetical protein compare
MPMX19_00748 -0.9 -2.1 Organic hydroperoxide resistance transcriptional regulator compare
MPMX19_06448 -0.9 -3.7 hypothetical protein compare
MPMX19_01822 -0.9 -4.3 2-isopropylmalate synthase compare
MPMX19_02195 -0.9 -4.3 Recombination protein RecR compare
MPMX19_00863 -0.9 -5.1 Flagellar basal-body rod protein FlgC compare
MPMX19_00794 -0.8 -2.7 Transcriptional activator protein CopR compare
MPMX19_04222 -0.8 -6.8 hypothetical protein compare
MPMX19_01495 -0.8 -1.4 hypothetical protein compare
MPMX19_06969 -0.8 -2.2 hypothetical protein compare
MPMX19_04091 -0.8 -6.1 Chemotaxis protein PomA compare
MPMX19_04681 -0.8 -2.0 5-hydroxyisourate hydrolase compare
MPMX19_02223 -0.8 -6.3 Ammonia channel compare
MPMX19_01480 -0.8 -3.5 hypothetical protein compare
MPMX19_01483 -0.8 -5.6 Flagellar basal-body rod protein FlgG compare
MPMX19_04638 -0.8 -1.1 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_06337 -0.8 -2.5 Arsenic resistance transcriptional regulator ArsR1 compare
MPMX19_06102 -0.8 -2.3 Membrane-bound lytic murein transglycosylase C compare
MPMX19_04258 -0.8 -3.2 hypothetical protein compare
MPMX19_03069 -0.8 -1.1 hypothetical protein compare
MPMX19_01015 -0.8 -3.4 Anthranilate phosphoribosyltransferase compare
MPMX19_04212 -0.8 -6.1 Photosystem I assembly protein Ycf3 compare
MPMX19_02300 -0.8 -2.0 Transcription elongation factor GreA compare
MPMX19_04624 -0.8 -4.9 hypothetical protein compare
MPMX19_05065 -0.8 -1.8 Farnesyl diphosphate synthase compare
MPMX19_06934 -0.8 -2.4 Manganese transport system membrane protein MntB compare
MPMX19_06734 -0.8 -6.8 Alginate biosynthesis protein AlgA compare
MPMX19_06099 -0.8 -5.5 hypothetical protein compare
MPMX19_03752 -0.8 -1.7 hypothetical protein compare
MPMX19_05361 -0.8 -3.9 CRP-like cAMP-activated global transcriptional regulator compare
MPMX19_00297 -0.8 -0.7 4-carboxy-4-hydroxy-2-oxoadipate aldolase compare
MPMX19_02737 -0.8 -3.8 Tryptophan synthase alpha chain compare
MPMX19_01297 -0.8 -1.6 hypothetical protein compare
MPMX19_03734 -0.8 -1.6 RutC family protein YjgH compare
MPMX19_04198 -0.8 -5.9 hypothetical protein compare
MPMX19_05798 -0.7 -1.4 HTH-type transcriptional repressor NanR compare
MPMX19_02742 -0.7 -1.2 hypothetical protein compare
MPMX19_06577 -0.7 -5.4 hypothetical protein compare
MPMX19_05835 -0.7 -3.4 Alkyl hydroperoxide reductase C compare
MPMX19_00031 -0.7 -2.3 hypothetical protein compare
MPMX19_03929 -0.7 -2.8 hypothetical protein compare
MPMX19_00976 -0.7 -1.6 ATP-dependent RNA helicase RhlE compare
MPMX19_03871 -0.7 -1.4 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_02531 -0.7 -1.5 hypothetical protein compare
MPMX19_04224 -0.7 -6.5 hypothetical protein compare
MPMX19_02516 -0.7 -2.9 hypothetical protein compare
MPMX19_00696 -0.7 -2.9 Crossover junction endodeoxyribonuclease RuvC compare
MPMX19_05357 -0.7 -5.7 hypothetical protein compare
MPMX19_01597 -0.7 -1.7 23S rRNA (uridine(2479)-2'-O)-methyltransferase compare
MPMX19_02736 -0.7 -5.0 Tryptophan synthase beta chain compare
MPMX19_05690 -0.7 -4.3 Protein phosphotransferase ChpT compare
MPMX19_06579 -0.7 -1.9 Carnitine monooxygenase oxygenase subunit compare
MPMX19_05143 -0.7 -1.5 hypothetical protein compare
MPMX19_01394 -0.7 -1.3 hypothetical protein compare
MPMX19_02553 -0.7 -3.3 Protein-export protein SecB compare
MPMX19_04199 -0.7 -4.5 Pseudaminic acid synthase compare
MPMX19_06545 -0.7 -5.9 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase compare
MPMX19_02803 -0.7 -2.1 putative FAD-linked oxidoreductase compare
MPMX19_06926 -0.7 -2.0 hypothetical protein compare
MPMX19_00262 -0.7 -1.4 Thiazole synthase compare
MPMX19_06800 -0.7 -2.7 Homoprotocatechuate catabolism bifunctional isomerase/decarboxylase compare
MPMX19_03141 -0.7 -1.8 hypothetical protein compare
MPMX19_03859 -0.7 -1.9 hypothetical protein compare
MPMX19_03973 -0.7 -4.1 Esterase YbfF compare
MPMX19_00904 -0.7 -4.2 DNA repair protein RadA compare
MPMX19_06892 -0.7 -1.7 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_06967 -0.7 -1.3 hypothetical protein compare
MPMX19_00860 -0.7 -1.5 hypothetical protein compare
MPMX19_06582 -0.7 -5.5 hypothetical protein compare
MPMX19_00996 -0.7 -2.5 Metalloprotease MmpA compare
MPMX19_05505 -0.7 -1.4 Leucine-responsive regulatory protein compare
MPMX19_06904 -0.7 -2.3 putative tautomerase compare
MPMX19_04088 -0.7 -2.3 Signal recognition particle 54 kDa protein compare
MPMX19_02234 -0.7 -2.7 hypothetical protein compare
MPMX19_02218 -0.7 -1.2 hypothetical protein compare
MPMX19_06585 -0.7 -5.9 hypothetical protein compare
MPMX19_03612 -0.7 -2.4 hypothetical protein compare
MPMX19_00635 -0.7 -4.5 5,10-methylenetetrahydrofolate reductase compare
MPMX19_00851 -0.7 -4.1 hypothetical protein compare
MPMX19_06034 -0.6 -2.9 Phosphate transport system permease protein PstA compare
MPMX19_03226 -0.6 -1.6 hypothetical protein compare
MPMX19_01125 -0.6 -0.8 hypothetical protein compare
MPMX19_06544 -0.6 -5.0 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) compare
MPMX19_01321 -0.6 -2.4 tRNA-Cys compare
MPMX19_03599 -0.6 -3.0 2-amino-5-chloromuconic acid deaminase compare
MPMX19_05430 -0.6 -1.1 HTH-type transcriptional regulator DmlR compare
MPMX19_01796 -0.6 -0.8 hypothetical protein compare
MPMX19_06547 -0.6 -3.5 hypothetical protein compare
MPMX19_06973 -0.6 -2.8 2-methylfumaryl-CoA isomerase compare
MPMX19_05831 -0.6 -1.7 Protein/nucleic acid deglycase 2 compare
MPMX19_02137 -0.6 -2.7 hypothetical protein compare
MPMX19_04869 -0.6 -2.6 DNA polymerase I compare
MPMX19_03369 -0.6 -1.1 hypothetical protein compare
MPMX19_06382 -0.6 -2.2 putative MFS-type transporter YfcJ compare
MPMX19_03035 -0.6 -2.1 Protein YceI compare
MPMX19_04443 -0.6 -2.2 5-hydroxyisourate hydrolase compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm_agar experiments