Experiment set1S81 for Azospirillum sp. SherDot2

Compare to:

NL-CCM_agar

200 most detrimental genes:

  gene name fitness t score description  
MPMX19_06197 +1.0 2.6 hypothetical protein compare
MPMX19_03095 +0.9 3.5 hypothetical protein compare
MPMX19_00208 +0.9 2.2 hypothetical protein compare
MPMX19_06519 +0.9 1.5 HTH-type transcriptional repressor NagR compare
MPMX19_01978 +0.9 2.7 hypothetical protein compare
MPMX19_05623 +0.9 4.5 Photosynthetic apparatus regulatory protein RegA compare
MPMX19_02424 +0.8 3.1 hypothetical protein compare
MPMX19_00725 +0.8 5.5 Transcriptional regulatory protein ros compare
MPMX19_00207 +0.8 4.6 hypothetical protein compare
MPMX19_06989 +0.8 2.0 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_03262 +0.8 3.0 putative HTH-type transcriptional repressor ExuR compare
MPMX19_00206 +0.8 6.0 Cytochrome c oxidase subunit 1, bacteroid compare
MPMX19_03549 +0.8 2.7 HTH-type transcriptional regulator PgrR compare
MPMX19_03096 +0.8 2.4 hypothetical protein compare
MPMX19_02039 +0.8 3.5 hypothetical protein compare
MPMX19_06569 +0.8 3.2 hypothetical protein compare
MPMX19_01067 +0.8 2.0 hypothetical protein compare
MPMX19_01875 +0.7 3.6 hypothetical protein compare
MPMX19_05016 +0.7 1.4 Sensor histidine kinase RcsC compare
MPMX19_04687 +0.7 1.5 Atrazine chlorohydrolase compare
MPMX19_01045 +0.7 6.1 hypothetical protein compare
MPMX19_06044 +0.7 1.6 hypothetical protein compare
MPMX19_06808 +0.7 2.2 HTH-type transcriptional regulator DmlR compare
MPMX19_02511 +0.7 2.0 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase compare
MPMX19_04161 +0.7 1.9 hypothetical protein compare
MPMX19_04726 +0.7 2.0 Glycine betaine/choline transport system permease protein OusW compare
MPMX19_00923 +0.7 2.6 hypothetical protein compare
MPMX19_02559 +0.7 2.4 7-methyl-GTP pyrophosphatase compare
MPMX19_03916 +0.6 2.1 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
MPMX19_05534 +0.6 2.0 DNA gyrase inhibitor YacG compare
MPMX19_00212 +0.6 5.4 Nitrogen fixation regulation protein FixK compare
MPMX19_04246 +0.6 2.5 hypothetical protein compare
MPMX19_01840 +0.6 4.0 Nif-specific regulatory protein compare
MPMX19_06297 +0.6 1.4 hypothetical protein compare
MPMX19_02466 +0.6 1.8 Octopine permease ATP-binding protein P compare
MPMX19_03816 +0.6 1.6 hypothetical protein compare
MPMX19_01073 +0.6 2.7 5'-nucleotidase compare
MPMX19_04492 +0.6 2.6 hypothetical protein compare
MPMX19_01261 +0.6 4.9 Regulator of RpoS compare
MPMX19_00414 +0.6 1.7 Pyruvate dehydrogenase complex repressor compare
MPMX19_02532 +0.6 1.9 Cytochrome c-type biogenesis protein CcmE compare
MPMX19_06768 +0.6 2.2 hypothetical protein compare
MPMX19_04633 +0.6 2.4 hypothetical protein compare
MPMX19_01059 +0.6 1.3 hypothetical protein compare
MPMX19_03948 +0.6 0.8 tRNA-Ser compare
MPMX19_06395 +0.6 1.8 Inner membrane protein YqaA compare
MPMX19_01755 +0.6 2.5 hypothetical protein compare
MPMX19_03462 +0.6 1.7 Acetate CoA-transferase subunit alpha compare
MPMX19_02733 +0.6 3.4 Regulatory protein LuxO compare
MPMX19_01701 +0.6 4.0 hypothetical protein compare
MPMX19_02492 +0.5 2.1 hypothetical protein compare
MPMX19_03972 +0.5 2.4 Enolase compare
MPMX19_01719 +0.5 1.8 Putative fluoride ion transporter CrcB compare
MPMX19_04120 +0.5 2.2 hypothetical protein compare
MPMX19_04743 +0.5 2.2 Formyltransferase/hydrolase complex subunit D compare
MPMX19_01766 +0.5 3.3 Phosphate-specific transport system accessory protein PhoU compare
MPMX19_06478 +0.5 2.9 hypothetical protein compare
MPMX19_06490 +0.5 1.5 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_05896 +0.5 1.9 hypothetical protein compare
MPMX19_02816 +0.5 1.5 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_01217 +0.5 2.1 Ribosomal RNA small subunit methyltransferase C compare
MPMX19_03109 +0.5 1.5 hypothetical protein compare
MPMX19_03710 +0.5 1.8 Glycine cleavage system transcriptional activator compare
MPMX19_04449 +0.5 1.1 Inosine-5'-monophosphate dehydrogenase compare
MPMX19_00094 +0.5 1.6 hypothetical protein compare
MPMX19_04635 +0.5 2.2 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_03100 +0.5 2.7 hypothetical protein compare
MPMX19_06979 +0.5 1.6 hypothetical protein compare
MPMX19_05195 +0.5 2.4 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_03126 +0.5 2.1 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase compare
MPMX19_04682 +0.5 1.3 hypothetical protein compare
MPMX19_00665 +0.5 1.9 hypothetical protein compare
MPMX19_00010 +0.5 2.8 Transcriptional regulatory protein OmpR compare
MPMX19_02251 +0.5 0.9 hypothetical protein compare
MPMX19_05306 +0.5 2.8 RCS-specific HTH-type transcriptional activator RclR compare
MPMX19_06042 +0.5 3.1 hypothetical protein compare
MPMX19_05282 +0.5 1.9 1,3,6,8-tetrahydroxynaphthalene synthase compare
MPMX19_05036 +0.5 3.0 hypothetical protein compare
MPMX19_03866 +0.5 1.1 Ribose import permease protein RbsC compare
MPMX19_05205 +0.5 2.2 hypothetical protein compare
MPMX19_03005 +0.5 1.4 Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha compare
MPMX19_03329 +0.5 1.9 hypothetical protein compare
MPMX19_05178 +0.5 2.4 Alkanesulfonate monooxygenase compare
MPMX19_05622 +0.5 3.8 Sensor histidine kinase RegB compare
MPMX19_05745 +0.5 3.7 Sensor histidine kinase RcsC compare
MPMX19_03123 +0.5 1.1 Citrate lyase acyl carrier protein compare
MPMX19_00244 +0.5 1.9 hypothetical protein compare
MPMX19_00263 +0.5 1.7 hypothetical protein compare
MPMX19_03340 +0.5 1.8 hypothetical protein compare
MPMX19_02865 +0.5 2.2 hypothetical protein compare
MPMX19_01421 +0.5 1.3 hypothetical protein compare
MPMX19_01749 +0.5 2.5 hypothetical protein compare
MPMX19_01864 +0.5 1.4 Regulatory protein AtoC compare
MPMX19_04579 +0.5 2.1 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX19_06917 +0.5 2.0 HTH-type transcriptional regulator PgrR compare
MPMX19_00112 +0.5 1.5 Multidrug transporter EmrE compare
MPMX19_01508 +0.5 2.1 hypothetical protein compare
MPMX19_03073 +0.5 1.7 hypothetical protein compare
MPMX19_05333 +0.5 1.4 Thymidine phosphorylase compare
MPMX19_00225 +0.5 2.6 hypothetical protein compare
MPMX19_06646 +0.5 2.2 hypothetical protein compare
MPMX19_05207 +0.5 1.2 Hemolysin secretion protein D, plasmid compare
MPMX19_00209 +0.5 2.9 Cbb3-type cytochrome c oxidase subunit FixP compare
MPMX19_04768 +0.5 2.7 Apulose-4-phosphate transketolase subunit A compare
MPMX19_02778 +0.5 1.7 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_06773 +0.5 1.3 2-(R)-hydroxypropyl-CoM dehydrogenase compare
MPMX19_05127 +0.5 2.0 hypothetical protein compare
MPMX19_05022 +0.4 2.5 hypothetical protein compare
MPMX19_06207 +0.4 1.9 hypothetical protein compare
MPMX19_06770 +0.4 2.2 NAD-dependent glycerol dehydrogenase compare
MPMX19_00957 +0.4 2.4 Phosphoribosyl-ATP pyrophosphatase compare
MPMX19_01392 +0.4 3.7 hypothetical protein compare
MPMX19_06180 +0.4 1.4 Sensor histidine kinase RegB compare
MPMX19_04560 +0.4 1.2 hypothetical protein compare
MPMX19_06866 +0.4 1.9 HTH-type transcriptional regulator NimR compare
MPMX19_06661 +0.4 2.4 hypothetical protein compare
MPMX19_00114 +0.4 2.2 hypothetical protein compare
MPMX19_06326 +0.4 1.3 hypothetical protein compare
MPMX19_04863 +0.4 1.3 Transcriptional regulatory protein LnrK compare
MPMX19_05364 +0.4 2.1 Acetate CoA-transferase subunit beta compare
MPMX19_02084 +0.4 1.1 hypothetical protein compare
MPMX19_06223 +0.4 1.8 HTH-type transcriptional regulator GbpR compare
MPMX19_04336 +0.4 2.5 Cytochrome c2 compare
MPMX19_03072 +0.4 0.9 hypothetical protein compare
MPMX19_00577 +0.4 1.9 Ribosomal RNA small subunit methyltransferase E compare
MPMX19_01101 +0.4 1.2 hypothetical protein compare
MPMX19_05762 +0.4 1.4 hypothetical protein compare
MPMX19_05013 +0.4 2.1 Cytochrome b compare
MPMX19_05231 +0.4 2.0 1,2-epoxyphenylacetyl-CoA isomerase compare
MPMX19_03595 +0.4 2.8 C4-dicarboxylate transport protein 2 compare
MPMX19_04509 +0.4 1.5 Spermidine/putrescine import ATP-binding protein PotA compare
MPMX19_01523 +0.4 1.9 Polar-differentiation response regulator DivK compare
MPMX19_04569 +0.4 1.3 Anti-sigma-F factor NrsF compare
MPMX19_00619 +0.4 1.6 Diacetyl reductase [(S)-acetoin forming] compare
MPMX19_03578 +0.4 1.9 HTH-type transcriptional regulator PgrR compare
MPMX19_04477 +0.4 1.6 hypothetical protein compare
MPMX19_06907 +0.4 1.6 L-talarate/galactarate dehydratase compare
MPMX19_02787 +0.4 1.5 (R)-benzylsuccinyl-CoA dehydrogenase compare
MPMX19_00888 +0.4 2.4 Cytochrome c oxidase assembly protein CtaG compare
MPMX19_00875 +0.4 1.4 hypothetical protein compare
MPMX19_05850 +0.4 1.1 hypothetical protein compare
MPMX19_03476 +0.4 1.2 hypothetical protein compare
MPMX19_03666 +0.4 1.7 hypothetical protein compare
MPMX19_06198 +0.4 1.5 hypothetical protein compare
MPMX19_02827 +0.4 1.8 Dipeptide transport system permease protein DppC compare
MPMX19_05656 +0.4 1.1 HTH-type transcriptional activator RhaR compare
MPMX19_00543 +0.4 1.4 Molybdenum cofactor guanylyltransferase compare
MPMX19_03789 +0.4 1.9 hypothetical protein compare
MPMX19_05104 +0.4 1.2 hypothetical protein compare
MPMX19_01717 +0.4 1.8 Pyrophosphatase PpaX compare
MPMX19_03308 +0.4 1.3 hypothetical protein compare
MPMX19_04662 +0.4 2.4 High-affinity branched-chain amino acid transport system permease protein LivH compare
MPMX19_06777 +0.4 1.2 hypothetical protein compare
MPMX19_00142 +0.4 0.6 hypothetical protein compare
MPMX19_03694 +0.4 0.7 hypothetical protein compare
MPMX19_06476 +0.4 2.2 HTH-type transcriptional regulator ArgP compare
MPMX19_05060 +0.4 2.1 hypothetical protein compare
MPMX19_06322 +0.4 1.4 hypothetical protein compare
MPMX19_02136 +0.4 0.5 Phage shock protein A compare
MPMX19_06351 +0.4 0.7 Arsenate reductase compare
MPMX19_05193 +0.4 1.0 Taurine-binding periplasmic protein compare
MPMX19_05254 +0.4 0.8 Carbon monoxide dehydrogenase small chain compare
MPMX19_04278 +0.4 2.4 Threonine efflux protein compare
MPMX19_03575 +0.4 1.4 HTH-type transcriptional regulator NimR compare
MPMX19_02714 +0.4 1.3 hypothetical protein compare
MPMX19_03900 +0.4 1.7 Hca operon transcriptional activator HcaR compare
MPMX19_06812 +0.4 1.9 hypothetical protein compare
MPMX19_01831 +0.4 1.2 hypothetical protein compare
MPMX19_00900 +0.4 3.2 hypothetical protein compare
MPMX19_01617 +0.4 0.8 hypothetical protein compare
MPMX19_04549 +0.4 1.7 L-cystine-binding protein FliY compare
MPMX19_01460 +0.4 1.6 hypothetical protein compare
MPMX19_00170 +0.4 0.8 hypothetical protein compare
MPMX19_06235 +0.4 1.1 Glycine cleavage system transcriptional activator compare
MPMX19_03629 +0.4 1.9 hypothetical protein compare
MPMX19_03823 +0.4 1.5 hypothetical protein compare
MPMX19_03707 +0.4 1.1 L-cystine import ATP-binding protein TcyC compare
MPMX19_06864 +0.3 1.5 hypothetical protein compare
MPMX19_05215 +0.3 1.1 hypothetical protein compare
MPMX19_04521 +0.3 1.5 Bifunctional protein PaaZ compare
MPMX19_00680 +0.3 1.0 Elongation factor P--(R)-beta-lysine ligase compare
MPMX19_06923 +0.3 1.4 hypothetical protein compare
MPMX19_06193 +0.3 0.8 Flagellar hook-basal body complex protein FliE compare
MPMX19_06520 +0.3 1.1 Nitrate import ATP-binding protein NrtC compare
MPMX19_02500 +0.3 2.2 Endonuclease III compare
MPMX19_06353 +0.3 0.6 hypothetical protein compare
MPMX19_04647 +0.3 1.3 hypothetical protein compare
MPMX19_01689 +0.3 2.1 hypothetical protein compare
MPMX19_04889 +0.3 2.0 Chromosome partition protein Smc compare
MPMX19_01993 +0.3 1.8 Bacterioferritin compare
MPMX19_06815 +0.3 1.3 hypothetical protein compare
MPMX19_01274 +0.3 1.8 hypothetical protein compare
MPMX19_03116 +0.3 1.1 Vitamin B12 import ATP-binding protein BtuD compare
MPMX19_05061 +0.3 1.9 hypothetical protein compare
MPMX19_04900 +0.3 2.8 putative 3-hydroxyacyl-CoA dehydrogenase compare
MPMX19_03014 +0.3 1.4 Transcriptional activatory protein AadR compare
MPMX19_03897 +0.3 1.3 hypothetical protein compare
MPMX19_03243 +0.3 2.1 hypothetical protein compare
MPMX19_05555 +0.3 1.6 Protein-glutamate methylesterase/protein-glutamine glutaminase compare
MPMX19_04711 +0.3 2.0 Formyltetrahydrofolate deformylase compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm_agar experiments