Experiment set1S80 for Azospirillum sp. SherDot2

Compare to:

NL-CCM_agar

200 most important genes:

  gene name fitness t score description  
MPMX19_02980 -4.9 -3.4 Hydrogen cyanide synthase subunit HcnA compare
MPMX19_03906 -3.8 -17.8 Pca regulon regulatory protein compare
MPMX19_00530 -3.0 -4.5 Orotate phosphoribosyltransferase compare
MPMX19_01495 -2.7 -3.0 hypothetical protein compare
MPMX19_06275 -2.3 -12.6 Argininosuccinate lyase compare
MPMX19_05438 -2.3 -4.2 hypothetical protein compare
MPMX19_06546 -2.2 -3.6 hypothetical protein compare
MPMX19_02981 -2.2 -6.8 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_05143 -2.2 -3.0 hypothetical protein compare
MPMX19_00705 -2.2 -3.3 Cell division coordinator CpoB compare
MPMX19_01883 -2.2 -8.4 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_00976 -2.1 -3.1 ATP-dependent RNA helicase RhlE compare
MPMX19_01884 -2.1 -4.1 Phosphoribosylformylglycinamidine synthase subunit PurQ compare
MPMX19_05680 -2.1 -5.2 Cell cycle response regulator CtrA compare
MPMX19_02657 -2.0 -16.1 Glutamate synthase [NADPH] large chain compare
MPMX19_04968 -2.0 -2.6 hypothetical protein compare
MPMX19_01304 -1.9 -10.8 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX19_00128 -1.9 -11.5 hypothetical protein compare
MPMX19_01054 -1.9 -6.3 Aspartate carbamoyltransferase compare
MPMX19_06277 -1.9 -10.8 hypothetical protein compare
MPMX19_01545 -1.9 -1.3 Lon protease compare
MPMX19_01015 -1.9 -5.8 Anthranilate phosphoribosyltransferase compare
MPMX19_02658 -1.9 -12.0 Glutamate synthase [NADPH] small chain compare
MPMX19_01630 -1.8 -4.9 Phosphoribosylamine--glycine ligase compare
MPMX19_00167 -1.8 -2.9 hypothetical protein compare
MPMX19_00841 -1.8 -2.6 Holo-[acyl-carrier-protein] synthase compare
MPMX19_00126 -1.7 -3.2 hypothetical protein compare
MPMX19_04087 -1.7 -4.2 Flagellum site-determining protein YlxH compare
MPMX19_06102 -1.7 -3.8 Membrane-bound lytic murein transglycosylase C compare
MPMX19_01053 -1.7 -4.3 Dihydroorotase compare
MPMX19_02303 -1.7 -3.2 hypothetical protein compare
MPMX19_00304 -1.7 -3.6 Phosphatidylcholine synthase compare
MPMX19_04258 -1.6 -4.6 hypothetical protein compare
MPMX19_02543 -1.6 -2.2 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX19_03724 -1.6 -2.5 hypothetical protein compare
MPMX19_01497 -1.5 -3.8 hypothetical protein compare
MPMX19_02675 -1.5 -11.4 Phosphoenolpyruvate-dependent phosphotransferase system compare
MPMX19_04093 -1.5 -3.3 hypothetical protein compare
MPMX19_02668 -1.5 -8.2 RNA polymerase sigma-54 factor 2 compare
MPMX19_05387 -1.5 -3.2 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
MPMX19_00675 -1.5 -3.2 Peptidoglycan-associated lipoprotein compare
MPMX19_00858 -1.5 -5.2 Flagellar biosynthetic protein FliP compare
MPMX19_01939 -1.5 -4.2 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
MPMX19_02511 -1.4 -2.1 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase compare
MPMX19_01111 -1.4 -3.4 Sensory histidine kinase/phosphatase NtrB compare
MPMX19_02202 -1.4 -2.8 hypothetical protein compare
MPMX19_01084 -1.4 -4.2 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX19_02268 -1.4 -3.5 hypothetical protein compare
MPMX19_04218 -1.4 -4.9 Protein phosphatase PrpC compare
MPMX19_00131 -1.4 -2.5 hypothetical protein compare
MPMX19_06547 -1.4 -5.7 hypothetical protein compare
MPMX19_04208 -1.4 -3.2 flagellum biosynthesis repressor protein FlbT compare
MPMX19_02267 -1.4 -1.8 hypothetical protein compare
MPMX19_05065 -1.4 -2.5 Farnesyl diphosphate synthase compare
MPMX19_00906 -1.3 -9.1 Amidophosphoribosyltransferase compare
MPMX19_06004 -1.3 -2.6 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_01365 -1.3 -2.1 hypothetical protein compare
MPMX19_04225 -1.3 -4.7 hypothetical protein compare
MPMX19_01494 -1.3 -7.3 Flagellar P-ring protein compare
MPMX19_00862 -1.3 -7.2 hypothetical protein compare
MPMX19_04092 -1.3 -6.0 Flagellar motor switch protein FliN compare
MPMX19_01560 -1.3 -2.0 3'-5' exonuclease DinG compare
MPMX19_05714 -1.3 -7.1 hypothetical protein compare
MPMX19_05044 -1.3 -2.1 hypothetical protein compare
MPMX19_01426 -1.3 -1.2 hypothetical protein compare
MPMX19_01483 -1.3 -8.4 Flagellar basal-body rod protein FlgG compare
MPMX19_03693 -1.3 -3.2 hypothetical protein compare
MPMX19_01479 -1.2 -5.1 hypothetical protein compare
MPMX19_04199 -1.2 -6.5 Pseudaminic acid synthase compare
MPMX19_02674 -1.2 -2.1 NADH:quinone reductase compare
MPMX19_06892 -1.2 -3.6 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_04204 -1.2 -6.4 D-alanine--D-alanyl carrier protein ligase compare
MPMX19_05119 -1.2 -8.4 Glucose-6-phosphate 1-dehydrogenase compare
MPMX19_04207 -1.2 -3.4 hypothetical protein compare
MPMX19_04000 -1.2 -3.8 Flagellar motor switch protein FliG compare
MPMX19_06490 -1.2 -2.0 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_01936 -1.2 -8.0 hypothetical protein compare
MPMX19_01777 -1.2 -1.9 2-aminoadipate transaminase compare
MPMX19_05727 -1.2 -5.7 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX19_05982 -1.2 -2.4 hypothetical protein compare
MPMX19_03635 -1.2 -1.4 DNA-binding transcriptional activator DecR compare
MPMX19_01714 -1.2 -1.8 tRNA-modifying protein YgfZ compare
MPMX19_03787 -1.2 -1.9 hypothetical protein compare
MPMX19_01493 -1.2 -3.0 Flagellar assembly protein FliX compare
MPMX19_01481 -1.1 -8.2 Flagellar motor switch protein FliM compare
MPMX19_05678 -1.1 -5.1 hypothetical protein compare
MPMX19_03976 -1.1 -3.6 hypothetical protein compare
MPMX19_00794 -1.1 -3.3 Transcriptional activator protein CopR compare
MPMX19_01486 -1.1 -6.1 Flagellar L-ring protein compare
MPMX19_04094 -1.1 -7.1 Flagellar M-ring protein compare
MPMX19_00863 -1.1 -5.8 Flagellar basal-body rod protein FlgC compare
MPMX19_01484 -1.1 -4.8 Flagellar basal-body rod protein FlgG compare
MPMX19_02460 -1.1 -9.0 Motility protein A compare
MPMX19_06577 -1.1 -7.2 hypothetical protein compare
MPMX19_04622 -1.1 -6.0 hypothetical protein compare
MPMX19_06580 -1.1 -4.2 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_05472 -1.1 -3.1 hypothetical protein compare
MPMX19_00748 -1.1 -3.1 Organic hydroperoxide resistance transcriptional regulator compare
MPMX19_03752 -1.1 -1.7 hypothetical protein compare
MPMX19_03335 -1.1 -2.2 hypothetical protein compare
MPMX19_01597 -1.1 -2.1 23S rRNA (uridine(2479)-2'-O)-methyltransferase compare
MPMX19_00854 -1.1 -9.0 hypothetical protein compare
MPMX19_04200 -1.0 -5.1 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase compare
MPMX19_04205 -1.0 -2.8 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_00866 -1.0 -5.5 Flagellar biosynthetic protein FliR compare
MPMX19_00867 -1.0 -8.4 Flagellar biosynthetic protein FlhB compare
MPMX19_05679 -1.0 -6.5 Flagellum-specific ATP synthase compare
MPMX19_04089 -1.0 -7.9 Flagellar biosynthesis protein FlhA compare
MPMX19_03646 -1.0 -4.3 Histidinol-phosphate aminotransferase compare
MPMX19_00904 -1.0 -5.9 DNA repair protein RadA compare
MPMX19_00912 -1.0 -6.9 Bifunctional uridylyltransferase/uridylyl-removing enzyme compare
MPMX19_02905 -1.0 -2.4 hypothetical protein compare
MPMX19_03276 -1.0 -2.1 hypothetical protein compare
MPMX19_04898 -1.0 -2.7 Transcriptional regulatory protein LnrK compare
MPMX19_04206 -1.0 -4.0 3-oxoacyl-[acyl-carrier-protein] synthase 3 compare
MPMX19_03529 -1.0 -3.7 2,3-diketo-L-gulonate-binding periplasmic protein YiaO compare
MPMX19_06581 -1.0 -6.6 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 2 compare
MPMX19_00311 -1.0 -8.4 hypothetical protein compare
MPMX19_00795 -1.0 -4.1 Adaptive-response sensory-kinase SasA compare
MPMX19_01937 -1.0 -6.1 hypothetical protein compare
MPMX19_06819 -1.0 -1.9 hypothetical protein compare
MPMX19_01349 -1.0 -5.1 hypothetical protein compare
MPMX19_01480 -0.9 -3.8 hypothetical protein compare
MPMX19_00665 -0.9 -2.5 hypothetical protein compare
MPMX19_06253 -0.9 -2.1 hypothetical protein compare
MPMX19_06545 -0.9 -7.8 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase compare
MPMX19_04222 -0.9 -7.2 hypothetical protein compare
MPMX19_03722 -0.9 -1.7 hypothetical protein compare
MPMX19_01485 -0.9 -6.3 hypothetical protein compare
MPMX19_01616 -0.9 -1.7 hypothetical protein compare
MPMX19_01796 -0.9 -1.1 hypothetical protein compare
MPMX19_01577 -0.9 -2.9 hypothetical protein compare
MPMX19_06644 -0.9 -7.6 GDP-mannose 4,6-dehydratase compare
MPMX19_05458 -0.9 -2.4 hypothetical protein compare
MPMX19_02737 -0.9 -4.0 Tryptophan synthase alpha chain compare
MPMX19_04391 -0.9 -5.0 Homoserine O-acetyltransferase compare
MPMX19_01201 -0.9 -2.2 hypothetical protein compare
MPMX19_02223 -0.9 -6.5 Ammonia channel compare
MPMX19_04323 -0.9 -2.3 Segregation and condensation protein B compare
MPMX19_00864 -0.9 -2.7 Flagellar hook-basal body complex protein FliE compare
MPMX19_00714 -0.9 -4.7 Ferrous-iron efflux pump FieF compare
MPMX19_04223 -0.9 -7.0 hypothetical protein compare
MPMX19_04114 -0.9 -3.4 hypothetical protein compare
MPMX19_03257 -0.9 -1.5 Glycine betaine/proline betaine transport system ATP-binding protein ProV compare
MPMX19_05362 -0.9 -2.0 hypothetical protein compare
MPMX19_04624 -0.9 -5.0 hypothetical protein compare
MPMX19_04198 -0.9 -6.0 hypothetical protein compare
MPMX19_05144 -0.9 -2.1 hypothetical protein compare
MPMX19_00148 -0.9 -2.4 hypothetical protein compare
MPMX19_04835 -0.9 -2.0 hypothetical protein compare
MPMX19_01496 -0.9 -5.3 hypothetical protein compare
MPMX19_01270 -0.8 -2.8 L-threonine ammonia-lyase compare
MPMX19_01249 -0.8 -1.6 Periplasmic serine endoprotease DegP compare
MPMX19_02801 -0.8 -1.5 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_06734 -0.8 -7.3 Alginate biosynthesis protein AlgA compare
MPMX19_03806 -0.8 -1.7 hypothetical protein compare
MPMX19_00868 -0.8 -7.1 Sensor kinase CckA compare
MPMX19_05624 -0.8 -1.4 hypothetical protein compare
MPMX19_01669 -0.8 -3.3 Transcriptional regulator MraZ compare
MPMX19_06099 -0.8 -5.1 hypothetical protein compare
MPMX19_03389 -0.8 -2.5 Carbon monoxide dehydrogenase small chain compare
MPMX19_02714 -0.8 -2.0 hypothetical protein compare
MPMX19_06985 -0.8 -1.7 L-malyl-CoA/beta-methylmalyl-CoA lyase compare
MPMX19_02803 -0.8 -2.3 putative FAD-linked oxidoreductase compare
MPMX19_04623 -0.8 -3.1 hypothetical protein compare
MPMX19_02927 -0.8 -2.7 5,6,7,8-tetrahydromethanopterin hydro-lyase compare
MPMX19_04276 -0.8 -1.3 hypothetical protein compare
MPMX19_05070 -0.8 -3.2 hypothetical protein compare
MPMX19_04392 -0.8 -1.6 Bifunctional methionine biosynthesis protein MetXA/MetW compare
MPMX19_06276 -0.8 -3.2 hypothetical protein compare
MPMX19_01654 -0.8 -5.1 HTH-type transcriptional regulator IscR compare
MPMX19_00851 -0.8 -4.6 hypothetical protein compare
MPMX19_04090 -0.8 -5.4 Anaerobic nitric oxide reductase transcription regulator NorR compare
MPMX19_06544 -0.8 -6.1 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) compare
MPMX19_00482 -0.8 -2.9 Sensor histidine kinase RcsC compare
MPMX19_06334 -0.8 -2.3 Arsenite oxidase subunit AioB compare
MPMX19_03741 -0.8 -1.8 hypothetical protein compare
MPMX19_02951 -0.8 -1.6 Deoxyribose-phosphate aldolase 1 compare
MPMX19_04210 -0.8 -1.4 hypothetical protein compare
MPMX19_03618 -0.8 -4.0 hypothetical protein compare
MPMX19_03653 -0.8 -3.7 Mannitol 2-dehydrogenase compare
MPMX19_04224 -0.8 -6.7 hypothetical protein compare
MPMX19_06750 -0.8 -2.1 Aliphatic sulfonates import ATP-binding protein SsuB compare
MPMX19_01482 -0.8 -5.1 hypothetical protein compare
MPMX19_05688 -0.7 -4.7 Sensor histidine kinase RcsC compare
MPMX19_02320 -0.7 -1.4 HTH-type transcriptional regulator GltR compare
MPMX19_06280 -0.7 -3.4 Leucine-responsive regulatory protein compare
MPMX19_01247 -0.7 -1.5 Transcriptional regulatory protein DegU compare
MPMX19_02979 -0.7 -2.8 Hydrogen cyanide synthase subunit HcnB compare
MPMX19_04091 -0.7 -4.6 Chemotaxis protein PomA compare
MPMX19_02207 -0.7 -1.6 N-(5'-phosphoribosyl)anthranilate isomerase compare
MPMX19_04409 -0.7 -2.4 hypothetical protein compare
MPMX19_02646 -0.7 -1.9 hypothetical protein compare
MPMX19_06001 -0.7 -2.4 hypothetical protein compare
MPMX19_06179 -0.7 -1.3 putative SURF1-like protein compare
MPMX19_00635 -0.7 -4.6 5,10-methylenetetrahydrofolate reductase compare
MPMX19_06762 -0.7 -1.5 Peptide deformylase compare
MPMX19_06281 -0.7 -1.8 hypothetical protein compare
MPMX19_03087 -0.7 -2.1 Protein FecR compare
MPMX19_05388 -0.7 -1.8 Leucine-responsive regulatory protein compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm_agar experiments