Experiment set1S80 for Azospirillum sp. SherDot2

Compare to:

NL-CCM_agar

200 most detrimental genes:

  gene name fitness t score description  
MPMX19_06197 +1.0 2.3 hypothetical protein compare
MPMX19_06207 +1.0 3.7 hypothetical protein compare
MPMX19_00725 +1.0 6.3 Transcriptional regulatory protein ros compare
MPMX19_02039 +0.9 4.4 hypothetical protein compare
MPMX19_02251 +0.9 2.6 hypothetical protein compare
MPMX19_01955 +0.9 1.7 Putative anti-sigma factor antagonist compare
MPMX19_00212 +0.8 7.0 Nitrogen fixation regulation protein FixK compare
MPMX19_03694 +0.8 1.7 hypothetical protein compare
MPMX19_01864 +0.8 1.5 Regulatory protein AtoC compare
MPMX19_04861 +0.8 2.0 hypothetical protein compare
MPMX19_00208 +0.8 2.3 hypothetical protein compare
MPMX19_02031 +0.8 1.7 tRNA (cytidine/uridine/adenosine-2'-O-)-methyltransferase TrmJ compare
MPMX19_02817 +0.7 2.6 Serine 3-dehydrogenase compare
MPMX19_03123 +0.7 1.6 Citrate lyase acyl carrier protein compare
MPMX19_02424 +0.7 2.6 hypothetical protein compare
MPMX19_05921 +0.7 2.0 hypothetical protein compare
MPMX19_06765 +0.7 0.7 Hydrogen peroxide-inducible genes activator compare
MPMX19_06519 +0.7 1.7 HTH-type transcriptional repressor NagR compare
MPMX19_05470 +0.7 2.3 hypothetical protein compare
MPMX19_03924 +0.7 1.4 hypothetical protein compare
MPMX19_06520 +0.7 1.7 Nitrate import ATP-binding protein NrtC compare
MPMX19_02218 +0.7 1.9 hypothetical protein compare
MPMX19_06379 +0.7 1.9 hypothetical protein compare
MPMX19_06272 +0.7 1.2 hypothetical protein compare
MPMX19_04682 +0.7 1.2 hypothetical protein compare
MPMX19_01045 +0.6 5.4 hypothetical protein compare
MPMX19_05656 +0.6 1.4 HTH-type transcriptional activator RhaR compare
MPMX19_03870 +0.6 2.0 L-aspartate dehydrogenase compare
MPMX19_05067 +0.6 1.8 hypothetical protein compare
MPMX19_01392 +0.6 5.0 hypothetical protein compare
MPMX19_06042 +0.6 3.8 hypothetical protein compare
MPMX19_06395 +0.6 1.9 Inner membrane protein YqaA compare
MPMX19_05193 +0.6 1.6 Taurine-binding periplasmic protein compare
MPMX19_06141 +0.6 2.2 Intermembrane phospholipid transport system permease protein MlaE compare
MPMX19_05850 +0.6 1.4 hypothetical protein compare
MPMX19_06815 +0.6 1.8 hypothetical protein compare
MPMX19_06385 +0.6 2.1 hypothetical protein compare
MPMX19_00211 +0.6 2.4 putative copper-importing P-type ATPase A compare
MPMX19_01701 +0.6 4.6 hypothetical protein compare
MPMX19_06027 +0.6 1.7 hypothetical protein compare
MPMX19_03100 +0.6 2.8 hypothetical protein compare
MPMX19_03891 +0.6 1.8 Aliphatic sulfonates import ATP-binding protein SsuB compare
MPMX19_05534 +0.6 1.6 DNA gyrase inhibitor YacG compare
MPMX19_00186 +0.6 1.4 hypothetical protein compare
MPMX19_00207 +0.5 2.9 hypothetical protein compare
MPMX19_03019 +0.5 2.0 hypothetical protein compare
MPMX19_01811 +0.5 1.7 hypothetical protein compare
MPMX19_03439 +0.5 1.6 hypothetical protein compare
MPMX19_01918 +0.5 0.9 tRNA-Ala compare
MPMX19_02735 +0.5 1.0 Sensor histidine kinase RcsC compare
MPMX19_04686 +0.5 2.8 Maleate isomerase compare
MPMX19_03819 +0.5 2.5 NADP-reducing hydrogenase subunit HndA compare
MPMX19_01832 +0.5 2.1 hypothetical protein compare
MPMX19_04081 +0.5 1.2 hypothetical protein compare
MPMX19_00839 +0.5 1.5 hypothetical protein compare
MPMX19_06843 +0.5 2.3 hypothetical protein compare
MPMX19_05221 +0.5 1.4 hypothetical protein compare
MPMX19_04669 +0.5 1.8 Glucose 1-dehydrogenase compare
MPMX19_01119 +0.5 1.7 hypothetical protein compare
MPMX19_01523 +0.5 2.2 Polar-differentiation response regulator DivK compare
MPMX19_03038 +0.5 2.2 hypothetical protein compare
MPMX19_00414 +0.5 1.3 Pyruvate dehydrogenase complex repressor compare
MPMX19_02937 +0.5 1.1 hypothetical protein compare
MPMX19_05906 +0.5 1.2 hypothetical protein compare
MPMX19_00209 +0.5 3.1 Cbb3-type cytochrome c oxidase subunit FixP compare
MPMX19_05152 +0.5 1.7 Phosphonoacetaldehyde hydrolase compare
MPMX19_01353 +0.5 1.4 hypothetical protein compare
MPMX19_05606 +0.5 0.9 hypothetical protein compare
MPMX19_04986 +0.5 1.8 hypothetical protein compare
MPMX19_04680 +0.5 1.6 Inner membrane ABC transporter permease protein YdcV compare
MPMX19_06763 +0.5 2.0 hypothetical protein compare
MPMX19_04042 +0.5 2.2 hypothetical protein compare
MPMX19_00244 +0.5 1.9 hypothetical protein compare
MPMX19_05011 +0.5 2.1 tRNA (cytidine(34)-2'-O)-methyltransferase compare
MPMX19_04219 +0.5 1.8 hypothetical protein compare
MPMX19_01840 +0.5 3.2 Nif-specific regulatory protein compare
MPMX19_03375 +0.5 2.4 Outer membrane protein TolC compare
MPMX19_02041 +0.5 1.2 Protein YciI compare
MPMX19_01153 +0.5 1.4 hypothetical protein compare
MPMX19_06373 +0.5 1.2 Lipoprotein signal peptidase compare
MPMX19_03884 +0.5 2.2 hypothetical protein compare
MPMX19_05729 +0.5 2.7 hypothetical protein compare
MPMX19_06812 +0.5 1.9 hypothetical protein compare
MPMX19_04937 +0.5 1.4 Mannosyl-D-glycerate transport/metabolism system repressor MngR compare
MPMX19_01957 +0.5 3.4 Sensor histidine kinase RcsC compare
MPMX19_03578 +0.5 1.5 HTH-type transcriptional regulator PgrR compare
MPMX19_03889 +0.5 2.8 hypothetical protein compare
MPMX19_05555 +0.5 2.4 Protein-glutamate methylesterase/protein-glutamine glutaminase compare
MPMX19_05622 +0.5 3.3 Sensor histidine kinase RegB compare
MPMX19_00064 +0.5 2.8 hypothetical protein compare
MPMX19_02869 +0.5 2.3 Sensor histidine kinase TmoS compare
MPMX19_06866 +0.5 1.6 HTH-type transcriptional regulator NimR compare
MPMX19_04995 +0.5 2.2 D-alanine aminotransferase compare
MPMX19_00206 +0.4 3.3 Cytochrome c oxidase subunit 1, bacteroid compare
MPMX19_02608 +0.4 2.0 hypothetical protein compare
MPMX19_01261 +0.4 3.4 Regulator of RpoS compare
MPMX19_02633 +0.4 2.6 Chaperone protein DnaJ compare
MPMX19_01940 +0.4 2.7 Ribosomal RNA large subunit methyltransferase H compare
MPMX19_04145 +0.4 1.3 hypothetical protein compare
MPMX19_03731 +0.4 2.1 hypothetical protein compare
MPMX19_02022 +0.4 2.4 ECF RNA polymerase sigma factor RpoE compare
MPMX19_04648 +0.4 2.0 hypothetical protein compare
MPMX19_02780 +0.4 2.1 hypothetical protein compare
MPMX19_00918 +0.4 2.1 hypothetical protein compare
MPMX19_06221 +0.4 2.0 L-2-keto-3-deoxyarabonate dehydratase compare
MPMX19_00872 +0.4 1.7 hypothetical protein compare
MPMX19_05352 +0.4 1.3 putative cysteine-rich protein YhjQ compare
MPMX19_01454 +0.4 1.0 hypothetical protein compare
MPMX19_03699 +0.4 1.6 Maltose/maltodextrin import ATP-binding protein MalK compare
MPMX19_01653 +0.4 2.5 Serine acetyltransferase compare
MPMX19_03014 +0.4 2.0 Transcriptional activatory protein AadR compare
MPMX19_05725 +0.4 1.1 hypothetical protein compare
MPMX19_00256 +0.4 1.9 hypothetical protein compare
MPMX19_04095 +0.4 1.4 hypothetical protein compare
MPMX19_06901 +0.4 2.6 Alpha-ketoglutaric semialdehyde dehydrogenase compare
MPMX19_00088 +0.4 1.8 HTH-type transcriptional regulator HdfR compare
MPMX19_05575 +0.4 1.6 hypothetical protein compare
MPMX19_01394 +0.4 0.7 hypothetical protein compare
MPMX19_06759 +0.4 1.3 Taurine import ATP-binding protein TauB compare
MPMX19_05014 +0.4 1.2 Cytochrome c1 compare
MPMX19_06948 +0.4 1.9 Peptidyl-lysine N-acetyltransferase Pat compare
MPMX19_02109 +0.4 1.8 hypothetical protein compare
MPMX19_03340 +0.4 1.1 hypothetical protein compare
MPMX19_02254 +0.4 1.6 hypothetical protein compare
MPMX19_02250 +0.4 2.4 hypothetical protein compare
MPMX19_04862 +0.4 1.7 hypothetical protein compare
MPMX19_05896 +0.4 1.3 hypothetical protein compare
MPMX19_06315 +0.4 0.8 ISL3 family transposase ISAli18 compare
MPMX19_02309 +0.4 2.0 hypothetical protein compare
MPMX19_05860 +0.4 2.1 3-oxoadipate enol-lactonase 2 compare
MPMX19_06355 +0.4 1.9 hypothetical protein compare
MPMX19_03072 +0.4 0.9 hypothetical protein compare
MPMX19_05192 +0.4 2.3 hypothetical protein compare
MPMX19_05167 +0.4 1.6 hypothetical protein compare
MPMX19_02865 +0.4 1.3 hypothetical protein compare
MPMX19_04826 +0.4 1.8 hypothetical protein compare
MPMX19_02149 +0.4 0.8 hypothetical protein compare
MPMX19_06273 +0.4 2.9 hypothetical protein compare
MPMX19_05393 +0.4 1.6 hypothetical protein compare
MPMX19_01875 +0.4 1.7 hypothetical protein compare
MPMX19_02795 +0.4 2.3 Homoaconitase large subunit compare
MPMX19_01629 +0.4 2.4 hypothetical protein compare
MPMX19_05178 +0.4 1.8 Alkanesulfonate monooxygenase compare
MPMX19_00190 +0.4 1.5 hypothetical protein compare
MPMX19_02502 +0.4 1.6 hypothetical protein compare
MPMX19_06874 +0.4 1.3 hypothetical protein compare
MPMX19_01725 +0.4 2.3 hypothetical protein compare
MPMX19_05013 +0.4 2.0 Cytochrome b compare
MPMX19_06497 +0.4 1.5 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_06510 +0.4 1.2 Aliphatic sulfonates import ATP-binding protein SsuB compare
MPMX19_02756 +0.4 2.2 Glutathione transport system permease protein GsiC compare
MPMX19_00049 +0.4 1.6 hypothetical protein compare
MPMX19_06381 +0.4 0.9 putative manganese efflux pump MntP compare
MPMX19_02353 +0.4 1.5 hypothetical protein compare
MPMX19_06989 +0.4 0.9 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_06482 +0.4 1.9 3-mercaptopropionate dioxygenase compare
MPMX19_00204 +0.4 1.5 hypothetical protein compare
MPMX19_05745 +0.4 2.9 Sensor histidine kinase RcsC compare
MPMX19_04791 +0.4 1.2 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial compare
MPMX19_03155 +0.4 1.3 hypothetical protein compare
MPMX19_02686 +0.4 2.1 hypothetical protein compare
MPMX19_04557 +0.4 2.0 Na(+)/H(+) antiporter NhaA compare
MPMX19_04633 +0.4 1.5 hypothetical protein compare
MPMX19_06886 +0.4 1.6 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_02791 +0.4 2.3 Haloalkane dehalogenase compare
MPMX19_01766 +0.4 2.1 Phosphate-specific transport system accessory protein PhoU compare
MPMX19_06351 +0.4 0.6 Arsenate reductase compare
MPMX19_00900 +0.4 3.2 hypothetical protein compare
MPMX19_06898 +0.4 2.1 FAD-dependent urate hydroxylase compare
MPMX19_02020 +0.4 1.5 hypothetical protein compare
MPMX19_04674 +0.4 2.3 hypothetical protein compare
MPMX19_06981 +0.4 1.4 hypothetical protein compare
MPMX19_05175 +0.4 1.5 hypothetical protein compare
MPMX19_00262 +0.4 0.9 Thiazole synthase compare
MPMX19_03667 +0.4 1.7 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_04066 +0.4 2.6 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA compare
MPMX19_04474 +0.4 1.6 hypothetical protein compare
MPMX19_02524 +0.4 2.7 tRNA pseudouridine synthase B compare
MPMX19_01926 +0.4 2.3 Small heat shock protein IbpA compare
MPMX19_00825 +0.4 2.0 hypothetical protein compare
MPMX19_06501 +0.4 2.8 hypothetical protein compare
MPMX19_00755 +0.4 1.5 hypothetical protein compare
MPMX19_04693 +0.4 1.5 hypothetical protein compare
MPMX19_06492 +0.4 1.3 IS5 family transposase ISAzs10 compare
MPMX19_06795 +0.4 1.0 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase compare
MPMX19_05578 +0.4 2.1 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_06610 +0.4 0.9 hypothetical protein compare
MPMX19_02136 +0.4 0.5 Phage shock protein A compare
MPMX19_04653 +0.4 2.0 Fumarate reductase flavoprotein subunit compare
MPMX19_05328 +0.4 1.0 hypothetical protein compare
MPMX19_04741 +0.4 1.7 Formyltransferase/hydrolase complex Fhc subunit B compare
MPMX19_06535 +0.4 1.3 hypothetical protein compare
MPMX19_06191 +0.3 1.8 hypothetical protein compare
MPMX19_05864 +0.3 1.9 Protocatechuate 3,4-dioxygenase alpha chain compare
MPMX19_05517 +0.3 1.8 High-affinity zinc uptake system membrane protein ZnuB compare
MPMX19_03959 +0.3 0.9 hypothetical protein compare
MPMX19_04243 +0.3 1.8 2,3-dehydroadipyl-CoA hydratase compare
MPMX19_04161 +0.3 1.1 hypothetical protein compare
MPMX19_06809 +0.3 2.2 Glutathione-regulated potassium-efflux system ancillary protein KefF compare
MPMX19_03557 +0.3 1.3 HTH-type transcriptional regulator CynR compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm_agar experiments