Experiment set1S79 for Azospirillum sp. SherDot2

Compare to:

NL-CCM_agar

200 most important genes:

  gene name fitness t score description  
MPMX19_03906 -3.6 -18.1 Pca regulon regulatory protein compare
MPMX19_05065 -2.7 -3.6 Farnesyl diphosphate synthase compare
MPMX19_02981 -2.6 -8.0 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_02543 -2.5 -2.9 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX19_01884 -2.5 -4.6 Phosphoribosylformylglycinamidine synthase subunit PurQ compare
MPMX19_00530 -2.3 -4.3 Orotate phosphoribosyltransferase compare
MPMX19_00126 -2.3 -4.5 hypothetical protein compare
MPMX19_04171 -2.2 -3.4 16S ribosomal RNA compare
MPMX19_02658 -2.2 -13.8 Glutamate synthase [NADPH] small chain compare
MPMX19_00705 -2.1 -3.7 Cell division coordinator CpoB compare
MPMX19_02657 -2.1 -16.8 Glutamate synthase [NADPH] large chain compare
MPMX19_02267 -2.1 -2.0 hypothetical protein compare
MPMX19_01054 -1.9 -6.5 Aspartate carbamoyltransferase compare
MPMX19_00128 -1.9 -11.7 hypothetical protein compare
MPMX19_01630 -1.8 -5.0 Phosphoribosylamine--glycine ligase compare
MPMX19_06275 -1.8 -11.7 Argininosuccinate lyase compare
MPMX19_01714 -1.8 -2.4 tRNA-modifying protein YgfZ compare
MPMX19_01113 -1.8 -3.1 Adaptive-response sensory-kinase SasA compare
MPMX19_01304 -1.8 -10.4 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX19_01883 -1.8 -8.2 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_02268 -1.7 -4.1 hypothetical protein compare
MPMX19_01053 -1.7 -4.4 Dihydroorotase compare
MPMX19_04092 -1.7 -8.3 Flagellar motor switch protein FliN compare
MPMX19_04623 -1.6 -6.0 hypothetical protein compare
MPMX19_00866 -1.6 -8.4 Flagellar biosynthetic protein FliR compare
MPMX19_02980 -1.6 -2.6 Hydrogen cyanide synthase subunit HcnA compare
MPMX19_06090 -1.6 -2.7 Pyruvate dehydrogenase complex repressor compare
MPMX19_01084 -1.6 -5.4 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX19_03694 -1.6 -2.4 hypothetical protein compare
MPMX19_04218 -1.6 -6.4 Protein phosphatase PrpC compare
MPMX19_04087 -1.6 -4.0 Flagellum site-determining protein YlxH compare
MPMX19_00714 -1.6 -7.4 Ferrous-iron efflux pump FieF compare
MPMX19_00976 -1.5 -2.8 ATP-dependent RNA helicase RhlE compare
MPMX19_02674 -1.5 -2.5 NADH:quinone reductase compare
MPMX19_00906 -1.5 -10.5 Amidophosphoribosyltransferase compare
MPMX19_02668 -1.5 -8.4 RNA polymerase sigma-54 factor 2 compare
MPMX19_04093 -1.4 -4.4 hypothetical protein compare
MPMX19_01495 -1.4 -2.9 hypothetical protein compare
MPMX19_04208 -1.4 -3.2 flagellum biosynthesis repressor protein FlbT compare
MPMX19_01494 -1.4 -6.9 Flagellar P-ring protein compare
MPMX19_01486 -1.4 -7.6 Flagellar L-ring protein compare
MPMX19_04090 -1.4 -8.0 Anaerobic nitric oxide reductase transcription regulator NorR compare
MPMX19_06277 -1.4 -8.1 hypothetical protein compare
MPMX19_01545 -1.4 -1.8 Lon protease compare
MPMX19_00862 -1.4 -8.1 hypothetical protein compare
MPMX19_00680 -1.4 -2.5 Elongation factor P--(R)-beta-lysine ligase compare
MPMX19_04000 -1.4 -4.0 Flagellar motor switch protein FliG compare
MPMX19_04200 -1.3 -7.4 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase compare
MPMX19_01481 -1.3 -10.1 Flagellar motor switch protein FliM compare
MPMX19_04204 -1.3 -7.3 D-alanine--D-alanyl carrier protein ligase compare
MPMX19_04276 -1.3 -2.7 hypothetical protein compare
MPMX19_04199 -1.3 -6.3 Pseudaminic acid synthase compare
MPMX19_00260 -1.3 -2.4 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_00129 -1.3 -1.4 hypothetical protein compare
MPMX19_00311 -1.3 -10.8 hypothetical protein compare
MPMX19_03752 -1.3 -2.1 hypothetical protein compare
MPMX19_04206 -1.3 -5.4 3-oxoacyl-[acyl-carrier-protein] synthase 3 compare
MPMX19_06580 -1.3 -4.9 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_04258 -1.2 -2.8 hypothetical protein compare
MPMX19_01249 -1.2 -1.9 Periplasmic serine endoprotease DegP compare
MPMX19_04835 -1.2 -3.0 hypothetical protein compare
MPMX19_00854 -1.2 -10.6 hypothetical protein compare
MPMX19_00304 -1.2 -3.1 Phosphatidylcholine synthase compare
MPMX19_05727 -1.2 -6.1 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX19_00864 -1.2 -3.3 Flagellar hook-basal body complex protein FliE compare
MPMX19_04222 -1.2 -9.6 hypothetical protein compare
MPMX19_01483 -1.2 -8.0 Flagellar basal-body rod protein FlgG compare
MPMX19_06700 -1.2 -2.2 Copper-sensing transcriptional repressor RicR compare
MPMX19_04207 -1.2 -3.6 hypothetical protein compare
MPMX19_00838 -1.2 -2.8 GTP pyrophosphokinase rsh compare
MPMX19_00867 -1.2 -9.3 Flagellar biosynthetic protein FlhB compare
MPMX19_05044 -1.2 -2.2 hypothetical protein compare
MPMX19_00863 -1.2 -6.2 Flagellar basal-body rod protein FlgC compare
MPMX19_00858 -1.2 -4.6 Flagellar biosynthetic protein FliP compare
MPMX19_02460 -1.2 -10.1 Motility protein A compare
MPMX19_01560 -1.2 -2.4 3'-5' exonuclease DinG compare
MPMX19_04089 -1.2 -8.9 Flagellar biosynthesis protein FlhA compare
MPMX19_05714 -1.1 -6.6 hypothetical protein compare
MPMX19_01936 -1.1 -9.3 hypothetical protein compare
MPMX19_01014 -1.1 -4.5 Indole-3-glycerol phosphate synthase compare
MPMX19_03435 -1.1 -3.2 hypothetical protein compare
MPMX19_01479 -1.1 -4.6 hypothetical protein compare
MPMX19_01349 -1.1 -7.5 hypothetical protein compare
MPMX19_01201 -1.1 -2.9 hypothetical protein compare
MPMX19_01485 -1.1 -7.3 hypothetical protein compare
MPMX19_01703 -1.1 -1.9 hypothetical protein compare
MPMX19_04622 -1.1 -6.9 hypothetical protein compare
MPMX19_01493 -1.1 -1.8 Flagellar assembly protein FliX compare
MPMX19_06581 -1.1 -7.1 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 2 compare
MPMX19_05679 -1.1 -7.8 Flagellum-specific ATP synthase compare
MPMX19_05387 -1.1 -2.7 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
MPMX19_01597 -1.1 -1.7 23S rRNA (uridine(2479)-2'-O)-methyltransferase compare
MPMX19_02675 -1.1 -8.4 Phosphoenolpyruvate-dependent phosphotransferase system compare
MPMX19_04198 -1.1 -7.9 hypothetical protein compare
MPMX19_02737 -1.1 -4.4 Tryptophan synthase alpha chain compare
MPMX19_04094 -1.1 -6.6 Flagellar M-ring protein compare
MPMX19_06577 -1.0 -7.4 hypothetical protein compare
MPMX19_05680 -1.0 -3.3 Cell cycle response regulator CtrA compare
MPMX19_03790 -1.0 -2.5 hypothetical protein compare
MPMX19_05798 -1.0 -2.0 HTH-type transcriptional repressor NanR compare
MPMX19_00912 -1.0 -7.2 Bifunctional uridylyltransferase/uridylyl-removing enzyme compare
MPMX19_01937 -1.0 -7.0 hypothetical protein compare
MPMX19_04391 -1.0 -5.5 Homoserine O-acetyltransferase compare
MPMX19_05690 -1.0 -5.7 Protein phosphotransferase ChpT compare
MPMX19_04223 -1.0 -8.3 hypothetical protein compare
MPMX19_03654 -1.0 -2.3 Fructokinase compare
MPMX19_00868 -1.0 -8.8 Sensor kinase CckA compare
MPMX19_00606 -1.0 -5.0 3-isopropylmalate dehydratase small subunit 1 compare
MPMX19_05119 -1.0 -7.4 Glucose-6-phosphate 1-dehydrogenase compare
MPMX19_04224 -1.0 -9.0 hypothetical protein compare
MPMX19_06547 -1.0 -4.2 hypothetical protein compare
MPMX19_01484 -1.0 -4.7 Flagellar basal-body rod protein FlgG compare
MPMX19_06734 -1.0 -8.5 Alginate biosynthesis protein AlgA compare
MPMX19_03226 -1.0 -2.6 hypothetical protein compare
MPMX19_04212 -1.0 -7.6 Photosystem I assembly protein Ycf3 compare
MPMX19_04869 -1.0 -3.9 DNA polymerase I compare
MPMX19_02303 -1.0 -2.2 hypothetical protein compare
MPMX19_03427 -1.0 -3.1 hypothetical protein compare
MPMX19_05438 -1.0 -2.6 hypothetical protein compare
MPMX19_01777 -1.0 -2.4 2-aminoadipate transaminase compare
MPMX19_00795 -1.0 -4.0 Adaptive-response sensory-kinase SasA compare
MPMX19_00329 -1.0 -3.8 Putative membrane protein insertion efficiency factor compare
MPMX19_06545 -1.0 -8.3 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase compare
MPMX19_06099 -1.0 -6.8 hypothetical protein compare
MPMX19_05687 -1.0 -4.1 Chemotaxis protein CheW compare
MPMX19_03504 -0.9 -2.2 Sulfur carrier protein FdhD compare
MPMX19_05176 -0.9 -1.8 4-hydroxy-3-prenylphenylpyruvate oxygenase/4-hydroxy-3-prenylbenzoate synthase compare
MPMX19_03618 -0.9 -5.2 hypothetical protein compare
MPMX19_06276 -0.9 -4.4 hypothetical protein compare
MPMX19_00503 -0.9 -3.4 ATP-dependent Clp protease ATP-binding subunit ClpA compare
MPMX19_01111 -0.9 -2.2 Sensory histidine kinase/phosphatase NtrB compare
MPMX19_06954 -0.9 -2.5 hypothetical protein compare
MPMX19_05333 -0.9 -1.5 Thymidine phosphorylase compare
MPMX19_04115 -0.9 -1.0 Sensor histidine kinase RcsC compare
MPMX19_04347 -0.9 -3.4 ATP-dependent Clp protease proteolytic subunit compare
MPMX19_01939 -0.9 -3.2 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
MPMX19_00467 -0.9 -5.1 Nitrogenase-stabilizing/protective protein NifW compare
MPMX19_03642 -0.9 -1.6 hypothetical protein compare
MPMX19_04205 -0.9 -3.1 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_06966 -0.9 -1.8 hypothetical protein compare
MPMX19_01499 -0.9 -2.6 hypothetical protein compare
MPMX19_05748 -0.9 -2.2 Response regulator SaeR compare
MPMX19_06644 -0.9 -7.6 GDP-mannose 4,6-dehydratase compare
MPMX19_02235 -0.9 -2.6 tRNA-Ala compare
MPMX19_04624 -0.9 -5.4 hypothetical protein compare
MPMX19_05016 -0.9 -1.7 Sensor histidine kinase RcsC compare
MPMX19_02979 -0.9 -3.4 Hydrogen cyanide synthase subunit HcnB compare
MPMX19_00122 -0.9 -2.8 hypothetical protein compare
MPMX19_06544 -0.9 -6.6 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) compare
MPMX19_00790 -0.8 -1.6 hypothetical protein compare
MPMX19_01015 -0.8 -3.6 Anthranilate phosphoribosyltransferase compare
MPMX19_03635 -0.8 -1.1 DNA-binding transcriptional activator DecR compare
MPMX19_04091 -0.8 -5.9 Chemotaxis protein PomA compare
MPMX19_02618 -0.8 -1.8 Transcriptional regulatory protein BaeR compare
MPMX19_02736 -0.8 -5.6 Tryptophan synthase beta chain compare
MPMX19_05445 -0.8 -2.5 tRNA-Glu compare
MPMX19_01480 -0.8 -2.6 hypothetical protein compare
MPMX19_01565 -0.8 -2.1 hypothetical protein compare
MPMX19_06585 -0.8 -7.3 hypothetical protein compare
MPMX19_01822 -0.8 -3.9 2-isopropylmalate synthase compare
MPMX19_03734 -0.8 -1.2 RutC family protein YjgH compare
MPMX19_05023 -0.8 -1.5 hypothetical protein compare
MPMX19_03976 -0.8 -3.3 hypothetical protein compare
MPMX19_05678 -0.8 -3.7 hypothetical protein compare
MPMX19_03634 -0.8 -2.3 Arginase compare
MPMX19_02613 -0.8 -1.9 hypothetical protein compare
MPMX19_06253 -0.8 -1.7 hypothetical protein compare
MPMX19_02553 -0.8 -3.6 Protein-export protein SecB compare
MPMX19_06878 -0.8 -2.5 Putative amino-acid ABC transporter-binding protein YhdW compare
MPMX19_00635 -0.8 -5.4 5,10-methylenetetrahydrofolate reductase compare
MPMX19_06582 -0.8 -6.0 hypothetical protein compare
MPMX19_00687 -0.8 -1.4 hypothetical protein compare
MPMX19_06509 -0.7 -2.0 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_06880 -0.7 -1.4 Validamycin A dioxygenase compare
MPMX19_04112 -0.7 -3.0 hypothetical protein compare
MPMX19_02223 -0.7 -5.9 Ammonia channel compare
MPMX19_01496 -0.7 -4.9 hypothetical protein compare
MPMX19_00152 -0.7 -1.2 hypothetical protein compare
MPMX19_00319 -0.7 -1.2 hypothetical protein compare
MPMX19_01917 -0.7 -1.6 hypothetical protein compare
MPMX19_01101 -0.7 -2.1 hypothetical protein compare
MPMX19_01321 -0.7 -2.7 tRNA-Cys compare
MPMX19_01998 -0.7 -3.1 3-isopropylmalate dehydratase large subunit compare
MPMX19_05954 -0.7 -3.2 hypothetical protein compare
MPMX19_04948 -0.7 -1.1 HTH-type transcriptional regulator GltR compare
MPMX19_05271 -0.7 -1.7 hypothetical protein compare
MPMX19_06230 -0.7 -1.6 hypothetical protein compare
MPMX19_05328 -0.7 -1.8 hypothetical protein compare
MPMX19_06267 -0.7 -2.4 hypothetical protein compare
MPMX19_03342 -0.7 -1.4 hypothetical protein compare
MPMX19_05872 -0.7 -2.0 Redox-sensitive transcriptional activator SoxR compare
MPMX19_04046 -0.7 -2.8 hypothetical protein compare
MPMX19_03613 -0.7 -2.0 N-acetylglucosamine-6-phosphate deacetylase compare
MPMX19_06930 -0.7 -1.4 Sensor kinase CckA compare
MPMX19_01913 -0.7 -4.3 hypothetical protein compare
MPMX19_01042 -0.7 -2.9 hypothetical protein compare
MPMX19_01482 -0.7 -5.2 hypothetical protein compare
MPMX19_00607 -0.7 -4.6 3-isopropylmalate dehydrogenase compare
MPMX19_00748 -0.7 -2.6 Organic hydroperoxide resistance transcriptional regulator compare
MPMX19_04996 -0.7 -2.0 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm_agar experiments