Experiment set1S75 for Azospirillum sp. SherDot2

Compare to:

NL-CCM; low oxygen

200 most important genes:

  gene name fitness t score description  
MPMX19_01395 -2.1 -2.5 hypothetical protein compare
MPMX19_06746 -2.1 -2.7 Chemotaxis protein CheW compare
MPMX19_00705 -1.9 -3.5 Cell division coordinator CpoB compare
MPMX19_02951 -1.8 -2.6 Deoxyribose-phosphate aldolase 1 compare
MPMX19_01297 -1.7 -2.5 hypothetical protein compare
MPMX19_00304 -1.6 -3.2 Phosphatidylcholine synthase compare
MPMX19_01883 -1.5 -6.8 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_01075 -1.5 -2.3 Molybdopterin synthase sulfur carrier subunit compare
MPMX19_05144 -1.4 -1.5 hypothetical protein compare
MPMX19_04206 -1.4 -4.6 3-oxoacyl-[acyl-carrier-protein] synthase 3 compare
MPMX19_02303 -1.4 -2.9 hypothetical protein compare
MPMX19_05044 -1.3 -2.2 hypothetical protein compare
MPMX19_04390 -1.3 -2.6 hypothetical protein compare
MPMX19_04218 -1.3 -5.3 Protein phosphatase PrpC compare
MPMX19_00530 -1.3 -3.1 Orotate phosphoribosyltransferase compare
MPMX19_00680 -1.3 -2.5 Elongation factor P--(R)-beta-lysine ligase compare
MPMX19_02664 -1.2 -1.8 Arabinose 5-phosphate isomerase KdsD compare
MPMX19_04210 -1.2 -2.1 hypothetical protein compare
MPMX19_01495 -1.2 -2.4 hypothetical protein compare
MPMX19_04225 -1.2 -4.6 hypothetical protein compare
MPMX19_02235 -1.2 -3.6 tRNA-Ala compare
MPMX19_00794 -1.2 -2.8 Transcriptional activator protein CopR compare
MPMX19_06546 -1.1 -2.6 hypothetical protein compare
MPMX19_04094 -1.1 -7.1 Flagellar M-ring protein compare
MPMX19_00128 -1.1 -7.9 hypothetical protein compare
MPMX19_04258 -1.1 -3.8 hypothetical protein compare
MPMX19_01491 -1.1 -2.3 hypothetical protein compare
MPMX19_00887 -1.1 -2.0 hypothetical protein compare
MPMX19_01304 -1.1 -6.8 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX19_06785 -1.1 -2.3 L-idonate 5-dehydrogenase (NAD(P)(+)) compare
MPMX19_00061 -1.1 -2.7 L-lysine 2,3-aminomutase compare
MPMX19_04835 -1.1 -2.5 hypothetical protein compare
MPMX19_04200 -1.1 -5.6 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase compare
MPMX19_04864 -1.1 -2.6 hypothetical protein compare
MPMX19_00862 -1.1 -5.6 hypothetical protein compare
MPMX19_00695 -1.0 -1.9 putative transcriptional regulatory protein compare
MPMX19_02267 -1.0 -1.5 hypothetical protein compare
MPMX19_00838 -1.0 -2.5 GTP pyrophosphokinase rsh compare
MPMX19_00863 -1.0 -5.7 Flagellar basal-body rod protein FlgC compare
MPMX19_05714 -1.0 -6.1 hypothetical protein compare
MPMX19_05680 -1.0 -3.1 Cell cycle response regulator CtrA compare
MPMX19_02136 -1.0 -1.5 Phage shock protein A compare
MPMX19_02742 -1.0 -2.4 hypothetical protein compare
MPMX19_05065 -1.0 -2.0 Farnesyl diphosphate synthase compare
MPMX19_01483 -1.0 -6.8 Flagellar basal-body rod protein FlgG compare
MPMX19_04205 -1.0 -2.6 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_01342 -1.0 -2.3 hypothetical protein compare
MPMX19_01610 -1.0 -2.0 ATP-dependent DNA helicase PcrA compare
MPMX19_05727 -1.0 -4.9 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX19_01497 -1.0 -3.1 hypothetical protein compare
MPMX19_06006 -1.0 -2.9 hypothetical protein compare
MPMX19_02268 -1.0 -3.0 hypothetical protein compare
MPMX19_06547 -1.0 -4.4 hypothetical protein compare
MPMX19_04092 -1.0 -5.0 Flagellar motor switch protein FliN compare
MPMX19_01597 -0.9 -1.9 23S rRNA (uridine(2479)-2'-O)-methyltransferase compare
MPMX19_00858 -0.9 -3.6 Flagellar biosynthetic protein FliP compare
MPMX19_00860 -0.9 -2.4 hypothetical protein compare
MPMX19_01085 -0.9 -3.6 hypothetical protein compare
MPMX19_01484 -0.9 -4.6 Flagellar basal-body rod protein FlgG compare
MPMX19_00262 -0.9 -1.7 Thiazole synthase compare
MPMX19_00366 -0.9 -3.5 hypothetical protein compare
MPMX19_04079 -0.9 -1.7 hypothetical protein compare
MPMX19_01884 -0.9 -2.4 Phosphoribosylformylglycinamidine synthase subunit PurQ compare
MPMX19_05834 -0.9 -1.8 Hydrogen peroxide-inducible genes activator compare
MPMX19_05818 -0.9 -1.1 hypothetical protein compare
MPMX19_01652 -0.9 -2.6 hypothetical protein compare
MPMX19_01822 -0.9 -4.1 2-isopropylmalate synthase compare
MPMX19_00748 -0.9 -3.0 Organic hydroperoxide resistance transcriptional regulator compare
MPMX19_04093 -0.9 -2.9 hypothetical protein compare
MPMX19_01486 -0.9 -4.9 Flagellar L-ring protein compare
MPMX19_02668 -0.9 -5.6 RNA polymerase sigma-54 factor 2 compare
MPMX19_01394 -0.9 -1.2 hypothetical protein compare
MPMX19_04952 -0.9 -1.6 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_05684 -0.9 -4.9 Chemotaxis protein methyltransferase 1 compare
MPMX19_00766 -0.9 -2.0 hypothetical protein compare
MPMX19_04223 -0.9 -6.9 hypothetical protein compare
MPMX19_01054 -0.8 -3.3 Aspartate carbamoyltransferase compare
MPMX19_03851 -0.8 -2.8 hypothetical protein compare
MPMX19_06808 -0.8 -1.7 HTH-type transcriptional regulator DmlR compare
MPMX19_02234 -0.8 -3.6 hypothetical protein compare
MPMX19_01630 -0.8 -2.8 Phosphoribosylamine--glycine ligase compare
MPMX19_02514 -0.8 -1.3 hypothetical protein compare
MPMX19_01936 -0.8 -6.4 hypothetical protein compare
MPMX19_04207 -0.8 -2.2 hypothetical protein compare
MPMX19_06580 -0.8 -3.6 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_05901 -0.8 -1.3 Motility protein B compare
MPMX19_01796 -0.8 -0.8 hypothetical protein compare
MPMX19_01376 -0.8 -2.0 hypothetical protein compare
MPMX19_01485 -0.8 -5.4 hypothetical protein compare
MPMX19_01605 -0.8 -4.7 Chemotaxis protein CheY compare
MPMX19_04222 -0.8 -6.6 hypothetical protein compare
MPMX19_04636 -0.8 -1.9 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_06567 -0.8 -1.9 hypothetical protein compare
MPMX19_04087 -0.8 -2.4 Flagellum site-determining protein YlxH compare
MPMX19_01481 -0.8 -6.0 Flagellar motor switch protein FliM compare
MPMX19_01585 -0.8 -2.0 Zinc uptake regulation protein compare
MPMX19_04208 -0.8 -2.1 flagellum biosynthesis repressor protein FlbT compare
MPMX19_04563 -0.8 -1.8 hypothetical protein compare
MPMX19_03929 -0.8 -2.6 hypothetical protein compare
MPMX19_02085 -0.8 -2.2 hypothetical protein compare
MPMX19_03035 -0.8 -2.3 Protein YceI compare
MPMX19_01860 -0.8 -2.8 hypothetical protein compare
MPMX19_05355 -0.8 -2.2 Transcriptional regulator SlyA compare
MPMX19_00933 -0.8 -2.3 hypothetical protein compare
MPMX19_06880 -0.8 -1.2 Validamycin A dioxygenase compare
MPMX19_04638 -0.8 -1.5 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_04204 -0.8 -4.4 D-alanine--D-alanyl carrier protein ligase compare
MPMX19_01149 -0.8 -3.5 Polyphosphate kinase compare
MPMX19_04734 -0.8 -2.4 5,6,7,8-tetrahydromethanopterin hydro-lyase compare
MPMX19_02543 -0.8 -1.5 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX19_04276 -0.8 -1.8 hypothetical protein compare
MPMX19_00867 -0.8 -6.3 Flagellar biosynthetic protein FlhB compare
MPMX19_06353 -0.8 -1.2 hypothetical protein compare
MPMX19_00996 -0.8 -3.3 Metalloprotease MmpA compare
MPMX19_04090 -0.8 -4.9 Anaerobic nitric oxide reductase transcription regulator NorR compare
MPMX19_02559 -0.8 -1.9 7-methyl-GTP pyrophosphatase compare
MPMX19_03194 -0.7 -1.2 hypothetical protein compare
MPMX19_01545 -0.7 -1.1 Lon protease compare
MPMX19_03276 -0.7 -2.0 hypothetical protein compare
MPMX19_00020 -0.7 -1.1 hypothetical protein compare
MPMX19_01321 -0.7 -2.2 tRNA-Cys compare
MPMX19_00344 -0.7 -1.8 hypothetical protein compare
MPMX19_03642 -0.7 -1.3 hypothetical protein compare
MPMX19_05100 -0.7 -2.1 hypothetical protein compare
MPMX19_04535 -0.7 -1.5 Maleate isomerase compare
MPMX19_06448 -0.7 -2.2 hypothetical protein compare
MPMX19_03064 -0.7 -2.5 Cytochrome c-type protein NapC compare
MPMX19_06266 -0.7 -1.3 hypothetical protein compare
MPMX19_01014 -0.7 -3.0 Indole-3-glycerol phosphate synthase compare
MPMX19_00854 -0.7 -6.4 hypothetical protein compare
MPMX19_05658 -0.7 -2.0 hypothetical protein compare
MPMX19_02202 -0.7 -1.5 hypothetical protein compare
MPMX19_06928 -0.7 -1.3 hypothetical protein compare
MPMX19_04325 -0.7 -3.2 hypothetical protein compare
MPMX19_05387 -0.7 -1.8 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
MPMX19_00311 -0.7 -6.2 hypothetical protein compare
MPMX19_00906 -0.7 -5.3 Amidophosphoribosyltransferase compare
MPMX19_06923 -0.7 -1.7 hypothetical protein compare
MPMX19_01084 -0.7 -2.7 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX19_02737 -0.7 -3.6 Tryptophan synthase alpha chain compare
MPMX19_01314 -0.7 -3.3 hypothetical protein compare
MPMX19_04199 -0.7 -4.3 Pseudaminic acid synthase compare
MPMX19_04522 -0.7 -2.2 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_04409 -0.7 -2.1 hypothetical protein compare
MPMX19_06581 -0.7 -4.3 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 2 compare
MPMX19_04212 -0.7 -5.4 Photosystem I assembly protein Ycf3 compare
MPMX19_04089 -0.7 -5.5 Flagellar biosynthesis protein FlhA compare
MPMX19_00866 -0.7 -3.9 Flagellar biosynthetic protein FliR compare
MPMX19_03816 -0.7 -1.6 hypothetical protein compare
MPMX19_03552 -0.7 -1.6 hypothetical protein compare
MPMX19_06545 -0.7 -5.7 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase compare
MPMX19_01777 -0.7 -1.9 2-aminoadipate transaminase compare
MPMX19_05679 -0.7 -4.6 Flagellum-specific ATP synthase compare
MPMX19_00864 -0.7 -2.2 Flagellar hook-basal body complex protein FliE compare
MPMX19_02881 -0.7 -2.6 hypothetical protein compare
MPMX19_04968 -0.6 -1.5 hypothetical protein compare
MPMX19_05911 -0.6 -2.2 hypothetical protein compare
MPMX19_01499 -0.6 -2.2 hypothetical protein compare
MPMX19_05438 -0.6 -1.8 hypothetical protein compare
MPMX19_06137 -0.6 -2.1 hypothetical protein compare
MPMX19_04492 -0.6 -1.4 hypothetical protein compare
MPMX19_02539 -0.6 -2.4 hypothetical protein compare
MPMX19_05119 -0.6 -4.7 Glucose-6-phosphate 1-dehydrogenase compare
MPMX19_01714 -0.6 -1.1 tRNA-modifying protein YgfZ compare
MPMX19_05677 -0.6 -2.6 hypothetical protein compare
MPMX19_02657 -0.6 -5.6 Glutamate synthase [NADPH] large chain compare
MPMX19_00633 -0.6 -3.4 Intermembrane phospholipid transport system lipoprotein MlaA compare
MPMX19_03453 -0.6 -2.0 Putative aliphatic sulfonates-binding protein compare
MPMX19_01494 -0.6 -4.1 Flagellar P-ring protein compare
MPMX19_05733 -0.6 -1.3 Biopolymer transport protein ExbD compare
MPMX19_04198 -0.6 -4.9 hypothetical protein compare
MPMX19_05235 -0.6 -1.9 HTH-type transcriptional regulator BetI compare
MPMX19_00978 -0.6 -1.9 hypothetical protein compare
MPMX19_05678 -0.6 -2.8 hypothetical protein compare
MPMX19_03654 -0.6 -1.5 Fructokinase compare
MPMX19_05496 -0.6 -2.0 hypothetical protein compare
MPMX19_04622 -0.6 -3.9 hypothetical protein compare
MPMX19_01748 -0.6 -1.5 hypothetical protein compare
MPMX19_03976 -0.6 -2.6 hypothetical protein compare
MPMX19_04043 -0.6 -1.6 Aldehyde-alcohol dehydrogenase compare
MPMX19_02981 -0.6 -2.6 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_02297 -0.6 -2.8 hypothetical protein compare
MPMX19_06544 -0.6 -4.5 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) compare
MPMX19_02607 -0.6 -2.1 hypothetical protein compare
MPMX19_02460 -0.6 -5.3 Motility protein A compare
MPMX19_02980 -0.6 -1.1 Hydrogen cyanide synthase subunit HcnA compare
MPMX19_06112 -0.6 -2.1 hypothetical protein compare
MPMX19_04000 -0.6 -1.7 Flagellar motor switch protein FliG compare
MPMX19_04359 -0.6 -2.0 Ferredoxin, 2Fe-2S compare
MPMX19_02658 -0.6 -4.6 Glutamate synthase [NADPH] small chain compare
MPMX19_03369 -0.6 -1.6 hypothetical protein compare
MPMX19_04579 -0.6 -1.9 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX19_01142 -0.6 -2.4 hypothetical protein compare
MPMX19_01912 -0.6 -1.6 Acetyl-CoA acetyltransferase compare
MPMX19_02779 -0.6 -1.3 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_01937 -0.6 -4.2 hypothetical protein compare
MPMX19_01493 -0.6 -1.8 Flagellar assembly protein FliX compare
MPMX19_06327 -0.6 -1.1 hypothetical protein compare
MPMX19_00868 -0.6 -5.0 Sensor kinase CckA compare
MPMX19_00237 -0.6 -1.9 Cysteine synthase compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm; low oxygen experiments