Experiment set1S74 for Azospirillum sp. SherDot2

Compare to:

NL-CCM; low oxygen

200 most important genes:

  gene name fitness t score description  
MPMX19_03369 -2.2 -2.9 hypothetical protein compare
MPMX19_02267 -1.9 -1.8 hypothetical protein compare
MPMX19_00705 -1.5 -3.2 Cell division coordinator CpoB compare
MPMX19_00790 -1.5 -2.3 hypothetical protein compare
MPMX19_04008 -1.4 -2.5 Beta-peptidyl aminopeptidase BapA compare
MPMX19_02613 -1.4 -2.6 hypothetical protein compare
MPMX19_03787 -1.3 -1.2 hypothetical protein compare
MPMX19_00260 -1.3 -2.4 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_00530 -1.3 -3.3 Orotate phosphoribosyltransferase compare
MPMX19_03450 -1.3 -1.9 hypothetical protein compare
MPMX19_02268 -1.3 -3.2 hypothetical protein compare
MPMX19_03734 -1.2 -2.1 RutC family protein YjgH compare
MPMX19_00304 -1.2 -2.7 Phosphatidylcholine synthase compare
MPMX19_01084 -1.2 -4.2 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX19_04145 -1.1 -2.2 hypothetical protein compare
MPMX19_02298 -1.1 -2.7 hypothetical protein compare
MPMX19_01247 -1.1 -1.8 Transcriptional regulatory protein DegU compare
MPMX19_01714 -1.1 -1.7 tRNA-modifying protein YgfZ compare
MPMX19_01304 -1.1 -6.6 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX19_00839 -1.1 -1.5 hypothetical protein compare
MPMX19_00838 -1.1 -2.4 GTP pyrophosphokinase rsh compare
MPMX19_02737 -1.1 -5.0 Tryptophan synthase alpha chain compare
MPMX19_03825 -1.1 -1.8 IS5 family transposase IS4811 compare
MPMX19_01883 -1.0 -5.3 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_00794 -1.0 -3.0 Transcriptional activator protein CopR compare
MPMX19_00182 -1.0 -1.6 hypothetical protein compare
MPMX19_06034 -1.0 -3.7 Phosphate transport system permease protein PstA compare
MPMX19_01777 -1.0 -2.1 2-aminoadipate transaminase compare
MPMX19_03693 -1.0 -2.5 hypothetical protein compare
MPMX19_05872 -1.0 -2.0 Redox-sensitive transcriptional activator SoxR compare
MPMX19_02579 -0.9 -1.6 hypothetical protein compare
MPMX19_01822 -0.9 -4.2 2-isopropylmalate synthase compare
MPMX19_03609 -0.9 -2.1 HTH-type transcriptional repressor NagR compare
MPMX19_01014 -0.9 -3.5 Indole-3-glycerol phosphate synthase compare
MPMX19_05733 -0.9 -1.8 Biopolymer transport protein ExbD compare
MPMX19_01586 -0.9 -2.5 hypothetical protein compare
MPMX19_05680 -0.9 -2.7 Cell cycle response regulator CtrA compare
MPMX19_00061 -0.9 -2.2 L-lysine 2,3-aminomutase compare
MPMX19_02402 -0.9 -1.6 hypothetical protein compare
MPMX19_04325 -0.9 -3.8 hypothetical protein compare
MPMX19_02543 -0.9 -1.5 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX19_04359 -0.9 -2.4 Ferredoxin, 2Fe-2S compare
MPMX19_02951 -0.9 -1.6 Deoxyribose-phosphate aldolase 1 compare
MPMX19_05818 -0.9 -1.5 hypothetical protein compare
MPMX19_00126 -0.9 -1.6 hypothetical protein compare
MPMX19_05581 -0.9 -1.4 hypothetical protein compare
MPMX19_06090 -0.8 -1.7 Pyruvate dehydrogenase complex repressor compare
MPMX19_05016 -0.8 -1.0 Sensor histidine kinase RcsC compare
MPMX19_00478 -0.8 -1.5 putative protein RP812 compare
MPMX19_01321 -0.8 -2.7 tRNA-Cys compare
MPMX19_04208 -0.8 -2.6 flagellum biosynthesis repressor protein FlbT compare
MPMX19_03007 -0.8 -2.6 Arabinose import ATP-binding protein AraG compare
MPMX19_04171 -0.8 -1.6 16S ribosomal RNA compare
MPMX19_01610 -0.8 -1.7 ATP-dependent DNA helicase PcrA compare
MPMX19_05601 -0.8 -3.1 putative ABC transporter ATP-binding protein YejF compare
MPMX19_05044 -0.8 -1.5 hypothetical protein compare
MPMX19_01616 -0.8 -1.7 hypothetical protein compare
MPMX19_05023 -0.8 -1.2 hypothetical protein compare
MPMX19_00152 -0.8 -1.4 hypothetical protein compare
MPMX19_01400 -0.8 -1.6 hypothetical protein compare
MPMX19_00128 -0.8 -5.8 hypothetical protein compare
MPMX19_03342 -0.8 -1.8 hypothetical protein compare
MPMX19_02714 -0.8 -1.8 hypothetical protein compare
MPMX19_04512 -0.8 -3.4 C4-dicarboxylate transport transcriptional regulatory protein DctD compare
MPMX19_00694 -0.8 -1.7 2',3'-cyclic-nucleotide 2'-phosphodiesterase compare
MPMX19_05605 -0.7 -2.2 hypothetical protein compare
MPMX19_05727 -0.7 -3.9 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX19_02460 -0.7 -6.5 Motility protein A compare
MPMX19_02950 -0.7 -2.7 Deoxyribose operon repressor compare
MPMX19_02207 -0.7 -1.9 N-(5'-phosphoribosyl)anthranilate isomerase compare
MPMX19_05505 -0.7 -1.4 Leucine-responsive regulatory protein compare
MPMX19_01297 -0.7 -1.4 hypothetical protein compare
MPMX19_05144 -0.7 -1.4 hypothetical protein compare
MPMX19_00887 -0.7 -1.4 hypothetical protein compare
MPMX19_03822 -0.7 -1.5 Sulfur carrier protein FdhD compare
MPMX19_02618 -0.7 -1.1 Transcriptional regulatory protein BaeR compare
MPMX19_04996 -0.7 -1.8 hypothetical protein compare
MPMX19_05624 -0.7 -1.3 hypothetical protein compare
MPMX19_01834 -0.7 -1.5 hypothetical protein compare
MPMX19_00608 -0.7 -0.8 hypothetical protein compare
MPMX19_00841 -0.7 -1.2 Holo-[acyl-carrier-protein] synthase compare
MPMX19_03859 -0.7 -1.7 hypothetical protein compare
MPMX19_05181 -0.7 -1.4 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_04701 -0.7 -1.6 Transcriptional regulatory protein FixJ compare
MPMX19_00633 -0.7 -3.4 Intermembrane phospholipid transport system lipoprotein MlaA compare
MPMX19_02234 -0.7 -2.8 hypothetical protein compare
MPMX19_04610 -0.7 -1.9 putative enoyl-CoA hydratase 1 compare
MPMX19_04554 -0.7 -2.1 Response regulator PleD compare
MPMX19_02235 -0.7 -2.2 tRNA-Ala compare
MPMX19_01703 -0.7 -1.4 hypothetical protein compare
MPMX19_01577 -0.7 -2.1 hypothetical protein compare
MPMX19_05989 -0.7 -1.7 HTH-type transcriptional regulator HdfR compare
MPMX19_01648 -0.7 -2.5 hypothetical protein compare
MPMX19_03023 -0.7 -2.4 Maltose O-acetyltransferase compare
MPMX19_03722 -0.7 -1.2 hypothetical protein compare
MPMX19_03870 -0.6 -1.3 L-aspartate dehydrogenase compare
MPMX19_01605 -0.6 -4.0 Chemotaxis protein CheY compare
MPMX19_05388 -0.6 -1.9 Leucine-responsive regulatory protein compare
MPMX19_04862 -0.6 -2.5 hypothetical protein compare
MPMX19_05915 -0.6 -1.3 Flagellar M-ring protein compare
MPMX19_02527 -0.6 -2.3 hypothetical protein compare
MPMX19_06230 -0.6 -1.5 hypothetical protein compare
MPMX19_01912 -0.6 -1.8 Acetyl-CoA acetyltransferase compare
MPMX19_04956 -0.6 -3.2 5-oxoprolinase subunit B compare
MPMX19_05684 -0.6 -3.5 Chemotaxis protein methyltransferase 1 compare
MPMX19_03165 -0.6 -1.5 hypothetical protein compare
MPMX19_05438 -0.6 -1.7 hypothetical protein compare
MPMX19_05217 -0.6 -1.2 Flagellin compare
MPMX19_04838 -0.6 -2.8 Heme oxygenase (staphylobilin-producing) compare
MPMX19_01395 -0.6 -1.2 hypothetical protein compare
MPMX19_00211 -0.6 -1.8 putative copper-importing P-type ATPase A compare
MPMX19_04218 -0.6 -2.9 Protein phosphatase PrpC compare
MPMX19_00746 -0.6 -2.2 hypothetical protein compare
MPMX19_06253 -0.6 -1.3 hypothetical protein compare
MPMX19_02769 -0.6 -2.1 Ribokinase compare
MPMX19_01936 -0.6 -5.0 hypothetical protein compare
MPMX19_03072 -0.6 -0.8 hypothetical protein compare
MPMX19_02735 -0.6 -0.9 Sensor histidine kinase RcsC compare
MPMX19_04326 -0.6 -2.1 Beta-hexosaminidase compare
MPMX19_04622 -0.6 -3.8 hypothetical protein compare
MPMX19_01937 -0.6 -4.5 hypothetical protein compare
MPMX19_02657 -0.6 -5.4 Glutamate synthase [NADPH] large chain compare
MPMX19_03081 -0.6 -1.8 Protein FecR compare
MPMX19_01884 -0.6 -1.5 Phosphoribosylformylglycinamidine synthase subunit PurQ compare
MPMX19_01708 -0.6 -1.5 hypothetical protein compare
MPMX19_04289 -0.6 -3.3 hypothetical protein compare
MPMX19_01314 -0.6 -2.4 hypothetical protein compare
MPMX19_05314 -0.6 -1.4 hypothetical protein compare
MPMX19_03806 -0.6 -1.8 hypothetical protein compare
MPMX19_06926 -0.6 -1.8 hypothetical protein compare
MPMX19_04010 -0.6 -1.1 Isoaspartyl peptidase compare
MPMX19_01630 -0.6 -2.0 Phosphoribosylamine--glycine ligase compare
MPMX19_01499 -0.6 -1.9 hypothetical protein compare
MPMX19_00319 -0.6 -0.9 hypothetical protein compare
MPMX19_03340 -0.6 -1.1 hypothetical protein compare
MPMX19_02981 -0.6 -2.5 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_02860 -0.6 -1.7 hypothetical protein compare
MPMX19_05719 -0.6 -1.1 hypothetical protein compare
MPMX19_00205 -0.6 -2.3 hypothetical protein compare
MPMX19_01076 -0.6 -1.1 Molybdopterin synthase catalytic subunit compare
MPMX19_00882 -0.6 -4.0 Metalloprotease TldD compare
MPMX19_06601 -0.5 -1.8 hypothetical protein compare
MPMX19_06947 -0.5 -1.7 hypothetical protein compare
MPMX19_06438 -0.5 -2.8 DNA-invertase hin compare
MPMX19_05553 -0.5 -1.5 hypothetical protein compare
MPMX19_06417 -0.5 -2.3 Transcriptional regulatory protein OmpR compare
MPMX19_03360 -0.5 -1.3 hypothetical protein compare
MPMX19_03126 -0.5 -1.8 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase compare
MPMX19_06808 -0.5 -0.9 HTH-type transcriptional regulator DmlR compare
MPMX19_05313 -0.5 -1.1 4,4'-diapolycopene aldehyde oxidase compare
MPMX19_01015 -0.5 -1.8 Anthranilate phosphoribosyltransferase compare
MPMX19_03790 -0.5 -1.3 hypothetical protein compare
MPMX19_04921 -0.5 -1.3 HTH-type transcriptional regulator PuuR compare
MPMX19_03646 -0.5 -2.2 Histidinol-phosphate aminotransferase compare
MPMX19_06044 -0.5 -1.1 hypothetical protein compare
MPMX19_05906 -0.5 -1.1 hypothetical protein compare
MPMX19_02658 -0.5 -4.0 Glutamate synthase [NADPH] small chain compare
MPMX19_03618 -0.5 -2.6 hypothetical protein compare
MPMX19_02303 -0.5 -1.3 hypothetical protein compare
MPMX19_02927 -0.5 -1.7 5,6,7,8-tetrahydromethanopterin hydro-lyase compare
MPMX19_02484 -0.5 -1.4 Heat-inducible transcription repressor HrcA compare
MPMX19_00695 -0.5 -1.4 putative transcriptional regulatory protein compare
MPMX19_04225 -0.5 -2.2 hypothetical protein compare
MPMX19_05931 -0.5 -2.7 Lysine 6-dehydrogenase compare
MPMX19_04623 -0.5 -2.1 hypothetical protein compare
MPMX19_01349 -0.5 -3.6 hypothetical protein compare
MPMX19_04409 -0.5 -1.7 hypothetical protein compare
MPMX19_01796 -0.5 -1.1 hypothetical protein compare
MPMX19_02700 -0.5 -1.5 hypothetical protein compare
MPMX19_01486 -0.5 -3.3 Flagellar L-ring protein compare
MPMX19_00714 -0.5 -2.5 Ferrous-iron efflux pump FieF compare
MPMX19_00204 -0.5 -1.7 hypothetical protein compare
MPMX19_03117 -0.5 -2.7 Catabolite control protein A compare
MPMX19_02004 -0.5 -3.3 hypothetical protein compare
MPMX19_04724 -0.5 -1.6 hypothetical protein compare
MPMX19_06815 -0.5 -0.9 hypothetical protein compare
MPMX19_05586 -0.5 -0.8 hypothetical protein compare
MPMX19_01249 -0.5 -0.8 Periplasmic serine endoprotease DegP compare
MPMX19_05838 -0.5 -2.5 hypothetical protein compare
MPMX19_04355 -0.5 -2.8 Vitamin B12 import ATP-binding protein BtuD compare
MPMX19_00996 -0.5 -1.6 Metalloprotease MmpA compare
MPMX19_03011 -0.5 -1.6 hypothetical protein compare
MPMX19_06521 -0.5 -2.2 Putative aliphatic sulfonates-binding protein compare
MPMX19_01054 -0.5 -2.0 Aspartate carbamoyltransferase compare
MPMX19_02736 -0.5 -3.3 Tryptophan synthase beta chain compare
MPMX19_00572 -0.5 -1.6 Type-4 uracil-DNA glycosylase compare
MPMX19_05119 -0.5 -3.5 Glucose-6-phosphate 1-dehydrogenase compare
MPMX19_04668 -0.5 -1.3 HTH-type transcriptional regulator DmlR compare
MPMX19_04958 -0.5 -0.9 Methyl-accepting chemotaxis protein compare
MPMX19_03446 -0.5 -2.3 hypothetical protein compare
MPMX19_00297 -0.5 -0.9 4-carboxy-4-hydroxy-2-oxoadipate aldolase compare
MPMX19_01480 -0.5 -1.7 hypothetical protein compare
MPMX19_01998 -0.5 -2.2 3-isopropylmalate dehydratase large subunit compare
MPMX19_06954 -0.5 -1.4 hypothetical protein compare
MPMX19_05387 -0.5 -1.3 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
MPMX19_01652 -0.5 -1.4 hypothetical protein compare
MPMX19_05070 -0.5 -2.1 hypothetical protein compare
MPMX19_02300 -0.5 -1.4 Transcription elongation factor GreA compare
MPMX19_03798 -0.5 -1.4 hypothetical protein compare
MPMX19_01585 -0.5 -1.3 Zinc uptake regulation protein compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm; low oxygen experiments