Experiment set1S74 for Azospirillum sp. SherDot2

Compare to:

NL-CCM; low oxygen

200 most detrimental genes:

  gene name fitness t score description  
MPMX19_00166 +1.2 3.2 hypothetical protein compare
MPMX19_01864 +0.9 1.9 Regulatory protein AtoC compare
MPMX19_02136 +0.8 1.8 Phage shock protein A compare
MPMX19_04087 +0.8 2.9 Flagellum site-determining protein YlxH compare
MPMX19_06106 +0.8 4.4 Bacteriohemerythrin compare
MPMX19_01073 +0.8 2.7 5'-nucleotidase compare
MPMX19_00725 +0.8 4.8 Transcriptional regulatory protein ros compare
MPMX19_01012 +0.8 2.4 Cyclic pyranopterin monophosphate synthase compare
MPMX19_03846 +0.7 2.5 hypothetical protein compare
MPMX19_04913 +0.7 1.9 hypothetical protein compare
MPMX19_05652 +0.7 2.2 hypothetical protein compare
MPMX19_00414 +0.7 1.6 Pyruvate dehydrogenase complex repressor compare
MPMX19_04825 +0.7 2.0 hypothetical protein compare
MPMX19_00266 +0.7 2.3 hypothetical protein compare
MPMX19_03298 +0.7 2.1 hypothetical protein compare
MPMX19_03014 +0.7 3.8 Transcriptional activatory protein AadR compare
MPMX19_00240 +0.7 2.1 hypothetical protein compare
MPMX19_00258 +0.7 2.4 Protein ImuB compare
MPMX19_01235 +0.7 1.6 hypothetical protein compare
MPMX19_05193 +0.7 1.7 Taurine-binding periplasmic protein compare
MPMX19_04551 +0.7 1.4 HTH-type transcriptional repressor RspR compare
MPMX19_06042 +0.7 3.9 hypothetical protein compare
MPMX19_05551 +0.7 1.9 Chemotaxis protein CheY compare
MPMX19_04323 +0.7 2.2 Segregation and condensation protein B compare
MPMX19_00190 +0.6 2.6 hypothetical protein compare
MPMX19_02772 +0.6 2.2 N-acetylcysteine deacetylase compare
MPMX19_06272 +0.6 1.2 hypothetical protein compare
MPMX19_03195 +0.6 1.0 hypothetical protein compare
MPMX19_01766 +0.6 3.6 Phosphate-specific transport system accessory protein PhoU compare
MPMX19_06648 +0.6 3.4 hypothetical protein compare
MPMX19_00813 +0.6 1.7 HTH-type transcriptional regulator CysL compare
MPMX19_02865 +0.6 2.2 hypothetical protein compare
MPMX19_03768 +0.6 2.1 hypothetical protein compare
MPMX19_05534 +0.6 1.7 DNA gyrase inhibitor YacG compare
MPMX19_00362 +0.6 2.3 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_02218 +0.6 1.1 hypothetical protein compare
MPMX19_06874 +0.6 1.5 hypothetical protein compare
MPMX19_06610 +0.6 1.5 hypothetical protein compare
MPMX19_00840 +0.6 2.5 Pyridoxine 5'-phosphate synthase compare
MPMX19_00719 +0.6 2.7 Protein ElaA compare
MPMX19_00649 +0.6 2.8 Phosphoadenosine phosphosulfate reductase compare
MPMX19_06519 +0.6 1.3 HTH-type transcriptional repressor NagR compare
MPMX19_00475 +0.6 1.6 hypothetical protein compare
MPMX19_02768 +0.6 1.7 Ribose operon repressor compare
MPMX19_00918 +0.6 2.8 hypothetical protein compare
MPMX19_04458 +0.6 2.3 2-hydroxy-3-oxopropionate reductase compare
MPMX19_06422 +0.6 2.3 hypothetical protein compare
MPMX19_05203 +0.6 1.9 hypothetical protein compare
MPMX19_06770 +0.6 3.1 NAD-dependent glycerol dehydrogenase compare
MPMX19_06795 +0.6 1.6 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase compare
MPMX19_06297 +0.5 1.0 hypothetical protein compare
MPMX19_01596 +0.5 2.4 hypothetical protein compare
MPMX19_03212 +0.5 1.5 hypothetical protein compare
MPMX19_01618 +0.5 4.2 hypothetical protein compare
MPMX19_05896 +0.5 1.4 hypothetical protein compare
MPMX19_05205 +0.5 2.0 hypothetical protein compare
MPMX19_01789 +0.5 1.9 Urease subunit beta compare
MPMX19_05068 +0.5 1.5 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA compare
MPMX19_05813 +0.5 1.8 2-hydroxy-3-oxopropionate reductase compare
MPMX19_05454 +0.5 1.4 hypothetical protein compare
MPMX19_00898 +0.5 3.1 hypothetical protein compare
MPMX19_06912 +0.5 3.2 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_05470 +0.5 2.0 hypothetical protein compare
MPMX19_03937 +0.5 2.0 Acyl-CoA dehydrogenase compare
MPMX19_00788 +0.5 2.4 Chemotaxis protein CheY compare
MPMX19_06924 +0.5 1.9 hypothetical protein compare
MPMX19_00577 +0.5 2.3 Ribosomal RNA small subunit methyltransferase E compare
MPMX19_04085 +0.5 1.7 hypothetical protein compare
MPMX19_01645 +0.5 1.4 HTH-type transcriptional regulator GltC compare
MPMX19_04759 +0.5 1.3 HTH-type transcriptional regulator LutR compare
MPMX19_05254 +0.5 1.0 Carbon monoxide dehydrogenase small chain compare
MPMX19_04682 +0.5 1.1 hypothetical protein compare
MPMX19_02608 +0.5 2.0 hypothetical protein compare
MPMX19_02580 +0.5 1.6 Acetyltransferase compare
MPMX19_00206 +0.5 3.4 Cytochrome c oxidase subunit 1, bacteroid compare
MPMX19_05442 +0.5 1.5 Ribosomal large subunit pseudouridine synthase D compare
MPMX19_01261 +0.5 3.6 Regulator of RpoS compare
MPMX19_00957 +0.5 2.4 Phosphoribosyl-ATP pyrophosphatase compare
MPMX19_06759 +0.5 1.4 Taurine import ATP-binding protein TauB compare
MPMX19_02415 +0.5 2.1 Transcriptional regulatory protein WalR compare
MPMX19_03724 +0.5 0.8 hypothetical protein compare
MPMX19_01875 +0.5 2.0 hypothetical protein compare
MPMX19_02801 +0.5 1.1 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_05607 +0.5 2.2 Sensor histidine kinase RcsC compare
MPMX19_01355 +0.5 3.7 hypothetical protein compare
MPMX19_06746 +0.5 0.7 Chemotaxis protein CheW compare
MPMX19_03305 +0.5 1.8 L-fucose mutarotase compare
MPMX19_05364 +0.5 2.4 Acetate CoA-transferase subunit beta compare
MPMX19_02466 +0.5 1.2 Octopine permease ATP-binding protein P compare
MPMX19_00423 +0.5 2.1 (E)-2-((N-methylformamido)methylene)succinate hydrolase compare
MPMX19_04700 +0.4 1.7 Adaptive-response sensory-kinase SasA compare
MPMX19_02248 +0.4 1.9 hypothetical protein compare
MPMX19_04743 +0.4 1.6 Formyltransferase/hydrolase complex subunit D compare
MPMX19_02094 +0.4 1.9 hypothetical protein compare
MPMX19_04324 +0.4 2.1 Segregation and condensation protein A compare
MPMX19_05393 +0.4 1.4 hypothetical protein compare
MPMX19_03547 +0.4 2.2 putative oxidoreductase compare
MPMX19_04099 +0.4 1.6 Chemotaxis protein CheY compare
MPMX19_06691 +0.4 1.3 hypothetical protein compare
MPMX19_06763 +0.4 1.7 hypothetical protein compare
MPMX19_04154 +0.4 1.9 hypothetical protein compare
MPMX19_05034 +0.4 1.4 ATP synthase subunit c compare
MPMX19_02091 +0.4 1.7 hypothetical protein compare
MPMX19_06420 +0.4 1.8 hypothetical protein compare
MPMX19_04549 +0.4 1.9 L-cystine-binding protein FliY compare
MPMX19_04518 +0.4 2.0 Acetyl-CoA:oxalate CoA-transferase compare
MPMX19_04435 +0.4 2.9 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX19_04161 +0.4 1.3 hypothetical protein compare
MPMX19_02586 +0.4 2.9 Phosphate import ATP-binding protein PstB compare
MPMX19_04731 +0.4 2.1 hypothetical protein compare
MPMX19_02266 +0.4 1.9 hypothetical protein compare
MPMX19_01059 +0.4 0.8 hypothetical protein compare
MPMX19_06929 +0.4 1.7 hypothetical protein compare
MPMX19_00247 +0.4 2.1 Ferric uptake regulation protein compare
MPMX19_06193 +0.4 1.1 Flagellar hook-basal body complex protein FliE compare
MPMX19_03472 +0.4 1.2 Fatty acid metabolism regulator protein compare
MPMX19_06635 +0.4 2.9 hypothetical protein compare
MPMX19_03687 +0.4 1.9 hypothetical protein compare
MPMX19_02398 +0.4 3.1 hypothetical protein compare
MPMX19_04657 +0.4 2.7 2,3-dimethylmalate lyase compare
MPMX19_04474 +0.4 1.6 hypothetical protein compare
MPMX19_00687 +0.4 1.0 hypothetical protein compare
MPMX19_06539 +0.4 0.9 hypothetical protein compare
MPMX19_01870 +0.4 1.9 hypothetical protein compare
MPMX19_03123 +0.4 0.9 Citrate lyase acyl carrier protein compare
MPMX19_03596 +0.4 3.2 C4-dicarboxylate transport sensor protein DctB compare
MPMX19_03667 +0.4 1.5 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_01947 +0.4 1.4 Chemotaxis protein CheY compare
MPMX19_04509 +0.4 1.4 Spermidine/putrescine import ATP-binding protein PotA compare
MPMX19_01964 +0.4 1.2 hypothetical protein compare
MPMX19_04692 +0.4 1.4 hypothetical protein compare
MPMX19_04633 +0.4 1.3 hypothetical protein compare
MPMX19_02084 +0.4 0.7 hypothetical protein compare
MPMX19_05082 +0.4 1.5 hypothetical protein compare
MPMX19_05143 +0.4 1.0 hypothetical protein compare
MPMX19_03494 +0.4 1.8 Regulatory protein AtoC compare
MPMX19_01978 +0.4 0.9 hypothetical protein compare
MPMX19_06141 +0.4 1.5 Intermembrane phospholipid transport system permease protein MlaE compare
MPMX19_06396 +0.4 2.1 hypothetical protein compare
MPMX19_02559 +0.4 1.3 7-methyl-GTP pyrophosphatase compare
MPMX19_06981 +0.4 1.4 hypothetical protein compare
MPMX19_04677 +0.4 1.7 Sulfate/thiosulfate import ATP-binding protein CysA compare
MPMX19_02817 +0.4 1.3 Serine 3-dehydrogenase compare
MPMX19_00960 +0.4 2.8 hypothetical protein compare
MPMX19_00429 +0.4 1.6 hypothetical protein compare
MPMX19_00191 +0.4 1.5 hypothetical protein compare
MPMX19_02532 +0.4 1.2 Cytochrome c-type biogenesis protein CcmE compare
MPMX19_03141 +0.4 1.2 hypothetical protein compare
MPMX19_04390 +0.4 1.2 hypothetical protein compare
MPMX19_02120 +0.4 1.0 hypothetical protein compare
MPMX19_06510 +0.4 1.2 Aliphatic sulfonates import ATP-binding protein SsuB compare
MPMX19_01958 +0.4 2.9 Protein-glutamate methylesterase/protein-glutamine glutaminase compare
MPMX19_06453 +0.4 2.0 hypothetical protein compare
MPMX19_05718 +0.4 2.4 hypothetical protein compare
MPMX19_00492 +0.4 1.7 Cobalamin biosynthesis protein CbiB compare
MPMX19_00268 +0.4 1.1 Transcriptional regulatory protein OmpR compare
MPMX19_02583 +0.4 3.4 Protein SphX compare
MPMX19_03631 +0.4 0.7 hypothetical protein compare
MPMX19_00335 +0.4 1.0 Magnesium transport protein CorA compare
MPMX19_02069 +0.4 1.7 hypothetical protein compare
MPMX19_04876 +0.4 1.8 hypothetical protein compare
MPMX19_03800 +0.4 1.2 hypothetical protein compare
MPMX19_01866 +0.4 1.3 Sulfur carrier protein CysO compare
MPMX19_04100 +0.4 1.3 hypothetical protein compare
MPMX19_01613 +0.4 1.3 hypothetical protein compare
MPMX19_04693 +0.4 1.7 hypothetical protein compare
MPMX19_00708 +0.4 2.9 hypothetical protein compare
MPMX19_02278 +0.4 2.3 hypothetical protein compare
MPMX19_05930 +0.4 1.2 Dipeptidyl-peptidase 6 compare
MPMX19_06121 +0.4 2.0 hypothetical protein compare
MPMX19_03250 +0.4 1.9 Glycine cleavage system transcriptional activator compare
MPMX19_02254 +0.4 1.6 hypothetical protein compare
MPMX19_06750 +0.4 1.3 Aliphatic sulfonates import ATP-binding protein SsuB compare
MPMX19_04766 +0.4 1.4 Glycine cleavage system transcriptional activator compare
MPMX19_01490 +0.4 2.0 hypothetical protein compare
MPMX19_00923 +0.4 1.0 hypothetical protein compare
MPMX19_01067 +0.4 0.8 hypothetical protein compare
MPMX19_06326 +0.4 1.0 hypothetical protein compare
MPMX19_06112 +0.3 1.4 hypothetical protein compare
MPMX19_05047 +0.3 1.8 Glycine cleavage system transcriptional activator compare
MPMX19_03769 +0.3 2.0 hypothetical protein compare
MPMX19_06889 +0.3 1.7 Dimethyl sulfoxide/trimethylamine N-oxide reductase compare
MPMX19_02063 +0.3 1.4 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_02127 +0.3 2.2 hypothetical protein compare
MPMX19_03620 +0.3 1.4 hypothetical protein compare
MPMX19_05233 +0.3 2.1 Glycine betaine/proline betaine transport system ATP-binding protein ProV compare
MPMX19_00239 +0.3 2.4 putative adenylyltransferase/sulfurtransferase MoeZ compare
MPMX19_05050 +0.3 2.8 Inner membrane ABC transporter ATP-binding protein YddA compare
MPMX19_00875 +0.3 1.1 hypothetical protein compare
MPMX19_02149 +0.3 1.2 hypothetical protein compare
MPMX19_00472 +0.3 0.7 Protein HesB, heterocyst compare
MPMX19_04795 +0.3 1.5 hypothetical protein compare
MPMX19_05018 +0.3 2.6 HTH-type transcriptional regulator RamB compare
MPMX19_06911 +0.3 1.4 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_00540 +0.3 2.0 Tungstate-binding protein TupA compare
MPMX19_06979 +0.3 0.9 hypothetical protein compare
MPMX19_04098 +0.3 1.8 Sensor histidine kinase RcsC compare
MPMX19_02058 +0.3 1.0 hypothetical protein compare
MPMX19_02660 +0.3 1.5 Inner membrane protein YbjJ compare
MPMX19_06620 +0.3 2.4 dTDP-4-dehydrorhamnose 3,5-epimerase compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm; low oxygen experiments