Experiment set1S73 for Azospirillum sp. SherDot2

Compare to:

NL-CCM; low oxygen

200 most important genes:

  gene name fitness t score description  
MPMX19_02267 -2.3 -1.6 hypothetical protein compare
MPMX19_00260 -2.0 -2.9 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_06102 -1.9 -4.1 Membrane-bound lytic murein transglycosylase C compare
MPMX19_02303 -1.8 -3.5 hypothetical protein compare
MPMX19_01883 -1.7 -7.4 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_06539 -1.6 -1.8 hypothetical protein compare
MPMX19_03734 -1.5 -2.0 RutC family protein YjgH compare
MPMX19_00705 -1.5 -3.2 Cell division coordinator CpoB compare
MPMX19_02538 -1.5 -2.6 hypothetical protein compare
MPMX19_05044 -1.5 -2.5 hypothetical protein compare
MPMX19_05680 -1.4 -3.6 Cell cycle response regulator CtrA compare
MPMX19_00126 -1.4 -3.3 hypothetical protein compare
MPMX19_02136 -1.4 -1.7 Phage shock protein A compare
MPMX19_00304 -1.4 -3.1 Phosphatidylcholine synthase compare
MPMX19_05896 -1.3 -2.2 hypothetical protein compare
MPMX19_00838 -1.3 -2.9 GTP pyrophosphokinase rsh compare
MPMX19_00718 -1.3 -2.3 hypothetical protein compare
MPMX19_06677 -1.3 -2.9 hypothetical protein compare
MPMX19_01796 -1.2 -2.1 hypothetical protein compare
MPMX19_04079 -1.2 -2.1 hypothetical protein compare
MPMX19_04010 -1.2 -2.6 Isoaspartyl peptidase compare
MPMX19_02268 -1.2 -3.4 hypothetical protein compare
MPMX19_00478 -1.2 -2.0 putative protein RP812 compare
MPMX19_01939 -1.1 -3.6 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
MPMX19_01499 -1.1 -3.2 hypothetical protein compare
MPMX19_01884 -1.1 -2.5 Phosphoribosylformylglycinamidine synthase subunit PurQ compare
MPMX19_03654 -1.1 -2.5 Fructokinase compare
MPMX19_00061 -1.1 -2.7 L-lysine 2,3-aminomutase compare
MPMX19_00933 -1.1 -3.0 hypothetical protein compare
MPMX19_00794 -1.1 -3.1 Transcriptional activator protein CopR compare
MPMX19_02613 -1.1 -2.4 hypothetical protein compare
MPMX19_00976 -1.0 -1.8 ATP-dependent RNA helicase RhlE compare
MPMX19_04963 -1.0 -1.9 Cysteine desulfurase IscS compare
MPMX19_02207 -1.0 -2.7 N-(5'-phosphoribosyl)anthranilate isomerase compare
MPMX19_03492 -1.0 -2.6 3'-5' exonuclease DinG compare
MPMX19_03693 -1.0 -2.6 hypothetical protein compare
MPMX19_03389 -1.0 -2.6 Carbon monoxide dehydrogenase small chain compare
MPMX19_02177 -1.0 -2.9 Succinylornithine transaminase/acetylornithine aminotransferase compare
MPMX19_01718 -0.9 -1.9 Ribosomal large subunit pseudouridine synthase C compare
MPMX19_01247 -0.9 -1.6 Transcriptional regulatory protein DegU compare
MPMX19_06934 -0.9 -3.0 Manganese transport system membrane protein MntB compare
MPMX19_00128 -0.9 -6.5 hypothetical protein compare
MPMX19_02737 -0.9 -4.5 Tryptophan synthase alpha chain compare
MPMX19_06272 -0.9 -0.6 hypothetical protein compare
MPMX19_06179 -0.9 -1.6 putative SURF1-like protein compare
MPMX19_04218 -0.9 -4.0 Protein phosphatase PrpC compare
MPMX19_04968 -0.9 -1.8 hypothetical protein compare
MPMX19_06789 -0.9 -2.0 Octopine catabolism/uptake operon regulatory protein OccR compare
MPMX19_02484 -0.9 -2.3 Heat-inducible transcription repressor HrcA compare
MPMX19_06236 -0.9 -2.5 hypothetical protein compare
MPMX19_03251 -0.9 -3.1 hypothetical protein compare
MPMX19_02703 -0.9 -1.6 hypothetical protein compare
MPMX19_02234 -0.9 -3.4 hypothetical protein compare
MPMX19_00122 -0.8 -2.5 hypothetical protein compare
MPMX19_06334 -0.8 -2.2 Arsenite oxidase subunit AioB compare
MPMX19_01149 -0.8 -3.9 Polyphosphate kinase compare
MPMX19_05687 -0.8 -3.4 Chemotaxis protein CheW compare
MPMX19_05997 -0.8 -2.0 hypothetical protein compare
MPMX19_02424 -0.8 -2.1 hypothetical protein compare
MPMX19_03806 -0.8 -2.4 hypothetical protein compare
MPMX19_01304 -0.8 -5.4 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX19_02320 -0.8 -1.5 HTH-type transcriptional regulator GltR compare
MPMX19_00904 -0.8 -4.5 DNA repair protein RadA compare
MPMX19_03558 -0.8 -1.7 hypothetical protein compare
MPMX19_02796 -0.8 -2.5 Methanogen homoaconitase small subunit compare
MPMX19_06723 -0.8 -2.4 hypothetical protein compare
MPMX19_01249 -0.8 -1.2 Periplasmic serine endoprotease DegP compare
MPMX19_04362 -0.8 -1.3 Cytidine deaminase compare
MPMX19_01748 -0.8 -1.6 hypothetical protein compare
MPMX19_04276 -0.8 -1.1 hypothetical protein compare
MPMX19_03085 -0.8 -1.8 Hydrogen peroxide-inducible genes activator compare
MPMX19_03788 -0.8 -3.0 hypothetical protein compare
MPMX19_00025 -0.7 -1.4 hypothetical protein compare
MPMX19_01014 -0.7 -2.8 Indole-3-glycerol phosphate synthase compare
MPMX19_05095 -0.7 -1.7 Toxin YoeB compare
MPMX19_04692 -0.7 -2.2 hypothetical protein compare
MPMX19_00846 -0.7 -1.4 hypothetical protein compare
MPMX19_03599 -0.7 -3.0 2-amino-5-chloromuconic acid deaminase compare
MPMX19_04958 -0.7 -2.0 Methyl-accepting chemotaxis protein compare
MPMX19_03874 -0.7 -2.3 hypothetical protein compare
MPMX19_04430 -0.7 -2.4 hypothetical protein compare
MPMX19_02460 -0.7 -6.4 Motility protein A compare
MPMX19_03420 -0.7 -1.7 hypothetical protein compare
MPMX19_06337 -0.7 -2.2 Arsenic resistance transcriptional regulator ArsR1 compare
MPMX19_03193 -0.7 -3.1 hypothetical protein compare
MPMX19_04208 -0.7 -2.2 flagellum biosynthesis repressor protein FlbT compare
MPMX19_02850 -0.7 -1.7 Glyceraldehyde-3-phosphate dehydrogenase 1 compare
MPMX19_01937 -0.7 -4.9 hypothetical protein compare
MPMX19_04284 -0.7 -2.1 hypothetical protein compare
MPMX19_03653 -0.7 -3.2 Mannitol 2-dehydrogenase compare
MPMX19_04903 -0.7 -2.1 hypothetical protein compare
MPMX19_04100 -0.7 -1.9 hypothetical protein compare
MPMX19_03213 -0.7 -2.1 hypothetical protein compare
MPMX19_01243 -0.7 -1.2 hypothetical protein compare
MPMX19_03609 -0.7 -1.7 HTH-type transcriptional repressor NagR compare
MPMX19_06916 -0.7 -1.5 Crotonyl-CoA hydratase compare
MPMX19_02579 -0.7 -1.7 hypothetical protein compare
MPMX19_01777 -0.7 -1.8 2-aminoadipate transaminase compare
MPMX19_00906 -0.7 -4.9 Amidophosphoribosyltransferase compare
MPMX19_06235 -0.7 -1.9 Glycine cleavage system transcriptional activator compare
MPMX19_04289 -0.7 -3.6 hypothetical protein compare
MPMX19_06560 -0.7 -2.6 hypothetical protein compare
MPMX19_01353 -0.7 -1.6 hypothetical protein compare
MPMX19_03369 -0.7 -1.0 hypothetical protein compare
MPMX19_00262 -0.6 -1.3 Thiazole synthase compare
MPMX19_06522 -0.6 -2.2 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_04326 -0.6 -2.3 Beta-hexosaminidase compare
MPMX19_04210 -0.6 -1.6 hypothetical protein compare
MPMX19_05294 -0.6 -2.5 hypothetical protein compare
MPMX19_01704 -0.6 -1.5 hypothetical protein compare
MPMX19_05119 -0.6 -4.7 Glucose-6-phosphate 1-dehydrogenase compare
MPMX19_04171 -0.6 -1.4 16S ribosomal RNA compare
MPMX19_01714 -0.6 -1.1 tRNA-modifying protein YgfZ compare
MPMX19_06969 -0.6 -1.7 hypothetical protein compare
MPMX19_02980 -0.6 -1.2 Hydrogen cyanide synthase subunit HcnA compare
MPMX19_04835 -0.6 -1.6 hypothetical protein compare
MPMX19_05915 -0.6 -1.7 Flagellar M-ring protein compare
MPMX19_00714 -0.6 -3.1 Ferrous-iron efflux pump FieF compare
MPMX19_00695 -0.6 -1.7 putative transcriptional regulatory protein compare
MPMX19_02905 -0.6 -1.8 hypothetical protein compare
MPMX19_02646 -0.6 -1.7 hypothetical protein compare
MPMX19_05679 -0.6 -4.1 Flagellum-specific ATP synthase compare
MPMX19_03760 -0.6 -1.5 Ribose import binding protein RbsB compare
MPMX19_06878 -0.6 -1.8 Putative amino-acid ABC transporter-binding protein YhdW compare
MPMX19_03507 -0.6 -2.8 hypothetical protein compare
MPMX19_05678 -0.6 -3.4 hypothetical protein compare
MPMX19_05930 -0.6 -1.7 Dipeptidyl-peptidase 6 compare
MPMX19_05727 -0.6 -3.2 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX19_05553 -0.6 -1.7 hypothetical protein compare
MPMX19_01486 -0.6 -3.2 Flagellar L-ring protein compare
MPMX19_04683 -0.6 -1.4 Acylamidase compare
MPMX19_01482 -0.6 -4.4 hypothetical protein compare
MPMX19_05387 -0.6 -1.6 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
MPMX19_01426 -0.6 -1.1 hypothetical protein compare
MPMX19_02657 -0.6 -5.3 Glutamate synthase [NADPH] large chain compare
MPMX19_00607 -0.6 -4.2 3-isopropylmalate dehydrogenase compare
MPMX19_02736 -0.6 -4.1 Tryptophan synthase beta chain compare
MPMX19_01493 -0.6 -1.2 Flagellar assembly protein FliX compare
MPMX19_01894 -0.6 -3.1 hypothetical protein compare
MPMX19_00089 -0.6 -1.6 hypothetical protein compare
MPMX19_05224 -0.6 -1.8 hypothetical protein compare
MPMX19_03069 -0.6 -0.9 hypothetical protein compare
MPMX19_06266 -0.6 -1.0 hypothetical protein compare
MPMX19_05014 -0.6 -1.3 Cytochrome c1 compare
MPMX19_05355 -0.6 -1.6 Transcriptional regulator SlyA compare
MPMX19_05067 -0.6 -1.2 hypothetical protein compare
MPMX19_00868 -0.6 -5.1 Sensor kinase CckA compare
MPMX19_06761 -0.6 -2.6 HTH-type transcriptional regulator TauR compare
MPMX19_02658 -0.6 -4.4 Glutamate synthase [NADPH] small chain compare
MPMX19_02202 -0.6 -1.4 hypothetical protein compare
MPMX19_01936 -0.6 -4.4 hypothetical protein compare
MPMX19_05618 -0.6 -1.7 putative manganese efflux pump MntP compare
MPMX19_05432 -0.6 -1.9 hypothetical protein compare
MPMX19_06700 -0.6 -1.2 Copper-sensing transcriptional repressor RicR compare
MPMX19_03747 -0.6 -1.9 Potassium-transporting ATPase KdpC subunit compare
MPMX19_00163 -0.6 -2.5 hypothetical protein compare
MPMX19_00530 -0.6 -1.5 Orotate phosphoribosyltransferase compare
MPMX19_04391 -0.6 -3.1 Homoserine O-acetyltransferase compare
MPMX19_06880 -0.6 -1.2 Validamycin A dioxygenase compare
MPMX19_01911 -0.5 -4.0 Acetoacetyl-CoA reductase compare
MPMX19_01054 -0.5 -2.3 Aspartate carbamoyltransferase compare
MPMX19_05684 -0.5 -3.2 Chemotaxis protein methyltransferase 1 compare
MPMX19_01605 -0.5 -3.4 Chemotaxis protein CheY compare
MPMX19_06116 -0.5 -1.8 putative ribonucleotide transport ATP-binding protein mkl compare
MPMX19_01565 -0.5 -1.4 hypothetical protein compare
MPMX19_03439 -0.5 -1.0 hypothetical protein compare
MPMX19_00977 -0.5 -2.4 hypothetical protein compare
MPMX19_03281 -0.5 -1.6 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_06933 -0.5 -1.0 Manganese transport system ATP-binding protein MntB compare
MPMX19_03435 -0.5 -1.6 hypothetical protein compare
MPMX19_03586 -0.5 -1.4 HTH-type transcriptional repressor ComR compare
MPMX19_05458 -0.5 -1.4 hypothetical protein compare
MPMX19_06009 -0.5 -1.5 hypothetical protein compare
MPMX19_04869 -0.5 -1.8 DNA polymerase I compare
MPMX19_06490 -0.5 -1.1 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_02981 -0.5 -2.3 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_06464 -0.5 -1.6 Tryptophan synthase beta chain compare
MPMX19_00860 -0.5 -1.6 hypothetical protein compare
MPMX19_03295 -0.5 -1.4 HTH-type transcriptional regulator McbR compare
MPMX19_00795 -0.5 -2.2 Adaptive-response sensory-kinase SasA compare
MPMX19_00841 -0.5 -1.0 Holo-[acyl-carrier-protein] synthase compare
MPMX19_04282 -0.5 -2.5 hypothetical protein compare
MPMX19_03694 -0.5 -0.8 hypothetical protein compare
MPMX19_01630 -0.5 -1.8 Phosphoribosylamine--glycine ligase compare
MPMX19_01597 -0.5 -1.1 23S rRNA (uridine(2479)-2'-O)-methyltransferase compare
MPMX19_06786 -0.5 -1.6 Formate dehydrogenase, mitochondrial compare
MPMX19_03608 -0.5 -2.0 N-acetylmuramic acid 6-phosphate etherase compare
MPMX19_04622 -0.5 -3.3 hypothetical protein compare
MPMX19_04701 -0.5 -1.1 Transcriptional regulatory protein FixJ compare
MPMX19_04730 -0.5 -2.0 Transcription elongation factor GreB compare
MPMX19_01085 -0.5 -2.2 hypothetical protein compare
MPMX19_06736 -0.5 -1.9 hypothetical protein compare
MPMX19_06905 -0.5 -3.1 Transcriptional repressor IclR compare
MPMX19_06144 -0.5 -1.5 hypothetical protein compare
MPMX19_06535 -0.5 -1.7 hypothetical protein compare
MPMX19_06914 -0.5 -1.0 Acyl-CoA dehydrogenase FadE27 compare
MPMX19_01349 -0.5 -3.3 hypothetical protein compare
MPMX19_03965 -0.5 -4.5 Poly(3-hydroxyalkanoate) polymerase subunit PhaC compare
MPMX19_01115 -0.5 -3.2 Phosphoglycolate phosphatase compare
MPMX19_02668 -0.5 -3.3 RNA polymerase sigma-54 factor 2 compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm; low oxygen experiments