Experiment set1S73 for Azospirillum sp. SherDot2

Compare to:

NL-CCM; low oxygen

200 most detrimental genes:

  gene name fitness t score description  
MPMX19_01875 +1.1 5.0 hypothetical protein compare
MPMX19_04913 +1.1 3.2 hypothetical protein compare
MPMX19_03195 +1.0 2.7 hypothetical protein compare
MPMX19_04743 +0.9 3.7 Formyltransferase/hydrolase complex subunit D compare
MPMX19_00208 +0.9 2.7 hypothetical protein compare
MPMX19_04551 +0.9 2.3 HTH-type transcriptional repressor RspR compare
MPMX19_02816 +0.9 1.9 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_01766 +0.9 5.3 Phosphate-specific transport system accessory protein PhoU compare
MPMX19_06488 +0.8 1.6 Taurine-binding periplasmic protein compare
MPMX19_01454 +0.8 2.4 hypothetical protein compare
MPMX19_05034 +0.8 2.9 ATP synthase subunit c compare
MPMX19_01864 +0.8 1.9 Regulatory protein AtoC compare
MPMX19_03109 +0.7 3.1 hypothetical protein compare
MPMX19_05176 +0.7 2.0 4-hydroxy-3-prenylphenylpyruvate oxygenase/4-hydroxy-3-prenylbenzoate synthase compare
MPMX19_02937 +0.7 1.9 hypothetical protein compare
MPMX19_03595 +0.7 5.0 C4-dicarboxylate transport protein 2 compare
MPMX19_00687 +0.7 1.7 hypothetical protein compare
MPMX19_03169 +0.7 2.1 Dihydroanticapsin 7-dehydrogenase compare
MPMX19_06197 +0.7 1.6 hypothetical protein compare
MPMX19_05656 +0.7 1.8 HTH-type transcriptional activator RhaR compare
MPMX19_05430 +0.7 2.0 HTH-type transcriptional regulator DmlR compare
MPMX19_04680 +0.7 2.5 Inner membrane ABC transporter permease protein YdcV compare
MPMX19_06297 +0.7 1.2 hypothetical protein compare
MPMX19_00725 +0.6 3.8 Transcriptional regulatory protein ros compare
MPMX19_05599 +0.6 2.5 hypothetical protein compare
MPMX19_05442 +0.6 2.0 Ribosomal large subunit pseudouridine synthase D compare
MPMX19_03728 +0.6 1.5 hypothetical protein compare
MPMX19_06765 +0.6 1.4 Hydrogen peroxide-inducible genes activator compare
MPMX19_06770 +0.6 3.4 NAD-dependent glycerol dehydrogenase compare
MPMX19_02536 +0.6 1.8 hypothetical protein compare
MPMX19_00206 +0.6 4.4 Cytochrome c oxidase subunit 1, bacteroid compare
MPMX19_06635 +0.6 4.5 hypothetical protein compare
MPMX19_04267 +0.6 2.7 hypothetical protein compare
MPMX19_00475 +0.6 1.6 hypothetical protein compare
MPMX19_01918 +0.6 1.2 tRNA-Ala compare
MPMX19_03934 +0.6 1.8 hypothetical protein compare
MPMX19_02248 +0.6 2.4 hypothetical protein compare
MPMX19_06042 +0.6 2.8 hypothetical protein compare
MPMX19_05295 +0.5 1.8 hypothetical protein compare
MPMX19_00020 +0.5 1.2 hypothetical protein compare
MPMX19_00788 +0.5 2.2 Chemotaxis protein CheY compare
MPMX19_05581 +0.5 1.1 hypothetical protein compare
MPMX19_03631 +0.5 1.2 hypothetical protein compare
MPMX19_02609 +0.5 2.7 tRNA-Gly compare
MPMX19_05043 +0.5 2.8 hypothetical protein compare
MPMX19_06888 +0.5 2.1 hypothetical protein compare
MPMX19_05254 +0.5 1.2 Carbon monoxide dehydrogenase small chain compare
MPMX19_05068 +0.5 1.8 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA compare
MPMX19_02198 +0.5 2.1 hypothetical protein compare
MPMX19_03594 +0.5 3.1 Aspartate ammonia-lyase compare
MPMX19_04560 +0.5 1.7 hypothetical protein compare
MPMX19_01491 +0.5 0.8 hypothetical protein compare
MPMX19_04975 +0.5 2.2 hypothetical protein compare
MPMX19_03329 +0.5 1.7 hypothetical protein compare
MPMX19_02581 +0.5 2.5 HTH-type transcriptional regulator SutR compare
MPMX19_04095 +0.5 2.0 hypothetical protein compare
MPMX19_06773 +0.5 2.0 2-(R)-hydroxypropyl-CoM dehydrogenase compare
MPMX19_03727 +0.5 2.8 hypothetical protein compare
MPMX19_06353 +0.5 1.1 hypothetical protein compare
MPMX19_03699 +0.5 1.4 Maltose/maltodextrin import ATP-binding protein MalK compare
MPMX19_04271 +0.5 1.7 Response regulator rcp1 compare
MPMX19_06569 +0.5 1.8 hypothetical protein compare
MPMX19_01719 +0.5 1.0 Putative fluoride ion transporter CrcB compare
MPMX19_06759 +0.5 1.5 Taurine import ATP-binding protein TauB compare
MPMX19_00064 +0.5 3.0 hypothetical protein compare
MPMX19_01261 +0.5 3.6 Regulator of RpoS compare
MPMX19_03676 +0.5 1.9 hypothetical protein compare
MPMX19_06326 +0.5 1.9 hypothetical protein compare
MPMX19_04531 +0.5 1.8 hypothetical protein compare
MPMX19_06897 +0.5 1.9 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_05178 +0.5 2.3 Alkanesulfonate monooxygenase compare
MPMX19_00134 +0.5 1.3 hypothetical protein compare
MPMX19_05850 +0.5 1.2 hypothetical protein compare
MPMX19_06385 +0.5 1.9 hypothetical protein compare
MPMX19_06776 +0.5 1.6 hypothetical protein compare
MPMX19_01978 +0.5 1.0 hypothetical protein compare
MPMX19_06866 +0.5 1.6 HTH-type transcriptional regulator NimR compare
MPMX19_00116 +0.5 2.3 Large-conductance mechanosensitive channel compare
MPMX19_04633 +0.5 1.7 hypothetical protein compare
MPMX19_02910 +0.5 2.6 hypothetical protein compare
MPMX19_06962 +0.4 1.7 hypothetical protein compare
MPMX19_01964 +0.4 0.9 hypothetical protein compare
MPMX19_02492 +0.4 1.5 hypothetical protein compare
MPMX19_00414 +0.4 1.3 Pyruvate dehydrogenase complex repressor compare
MPMX19_00046 +0.4 1.1 hypothetical protein compare
MPMX19_02611 +0.4 1.9 hypothetical protein compare
MPMX19_06194 +0.4 2.3 Flagellar basal-body rod protein FlgC compare
MPMX19_06129 +0.4 1.3 hypothetical protein compare
MPMX19_02608 +0.4 1.9 hypothetical protein compare
MPMX19_06537 +0.4 2.5 NADH-dependent FMN reductase SfnF compare
MPMX19_00822 +0.4 2.4 Divalent metal cation transporter MntH compare
MPMX19_04760 +0.4 2.2 Sialic acid TRAP transporter large permease protein SiaM compare
MPMX19_04557 +0.4 2.2 Na(+)/H(+) antiporter NhaA compare
MPMX19_05965 +0.4 2.1 Glycerol-3-phosphate regulon repressor compare
MPMX19_03868 +0.4 1.6 Xylitol-binding protein compare
MPMX19_06904 +0.4 1.2 putative tautomerase compare
MPMX19_00294 +0.4 1.7 Adaptive-response sensory-kinase SasA compare
MPMX19_00085 +0.4 1.9 hypothetical protein compare
MPMX19_06221 +0.4 2.1 L-2-keto-3-deoxyarabonate dehydratase compare
MPMX19_00544 +0.4 1.0 hypothetical protein compare
MPMX19_03096 +0.4 1.1 hypothetical protein compare
MPMX19_05652 +0.4 1.3 hypothetical protein compare
MPMX19_06930 +0.4 0.8 Sensor kinase CckA compare
MPMX19_03596 +0.4 3.3 C4-dicarboxylate transport sensor protein DctB compare
MPMX19_04568 +0.4 1.6 hypothetical protein compare
MPMX19_03287 +0.4 2.1 6-aminohexanoate-cyclic-dimer hydrolase compare
MPMX19_02787 +0.4 1.7 (R)-benzylsuccinyl-CoA dehydrogenase compare
MPMX19_04726 +0.4 1.3 Glycine betaine/choline transport system permease protein OusW compare
MPMX19_02548 +0.4 2.3 ATP-dependent protease subunit HslV compare
MPMX19_05934 +0.4 1.6 Arylesterase compare
MPMX19_01523 +0.4 1.7 Polar-differentiation response regulator DivK compare
MPMX19_00207 +0.4 2.1 hypothetical protein compare
MPMX19_06106 +0.4 2.1 Bacteriohemerythrin compare
MPMX19_03527 +0.4 1.7 hypothetical protein compare
MPMX19_01866 +0.4 1.8 Sulfur carrier protein CysO compare
MPMX19_00210 +0.4 2.0 hypothetical protein compare
MPMX19_05459 +0.4 0.7 hypothetical protein compare
MPMX19_02890 +0.4 2.1 Glucarate dehydratase compare
MPMX19_04700 +0.4 1.4 Adaptive-response sensory-kinase SasA compare
MPMX19_05586 +0.4 0.6 hypothetical protein compare
MPMX19_00669 +0.4 2.4 hypothetical protein compare
MPMX19_00244 +0.4 1.5 hypothetical protein compare
MPMX19_03250 +0.4 2.0 Glycine cleavage system transcriptional activator compare
MPMX19_03884 +0.4 1.5 hypothetical protein compare
MPMX19_06526 +0.4 1.7 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_02691 +0.4 1.9 hypothetical protein compare
MPMX19_02181 +0.4 1.3 hypothetical protein compare
MPMX19_01073 +0.4 1.2 5'-nucleotidase compare
MPMX19_06202 +0.4 1.0 hypothetical protein compare
MPMX19_02586 +0.4 2.6 Phosphate import ATP-binding protein PstB compare
MPMX19_05195 +0.4 1.5 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_00577 +0.4 1.8 Ribosomal RNA small subunit methyltransferase E compare
MPMX19_01618 +0.4 2.9 hypothetical protein compare
MPMX19_06355 +0.4 1.7 hypothetical protein compare
MPMX19_00887 +0.4 1.0 hypothetical protein compare
MPMX19_03823 +0.4 1.3 hypothetical protein compare
MPMX19_06630 +0.4 3.5 Secretory immunoglobulin A-binding protein EsiB compare
MPMX19_03757 +0.4 1.1 D-ribose pyranase compare
MPMX19_00268 +0.4 1.1 Transcriptional regulatory protein OmpR compare
MPMX19_02524 +0.4 3.0 tRNA pseudouridine synthase B compare
MPMX19_01653 +0.4 2.2 Serine acetyltransferase compare
MPMX19_01373 +0.4 1.6 hypothetical protein compare
MPMX19_04449 +0.4 0.6 Inosine-5'-monophosphate dehydrogenase compare
MPMX19_04661 +0.4 2.6 hypothetical protein compare
MPMX19_02989 +0.4 2.4 Riboflavin transport system permease protein RibX compare
MPMX19_00863 +0.4 2.1 Flagellar basal-body rod protein FlgC compare
MPMX19_05096 +0.4 1.5 L-cystine import ATP-binding protein TcyC compare
MPMX19_03421 +0.4 1.0 hypothetical protein compare
MPMX19_01438 +0.4 2.0 hypothetical protein compare
MPMX19_03296 +0.4 2.0 L-carnitine dehydrogenase compare
MPMX19_01459 +0.4 3.0 putative ABC transporter ATP-binding protein YheS compare
MPMX19_02749 +0.4 1.4 hypothetical protein compare
MPMX19_05911 +0.4 1.6 hypothetical protein compare
MPMX19_06579 +0.4 1.2 Carnitine monooxygenase oxygenase subunit compare
MPMX19_04158 +0.4 2.1 hypothetical protein compare
MPMX19_06848 +0.4 2.2 hypothetical protein compare
MPMX19_00209 +0.4 2.1 Cbb3-type cytochrome c oxidase subunit FixP compare
MPMX19_01342 +0.4 1.1 hypothetical protein compare
MPMX19_05575 +0.4 1.4 hypothetical protein compare
MPMX19_06012 +0.4 1.6 Transcriptional regulatory protein DegU compare
MPMX19_06632 +0.3 3.1 Toxin RTX-I translocation ATP-binding protein compare
MPMX19_01463 +0.3 2.0 hypothetical protein compare
MPMX19_06341 +0.3 1.4 hypothetical protein compare
MPMX19_05718 +0.3 2.2 hypothetical protein compare
MPMX19_04142 +0.3 2.4 hypothetical protein compare
MPMX19_03639 +0.3 2.0 Octopine transport system permease protein OccM compare
MPMX19_02421 +0.3 2.6 putative signaling protein compare
MPMX19_00044 +0.3 1.3 hypothetical protein compare
MPMX19_01727 +0.3 1.5 hypothetical protein compare
MPMX19_04478 +0.3 1.9 hypothetical protein compare
MPMX19_00490 +0.3 1.9 hypothetical protein compare
MPMX19_03715 +0.3 1.4 Response regulator ArlR compare
MPMX19_00370 +0.3 1.1 hypothetical protein compare
MPMX19_05470 +0.3 1.3 hypothetical protein compare
MPMX19_03114 +0.3 1.1 hypothetical protein compare
MPMX19_06437 +0.3 1.0 DNA-invertase hin compare
MPMX19_03866 +0.3 0.9 Ribose import permease protein RbsC compare
MPMX19_03494 +0.3 1.6 Regulatory protein AtoC compare
MPMX19_01420 +0.3 2.7 hypothetical protein compare
MPMX19_03538 +0.3 1.3 HTH-type transcriptional repressor NagR compare
MPMX19_03900 +0.3 1.5 Hca operon transcriptional activator HcaR compare
MPMX19_01125 +0.3 0.6 hypothetical protein compare
MPMX19_02295 +0.3 1.8 Periplasmic nitrate reductase, electron transfer subunit compare
MPMX19_05982 +0.3 1.2 hypothetical protein compare
MPMX19_02058 +0.3 1.2 hypothetical protein compare
MPMX19_05104 +0.3 1.0 hypothetical protein compare
MPMX19_02902 +0.3 1.1 hypothetical protein compare
MPMX19_05168 +0.3 1.8 Hemin transport system permease protein HmuU compare
MPMX19_01355 +0.3 2.7 hypothetical protein compare
MPMX19_03597 +0.3 1.7 C4-dicarboxylate transport transcriptional regulatory protein DctD compare
MPMX19_00211 +0.3 1.3 putative copper-importing P-type ATPase A compare
MPMX19_04786 +0.3 2.1 Thymidylate kinase compare
MPMX19_03710 +0.3 1.2 Glycine cleavage system transcriptional activator compare
MPMX19_03026 +0.3 1.4 Fructose import ATP-binding protein FrcA compare
MPMX19_02251 +0.3 0.7 hypothetical protein compare
MPMX19_00872 +0.3 1.0 hypothetical protein compare
MPMX19_06649 +0.3 2.7 hypothetical protein compare
MPMX19_04665 +0.3 1.7 hypothetical protein compare
MPMX19_00266 +0.3 1.0 hypothetical protein compare
MPMX19_00112 +0.3 1.2 Multidrug transporter EmrE compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm; low oxygen experiments