Experiment set1S72 for Azospirillum sp. SherDot2

Compare to:

NL-CCM; ambient oxygen

200 most important genes:

  gene name fitness t score description  
MPMX19_05023 -2.9 -2.7 hypothetical protein compare
MPMX19_05358 -2.5 -2.9 hypothetical protein compare
MPMX19_04952 -2.2 -3.2 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_03635 -2.1 -2.0 DNA-binding transcriptional activator DecR compare
MPMX19_01610 -1.9 -3.1 ATP-dependent DNA helicase PcrA compare
MPMX19_04963 -1.8 -2.3 Cysteine desulfurase IscS compare
MPMX19_05217 -1.8 -1.9 Flagellin compare
MPMX19_01053 -1.7 -4.1 Dihydroorotase compare
MPMX19_03906 -1.6 -10.9 Pca regulon regulatory protein compare
MPMX19_03722 -1.5 -2.5 hypothetical protein compare
MPMX19_02613 -1.5 -2.1 hypothetical protein compare
MPMX19_01054 -1.4 -5.1 Aspartate carbamoyltransferase compare
MPMX19_00838 -1.4 -2.9 GTP pyrophosphokinase rsh compare
MPMX19_03734 -1.3 -2.1 RutC family protein YjgH compare
MPMX19_02402 -1.3 -2.2 hypothetical protein compare
MPMX19_03752 -1.3 -2.1 hypothetical protein compare
MPMX19_00128 -1.3 -8.0 hypothetical protein compare
MPMX19_01400 -1.3 -2.6 hypothetical protein compare
MPMX19_04043 -1.2 -2.6 Aldehyde-alcohol dehydrogenase compare
MPMX19_06723 -1.2 -3.3 hypothetical protein compare
MPMX19_05901 -1.2 -2.8 Motility protein B compare
MPMX19_04738 -1.2 -2.1 hypothetical protein compare
MPMX19_00608 -1.2 -1.2 hypothetical protein compare
MPMX19_05220 -1.2 -2.4 hypothetical protein compare
MPMX19_02320 -1.2 -1.2 HTH-type transcriptional regulator GltR compare
MPMX19_00094 -1.2 -2.5 hypothetical protein compare
MPMX19_06762 -1.1 -2.2 Peptide deformylase compare
MPMX19_00976 -1.1 -2.0 ATP-dependent RNA helicase RhlE compare
MPMX19_01297 -1.1 -1.8 hypothetical protein compare
MPMX19_04171 -1.1 -2.0 16S ribosomal RNA compare
MPMX19_04119 -1.1 -2.6 hypothetical protein compare
MPMX19_00705 -1.0 -2.5 Cell division coordinator CpoB compare
MPMX19_01729 -1.0 -1.7 Ethylmalonyl-CoA/methylmalonyl-CoA epimerase compare
MPMX19_03470 -1.0 -2.1 Phosphatidylinositol phosphate synthase compare
MPMX19_03694 -1.0 -1.6 hypothetical protein compare
MPMX19_03096 -1.0 -1.9 hypothetical protein compare
MPMX19_00530 -1.0 -2.2 Orotate phosphoribosyltransferase compare
MPMX19_06777 -1.0 -2.0 hypothetical protein compare
MPMX19_03226 -1.0 -2.6 hypothetical protein compare
MPMX19_03787 -0.9 -0.8 hypothetical protein compare
MPMX19_01113 -0.9 -1.9 Adaptive-response sensory-kinase SasA compare
MPMX19_04701 -0.9 -2.2 Transcriptional regulatory protein FixJ compare
MPMX19_06211 -0.9 -1.8 tRNA-Ala compare
MPMX19_06746 -0.9 -0.8 Chemotaxis protein CheW compare
MPMX19_00126 -0.9 -1.9 hypothetical protein compare
MPMX19_01577 -0.9 -2.8 hypothetical protein compare
MPMX19_06876 -0.9 -2.5 Inner membrane amino-acid ABC transporter permease protein YhdY compare
MPMX19_06137 -0.9 -2.6 hypothetical protein compare
MPMX19_02177 -0.9 -2.6 Succinylornithine transaminase/acetylornithine aminotransferase compare
MPMX19_02817 -0.9 -1.7 Serine 3-dehydrogenase compare
MPMX19_00061 -0.9 -2.2 L-lysine 2,3-aminomutase compare
MPMX19_03169 -0.9 -1.7 Dihydroanticapsin 7-dehydrogenase compare
MPMX19_01630 -0.9 -2.7 Phosphoribosylamine--glycine ligase compare
MPMX19_04898 -0.9 -2.3 Transcriptional regulatory protein LnrK compare
MPMX19_06843 -0.9 -2.6 hypothetical protein compare
MPMX19_00266 -0.9 -1.6 hypothetical protein compare
MPMX19_03613 -0.9 -2.2 N-acetylglucosamine-6-phosphate deacetylase compare
MPMX19_01884 -0.9 -1.9 Phosphoribosylformylglycinamidine synthase subunit PurQ compare
MPMX19_01796 -0.9 -1.3 hypothetical protein compare
MPMX19_05511 -0.9 -2.2 hypothetical protein compare
MPMX19_05872 -0.9 -2.1 Redox-sensitive transcriptional activator SoxR compare
MPMX19_02559 -0.9 -1.9 7-methyl-GTP pyrophosphatase compare
MPMX19_02551 -0.9 -1.7 hypothetical protein compare
MPMX19_01883 -0.9 -3.9 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_01912 -0.8 -2.4 Acetyl-CoA acetyltransferase compare
MPMX19_03599 -0.8 -3.3 2-amino-5-chloromuconic acid deaminase compare
MPMX19_00304 -0.8 -2.2 Phosphatidylcholine synthase compare
MPMX19_00766 -0.8 -1.8 hypothetical protein compare
MPMX19_05719 -0.8 -1.8 hypothetical protein compare
MPMX19_01197 -0.8 -3.0 ECF RNA polymerase sigma factor EcfG compare
MPMX19_00148 -0.8 -2.1 hypothetical protein compare
MPMX19_01565 -0.8 -1.8 hypothetical protein compare
MPMX19_01365 -0.8 -1.8 hypothetical protein compare
MPMX19_04149 -0.8 -1.8 hypothetical protein compare
MPMX19_03634 -0.8 -2.1 Arginase compare
MPMX19_04668 -0.8 -1.4 HTH-type transcriptional regulator DmlR compare
MPMX19_01249 -0.8 -1.1 Periplasmic serine endoprotease DegP compare
MPMX19_03217 -0.8 -2.9 2-haloacrylate reductase compare
MPMX19_03064 -0.8 -2.3 Cytochrome c-type protein NapC compare
MPMX19_06789 -0.8 -1.7 Octopine catabolism/uptake operon regulatory protein OccR compare
MPMX19_05733 -0.8 -1.8 Biopolymer transport protein ExbD compare
MPMX19_05731 -0.8 -2.8 hypothetical protein compare
MPMX19_04826 -0.7 -2.3 hypothetical protein compare
MPMX19_04323 -0.7 -1.8 Segregation and condensation protein B compare
MPMX19_01613 -0.7 -2.0 hypothetical protein compare
MPMX19_03558 -0.7 -1.7 hypothetical protein compare
MPMX19_04835 -0.7 -1.7 hypothetical protein compare
MPMX19_04869 -0.7 -2.6 DNA polymerase I compare
MPMX19_00182 -0.7 -1.4 hypothetical protein compare
MPMX19_06382 -0.7 -2.4 putative MFS-type transporter YfcJ compare
MPMX19_06985 -0.7 -1.2 L-malyl-CoA/beta-methylmalyl-CoA lyase compare
MPMX19_01304 -0.7 -4.6 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX19_01277 -0.7 -3.2 hypothetical protein compare
MPMX19_06933 -0.7 -1.3 Manganese transport system ATP-binding protein MntB compare
MPMX19_01860 -0.7 -2.4 hypothetical protein compare
MPMX19_02962 -0.7 -2.9 hypothetical protein compare
MPMX19_05355 -0.7 -1.9 Transcriptional regulator SlyA compare
MPMX19_01718 -0.7 -1.4 Ribosomal large subunit pseudouridine synthase C compare
MPMX19_04864 -0.7 -1.7 hypothetical protein compare
MPMX19_03822 -0.7 -1.4 Sulfur carrier protein FdhD compare
MPMX19_00694 -0.7 -1.5 2',3'-cyclic-nucleotide 2'-phosphodiesterase compare
MPMX19_00122 -0.7 -1.9 hypothetical protein compare
MPMX19_00663 -0.7 -2.1 hypothetical protein compare
MPMX19_05727 -0.7 -3.3 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX19_01047 -0.7 -2.2 Transcriptional regulatory protein ros compare
MPMX19_01822 -0.7 -3.0 2-isopropylmalate synthase compare
MPMX19_03768 -0.7 -1.6 hypothetical protein compare
MPMX19_01777 -0.7 -1.7 2-aminoadipate transaminase compare
MPMX19_03298 -0.7 -1.3 hypothetical protein compare
MPMX19_02858 -0.7 -2.2 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase compare
MPMX19_01560 -0.7 -1.8 3'-5' exonuclease DinG compare
MPMX19_02268 -0.6 -2.0 hypothetical protein compare
MPMX19_03306 -0.6 -1.8 hypothetical protein compare
MPMX19_06743 -0.6 -1.7 Chemotaxis protein CheA compare
MPMX19_01559 -0.6 -1.9 hypothetical protein compare
MPMX19_00320 -0.6 -1.7 hypothetical protein compare
MPMX19_06001 -0.6 -2.5 hypothetical protein compare
MPMX19_00906 -0.6 -4.7 Amidophosphoribosyltransferase compare
MPMX19_02486 -0.6 -1.4 Chemotaxis protein CheY compare
MPMX19_03295 -0.6 -1.4 HTH-type transcriptional regulator McbR compare
MPMX19_03063 -0.6 -1.7 hypothetical protein compare
MPMX19_05982 -0.6 -1.8 hypothetical protein compare
MPMX19_03492 -0.6 -1.8 3'-5' exonuclease DinG compare
MPMX19_00131 -0.6 -1.5 hypothetical protein compare
MPMX19_06914 -0.6 -1.4 Acyl-CoA dehydrogenase FadE27 compare
MPMX19_01014 -0.6 -2.3 Indole-3-glycerol phosphate synthase compare
MPMX19_01424 -0.6 -3.2 Fumarate hydratase class II compare
MPMX19_02002 -0.6 -1.9 hypothetical protein compare
MPMX19_06456 -0.6 -1.0 hypothetical protein compare
MPMX19_00695 -0.6 -1.3 putative transcriptional regulatory protein compare
MPMX19_01321 -0.6 -2.1 tRNA-Cys compare
MPMX19_01084 -0.6 -2.3 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX19_05106 -0.6 -1.9 Glycine betaine uptake system ATP-binding protein YehX compare
MPMX19_01247 -0.6 -1.1 Transcriptional regulatory protein DegU compare
MPMX19_05014 -0.6 -1.3 Cytochrome c1 compare
MPMX19_03803 -0.6 -1.5 hypothetical protein compare
MPMX19_01545 -0.6 -0.8 Lon protease compare
MPMX19_00163 -0.6 -2.4 hypothetical protein compare
MPMX19_02727 -0.6 -1.8 hypothetical protein compare
MPMX19_04563 -0.6 -1.4 hypothetical protein compare
MPMX19_02267 -0.6 -0.9 hypothetical protein compare
MPMX19_03609 -0.6 -1.5 HTH-type transcriptional repressor NagR compare
MPMX19_06819 -0.6 -1.3 hypothetical protein compare
MPMX19_03005 -0.6 -1.3 Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha compare
MPMX19_00517 -0.6 -2.4 HTH-type transcriptional activator AmpR compare
MPMX19_01244 -0.6 -1.7 hypothetical protein compare
MPMX19_00089 -0.6 -1.4 hypothetical protein compare
MPMX19_04316 -0.6 -2.3 hypothetical protein compare
MPMX19_04084 -0.6 -1.7 hypothetical protein compare
MPMX19_03076 -0.6 -2.6 hypothetical protein compare
MPMX19_01401 -0.6 -1.1 Ubiquinone biosynthesis accessory factor UbiK compare
MPMX19_05835 -0.6 -2.6 Alkyl hydroperoxide reductase C compare
MPMX19_00977 -0.6 -2.7 hypothetical protein compare
MPMX19_02875 -0.6 -1.5 hypothetical protein compare
MPMX19_05748 -0.6 -1.5 Response regulator SaeR compare
MPMX19_01075 -0.6 -0.7 Molybdopterin synthase sulfur carrier subunit compare
MPMX19_06314 -0.6 -3.0 hypothetical protein compare
MPMX19_05272 -0.6 -1.7 hypothetical protein compare
MPMX19_05271 -0.6 -0.7 hypothetical protein compare
MPMX19_02539 -0.6 -2.0 hypothetical protein compare
MPMX19_04026 -0.6 -2.3 hypothetical protein compare
MPMX19_04341 -0.6 -1.9 hypothetical protein compare
MPMX19_00181 -0.6 -2.0 hypothetical protein compare
MPMX19_05779 -0.5 -1.4 Beta-ketoadipyl-CoA thiolase compare
MPMX19_05111 -0.5 -1.6 PqqA binding protein compare
MPMX19_00849 -0.5 -1.5 hypothetical protein compare
MPMX19_02543 -0.5 -0.9 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX19_06601 -0.5 -1.4 hypothetical protein compare
MPMX19_00632 -0.5 -1.9 Intermembrane phospholipid transport system binding protein MlaC compare
MPMX19_05119 -0.5 -4.0 Glucose-6-phosphate 1-dehydrogenase compare
MPMX19_02405 -0.5 -1.4 hypothetical protein compare
MPMX19_04951 -0.5 -3.4 hypothetical protein compare
MPMX19_00260 -0.5 -0.9 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_02105 -0.5 -1.2 hypothetical protein compare
MPMX19_03154 -0.5 -2.9 hypothetical protein compare
MPMX19_06134 -0.5 -1.6 hypothetical protein compare
MPMX19_05070 -0.5 -2.3 hypothetical protein compare
MPMX19_06086 -0.5 -2.9 Citrate synthase compare
MPMX19_03019 -0.5 -1.5 hypothetical protein compare
MPMX19_02912 -0.5 -1.6 hypothetical protein compare
MPMX19_00475 -0.5 -1.1 hypothetical protein compare
MPMX19_05266 -0.5 -2.0 Aspartate aminotransferase compare
MPMX19_02118 -0.5 -1.3 hypothetical protein compare
MPMX19_05524 -0.5 -2.3 hypothetical protein compare
MPMX19_03494 -0.5 -1.9 Regulatory protein AtoC compare
MPMX19_02950 -0.5 -1.7 Deoxyribose operon repressor compare
MPMX19_01283 -0.5 -1.4 hypothetical protein compare
MPMX19_06253 -0.5 -1.0 hypothetical protein compare
MPMX19_03428 -0.5 -2.6 hypothetical protein compare
MPMX19_03276 -0.5 -1.5 hypothetical protein compare
MPMX19_00839 -0.5 -1.0 hypothetical protein compare
MPMX19_05723 -0.5 -2.0 Carbamoyl dehydratase HypE compare
MPMX19_02149 -0.5 -1.5 hypothetical protein compare
MPMX19_00319 -0.5 -0.8 hypothetical protein compare
MPMX19_01761 -0.5 -2.1 Bacteriohemerythrin compare
MPMX19_03007 -0.5 -1.8 Arabinose import ATP-binding protein AraG compare
MPMX19_06966 -0.5 -1.0 hypothetical protein compare
MPMX19_00120 -0.5 -1.6 hypothetical protein compare
MPMX19_01720 -0.5 -1.4 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB compare
MPMX19_01654 -0.5 -3.2 HTH-type transcriptional regulator IscR compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm; ambient oxygen experiments