Experiment set1S71 for Azospirillum sp. SherDot2

Compare to:

NL-CCM; ambient oxygen

200 most important genes:

  gene name fitness t score description  
MPMX19_00680 -2.0 -3.5 Elongation factor P--(R)-beta-lysine ligase compare
MPMX19_06819 -2.0 -3.8 hypothetical protein compare
MPMX19_03906 -1.9 -13.6 Pca regulon regulatory protein compare
MPMX19_02543 -1.8 -2.9 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX19_00126 -1.7 -3.5 hypothetical protein compare
MPMX19_02267 -1.7 -1.9 hypothetical protein compare
MPMX19_00530 -1.6 -3.1 Orotate phosphoribosyltransferase compare
MPMX19_04115 -1.5 -1.5 Sensor histidine kinase RcsC compare
MPMX19_01053 -1.4 -4.0 Dihydroorotase compare
MPMX19_00128 -1.4 -8.8 hypothetical protein compare
MPMX19_00608 -1.3 -1.4 hypothetical protein compare
MPMX19_03165 -1.3 -2.9 hypothetical protein compare
MPMX19_01748 -1.3 -2.9 hypothetical protein compare
MPMX19_06777 -1.3 -2.0 hypothetical protein compare
MPMX19_01714 -1.2 -2.0 tRNA-modifying protein YgfZ compare
MPMX19_00066 -1.2 -2.2 hypothetical protein compare
MPMX19_04835 -1.2 -2.7 hypothetical protein compare
MPMX19_02559 -1.2 -2.8 7-methyl-GTP pyrophosphatase compare
MPMX19_05023 -1.2 -1.8 hypothetical protein compare
MPMX19_03654 -1.2 -2.8 Fructokinase compare
MPMX19_03295 -1.1 -2.4 HTH-type transcriptional regulator McbR compare
MPMX19_04952 -1.1 -1.8 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_05505 -1.1 -1.6 Leucine-responsive regulatory protein compare
MPMX19_01421 -1.1 -2.8 hypothetical protein compare
MPMX19_05606 -1.1 -2.1 hypothetical protein compare
MPMX19_00015 -1.1 -2.6 hypothetical protein compare
MPMX19_02981 -1.0 -4.5 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_03694 -1.0 -1.2 hypothetical protein compare
MPMX19_01883 -1.0 -5.3 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_02251 -1.0 -2.0 hypothetical protein compare
MPMX19_06353 -1.0 -1.4 hypothetical protein compare
MPMX19_06253 -1.0 -2.2 hypothetical protein compare
MPMX19_03141 -1.0 -2.3 hypothetical protein compare
MPMX19_00846 -1.0 -2.2 hypothetical protein compare
MPMX19_00705 -0.9 -2.6 Cell division coordinator CpoB compare
MPMX19_01499 -0.9 -3.5 hypothetical protein compare
MPMX19_03194 -0.9 -2.0 hypothetical protein compare
MPMX19_05872 -0.9 -2.3 Redox-sensitive transcriptional activator SoxR compare
MPMX19_00794 -0.9 -2.4 Transcriptional activator protein CopR compare
MPMX19_06952 -0.9 -3.0 Electron transfer flavoprotein subunit alpha compare
MPMX19_06700 -0.8 -1.6 Copper-sensing transcriptional repressor RicR compare
MPMX19_06785 -0.8 -1.9 L-idonate 5-dehydrogenase (NAD(P)(+)) compare
MPMX19_05217 -0.8 -1.3 Flagellin compare
MPMX19_03552 -0.8 -2.1 hypothetical protein compare
MPMX19_01834 -0.8 -1.9 hypothetical protein compare
MPMX19_05438 -0.8 -2.2 hypothetical protein compare
MPMX19_01314 -0.8 -3.2 hypothetical protein compare
MPMX19_03724 -0.8 -1.4 hypothetical protein compare
MPMX19_00167 -0.8 -1.8 hypothetical protein compare
MPMX19_01884 -0.8 -1.6 Phosphoribosylformylglycinamidine synthase subunit PurQ compare
MPMX19_03499 -0.8 -2.4 Formate dehydrogenase, cytochrome b556(fdo) subunit compare
MPMX19_01084 -0.8 -3.3 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX19_05818 -0.8 -1.8 hypothetical protein compare
MPMX19_01630 -0.8 -2.7 Phosphoribosylamine--glycine ligase compare
MPMX19_00576 -0.8 -1.9 hypothetical protein compare
MPMX19_01560 -0.8 -1.7 3'-5' exonuclease DinG compare
MPMX19_06267 -0.8 -2.2 hypothetical protein compare
MPMX19_06926 -0.8 -2.7 hypothetical protein compare
MPMX19_01297 -0.8 -1.6 hypothetical protein compare
MPMX19_05748 -0.8 -2.1 Response regulator SaeR compare
MPMX19_02116 -0.8 -1.4 Cold shock protein CspA compare
MPMX19_06090 -0.8 -1.7 Pyruvate dehydrogenase complex repressor compare
MPMX19_03871 -0.7 -1.2 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_05445 -0.7 -1.5 tRNA-Glu compare
MPMX19_03529 -0.7 -2.7 2,3-diketo-L-gulonate-binding periplasmic protein YiaO compare
MPMX19_06723 -0.7 -2.3 hypothetical protein compare
MPMX19_05896 -0.7 -1.6 hypothetical protein compare
MPMX19_06969 -0.7 -2.1 hypothetical protein compare
MPMX19_02737 -0.7 -3.2 Tryptophan synthase alpha chain compare
MPMX19_01565 -0.7 -1.7 hypothetical protein compare
MPMX19_00304 -0.7 -2.0 Phosphatidylcholine synthase compare
MPMX19_06236 -0.7 -2.1 hypothetical protein compare
MPMX19_03734 -0.7 -0.9 RutC family protein YjgH compare
MPMX19_00978 -0.7 -1.8 hypothetical protein compare
MPMX19_02828 -0.7 -2.9 Glutathione import ATP-binding protein GsiA compare
MPMX19_01796 -0.7 -1.5 hypothetical protein compare
MPMX19_04409 -0.7 -1.8 hypothetical protein compare
MPMX19_03491 -0.7 -1.4 putative FAD-linked oxidoreductase compare
MPMX19_01014 -0.7 -2.2 Indole-3-glycerol phosphate synthase compare
MPMX19_02202 -0.7 -1.1 hypothetical protein compare
MPMX19_02514 -0.7 -0.9 hypothetical protein compare
MPMX19_00906 -0.7 -5.1 Amidophosphoribosyltransferase compare
MPMX19_01277 -0.6 -3.8 hypothetical protein compare
MPMX19_06306 -0.6 -1.8 hypothetical protein compare
MPMX19_03453 -0.6 -2.7 Putative aliphatic sulfonates-binding protein compare
MPMX19_04251 -0.6 -2.8 C4-dicarboxylate transport transcriptional regulatory protein DctD compare
MPMX19_05727 -0.6 -3.6 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX19_02905 -0.6 -2.0 hypothetical protein compare
MPMX19_05455 -0.6 -3.2 hypothetical protein compare
MPMX19_06123 -0.6 -1.3 hypothetical protein compare
MPMX19_01054 -0.6 -2.9 Aspartate carbamoyltransferase compare
MPMX19_06111 -0.6 -2.5 Non-motile and phage-resistance protein compare
MPMX19_01939 -0.6 -2.3 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
MPMX19_00414 -0.6 -1.5 Pyruvate dehydrogenase complex repressor compare
MPMX19_03306 -0.6 -2.0 hypothetical protein compare
MPMX19_01822 -0.6 -3.2 2-isopropylmalate synthase compare
MPMX19_05358 -0.6 -1.3 hypothetical protein compare
MPMX19_04948 -0.6 -1.4 HTH-type transcriptional regulator GltR compare
MPMX19_02378 -0.6 -1.4 hypothetical protein compare
MPMX19_03728 -0.6 -1.5 hypothetical protein compare
MPMX19_01831 -0.6 -2.2 hypothetical protein compare
MPMX19_03217 -0.6 -2.5 2-haloacrylate reductase compare
MPMX19_02980 -0.6 -1.3 Hydrogen cyanide synthase subunit HcnA compare
MPMX19_00609 -0.6 -2.1 Chemotaxis protein CheY compare
MPMX19_00138 -0.6 -3.5 hypothetical protein compare
MPMX19_01777 -0.6 -1.9 2-aminoadipate transaminase compare
MPMX19_02538 -0.6 -1.2 hypothetical protein compare
MPMX19_00795 -0.6 -2.6 Adaptive-response sensory-kinase SasA compare
MPMX19_01304 -0.6 -4.2 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX19_05252 -0.6 -1.6 Carbon monoxide dehydrogenase medium chain compare
MPMX19_04081 -0.6 -1.4 hypothetical protein compare
MPMX19_00503 -0.6 -2.4 ATP-dependent Clp protease ATP-binding subunit ClpA compare
MPMX19_03193 -0.6 -2.4 hypothetical protein compare
MPMX19_05070 -0.6 -3.1 hypothetical protein compare
MPMX19_04963 -0.6 -1.3 Cysteine desulfurase IscS compare
MPMX19_04863 -0.6 -0.9 Transcriptional regulatory protein LnrK compare
MPMX19_00046 -0.6 -0.8 hypothetical protein compare
MPMX19_02134 -0.6 -3.0 Phage shock protein C compare
MPMX19_03765 -0.6 -2.1 hypothetical protein compare
MPMX19_02177 -0.6 -2.0 Succinylornithine transaminase/acetylornithine aminotransferase compare
MPMX19_03366 -0.5 -2.3 hypothetical protein compare
MPMX19_00234 -0.5 -1.9 hypothetical protein compare
MPMX19_01085 -0.5 -2.5 hypothetical protein compare
MPMX19_00260 -0.5 -1.2 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_06967 -0.5 -1.2 hypothetical protein compare
MPMX19_00148 -0.5 -1.5 hypothetical protein compare
MPMX19_02544 -0.5 -1.8 hypothetical protein compare
MPMX19_03859 -0.5 -1.5 hypothetical protein compare
MPMX19_03069 -0.5 -1.0 hypothetical protein compare
MPMX19_06345 -0.5 -2.2 Pyruvate synthase subunit PorC compare
MPMX19_00976 -0.5 -1.2 ATP-dependent RNA helicase RhlE compare
MPMX19_05294 -0.5 -2.4 hypothetical protein compare
MPMX19_00996 -0.5 -2.4 Metalloprotease MmpA compare
MPMX19_02714 -0.5 -1.5 hypothetical protein compare
MPMX19_06883 -0.5 -2.1 Choline trimethylamine-lyase activating enzyme compare
MPMX19_00166 -0.5 -1.1 hypothetical protein compare
MPMX19_01556 -0.5 -2.7 hypothetical protein compare
MPMX19_06426 -0.5 -2.1 hypothetical protein compare
MPMX19_06887 -0.5 -1.6 Adenine deaminase compare
MPMX19_04219 -0.5 -1.9 hypothetical protein compare
MPMX19_02745 -0.5 -1.9 putative nicotinate-nucleotide pyrophosphorylase [carboxylating] compare
MPMX19_01597 -0.5 -1.2 23S rRNA (uridine(2479)-2'-O)-methyltransferase compare
MPMX19_00182 -0.5 -1.2 hypothetical protein compare
MPMX19_06762 -0.5 -1.0 Peptide deformylase compare
MPMX19_02769 -0.5 -1.6 Ribokinase compare
MPMX19_05825 -0.5 -1.5 hypothetical protein compare
MPMX19_02392 -0.5 -4.2 Aspartate/prephenate aminotransferase compare
MPMX19_04874 -0.5 -2.2 hypothetical protein compare
MPMX19_02774 -0.5 -1.9 hypothetical protein compare
MPMX19_00574 -0.5 -2.0 hypothetical protein compare
MPMX19_06322 -0.5 -1.6 hypothetical protein compare
MPMX19_02606 -0.5 -3.5 Transcriptional regulatory protein ros compare
MPMX19_03064 -0.5 -1.5 Cytochrome c-type protein NapC compare
MPMX19_00904 -0.5 -3.1 DNA repair protein RadA compare
MPMX19_01076 -0.5 -1.1 Molybdopterin synthase catalytic subunit compare
MPMX19_01648 -0.5 -2.1 hypothetical protein compare
MPMX19_04104 -0.5 -3.0 hypothetical protein compare
MPMX19_04950 -0.5 -2.2 High-affinity branched-chain amino acid transport system permease protein LivH compare
MPMX19_05915 -0.5 -1.4 Flagellar M-ring protein compare
MPMX19_05109 -0.5 -1.7 hypothetical protein compare
MPMX19_04571 -0.5 -1.8 hypothetical protein compare
MPMX19_05464 -0.5 -3.0 hypothetical protein compare
MPMX19_03420 -0.5 -1.3 hypothetical protein compare
MPMX19_03322 -0.5 -2.6 hypothetical protein compare
MPMX19_04347 -0.5 -2.1 ATP-dependent Clp protease proteolytic subunit compare
MPMX19_03196 -0.5 -1.4 hypothetical protein compare
MPMX19_00329 -0.5 -2.0 Putative membrane protein insertion efficiency factor compare
MPMX19_00150 -0.5 -1.8 hypothetical protein compare
MPMX19_01912 -0.5 -1.5 Acetyl-CoA acetyltransferase compare
MPMX19_03259 -0.5 -2.5 Glycine betaine transport system permease protein OpuAB compare
MPMX19_02657 -0.5 -4.2 Glutamate synthase [NADPH] large chain compare
MPMX19_04408 -0.5 -1.2 tRNA1(Val) (adenine(37)-N6)-methyltransferase compare
MPMX19_03584 -0.5 -2.0 Adaptive-response sensory-kinase SasA compare
MPMX19_02055 -0.5 -1.6 Hypoxic response protein 1 compare
MPMX19_04660 -0.5 -2.1 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_02518 -0.5 -2.1 tRNA (guanine-N(7)-)-methyltransferase compare
MPMX19_04996 -0.5 -1.3 hypothetical protein compare
MPMX19_01400 -0.5 -1.3 hypothetical protein compare
MPMX19_04869 -0.5 -1.9 DNA polymerase I compare
MPMX19_04688 -0.5 -1.5 Bicarbonate transport ATP-binding protein CmpD compare
MPMX19_04282 -0.5 -2.1 hypothetical protein compare
MPMX19_00050 -0.5 -1.9 Pyridoxal phosphate homeostasis protein compare
MPMX19_06897 -0.4 -1.6 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_01168 -0.4 -1.9 Protein-L-isoaspartate O-methyltransferase compare
MPMX19_06156 -0.4 -1.1 hypothetical protein compare
MPMX19_05773 -0.4 -1.2 Putative 1,2-phenylacetyl-CoA epoxidase, subunit D compare
MPMX19_05143 -0.4 -0.8 hypothetical protein compare
MPMX19_00475 -0.4 -1.0 hypothetical protein compare
MPMX19_06696 -0.4 -1.6 hypothetical protein compare
MPMX19_02492 -0.4 -1.7 hypothetical protein compare
MPMX19_04818 -0.4 -2.0 Hydroxyacylglutathione hydrolase GloC compare
MPMX19_01669 -0.4 -1.8 Transcriptional regulator MraZ compare
MPMX19_01545 -0.4 -0.8 Lon protease compare
MPMX19_02658 -0.4 -3.5 Glutamate synthase [NADPH] small chain compare
MPMX19_01376 -0.4 -1.2 hypothetical protein compare
MPMX19_04701 -0.4 -0.8 Transcriptional regulatory protein FixJ compare
MPMX19_01227 -0.4 -2.8 hypothetical protein compare
MPMX19_05849 -0.4 -2.0 TorCAD operon transcriptional regulatory protein TorR compare
MPMX19_02862 -0.4 -1.8 hypothetical protein compare
MPMX19_03872 -0.4 -2.5 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm; ambient oxygen experiments