Experiment set1S70 for Azospirillum sp. SherDot2

Compare to:

NL-CCM; ambient oxygen

200 most important genes:

  gene name fitness t score description  
MPMX19_00126 -2.7 -4.7 hypothetical protein compare
MPMX19_03906 -2.3 -14.1 Pca regulon regulatory protein compare
MPMX19_06880 -2.0 -2.9 Validamycin A dioxygenase compare
MPMX19_02980 -2.0 -2.7 Hydrogen cyanide synthase subunit HcnA compare
MPMX19_02084 -1.9 -1.9 hypothetical protein compare
MPMX19_01499 -1.7 -5.3 hypothetical protein compare
MPMX19_00478 -1.7 -2.6 putative protein RP812 compare
MPMX19_01545 -1.7 -1.6 Lon protease compare
MPMX19_01718 -1.6 -2.8 Ribosomal large subunit pseudouridine synthase C compare
MPMX19_00167 -1.6 -2.5 hypothetical protein compare
MPMX19_00705 -1.5 -3.2 Cell division coordinator CpoB compare
MPMX19_06546 -1.5 -2.4 hypothetical protein compare
MPMX19_01714 -1.4 -2.1 tRNA-modifying protein YgfZ compare
MPMX19_00530 -1.4 -3.5 Orotate phosphoribosyltransferase compare
MPMX19_00128 -1.4 -9.1 hypothetical protein compare
MPMX19_06090 -1.4 -2.1 Pyruvate dehydrogenase complex repressor compare
MPMX19_05014 -1.4 -2.5 Cytochrome c1 compare
MPMX19_02177 -1.3 -3.9 Succinylornithine transaminase/acetylornithine aminotransferase compare
MPMX19_02951 -1.3 -2.4 Deoxyribose-phosphate aldolase 1 compare
MPMX19_00319 -1.2 -1.7 hypothetical protein compare
MPMX19_05825 -1.2 -3.0 hypothetical protein compare
MPMX19_01703 -1.2 -2.3 hypothetical protein compare
MPMX19_03787 -1.2 -1.5 hypothetical protein compare
MPMX19_00687 -1.2 -2.0 hypothetical protein compare
MPMX19_00689 -1.1 -2.4 Glyceraldehyde-3-phosphate dehydrogenase 1 compare
MPMX19_02267 -1.1 -1.7 hypothetical protein compare
MPMX19_00976 -1.1 -2.0 ATP-dependent RNA helicase RhlE compare
MPMX19_06700 -1.0 -2.1 Copper-sensing transcriptional repressor RicR compare
MPMX19_04119 -1.0 -2.8 hypothetical protein compare
MPMX19_01053 -1.0 -3.1 Dihydroorotase compare
MPMX19_01054 -1.0 -4.0 Aspartate carbamoyltransferase compare
MPMX19_05217 -0.9 -1.5 Flagellin compare
MPMX19_03276 -0.9 -1.8 hypothetical protein compare
MPMX19_06044 -0.9 -1.8 hypothetical protein compare
MPMX19_01597 -0.9 -1.8 23S rRNA (uridine(2479)-2'-O)-methyltransferase compare
MPMX19_05089 -0.9 -2.6 Acetyl-CoA acetyltransferase compare
MPMX19_01560 -0.9 -2.4 3'-5' exonuclease DinG compare
MPMX19_05680 -0.9 -2.9 Cell cycle response regulator CtrA compare
MPMX19_00576 -0.9 -2.3 hypothetical protein compare
MPMX19_01395 -0.9 -1.7 hypothetical protein compare
MPMX19_01630 -0.9 -2.7 Phosphoribosylamine--glycine ligase compare
MPMX19_05358 -0.8 -1.1 hypothetical protein compare
MPMX19_00794 -0.8 -2.7 Transcriptional activator protein CopR compare
MPMX19_01748 -0.8 -2.0 hypothetical protein compare
MPMX19_03252 -0.8 -2.7 hypothetical protein compare
MPMX19_02850 -0.8 -1.9 Glyceraldehyde-3-phosphate dehydrogenase 1 compare
MPMX19_01400 -0.8 -1.9 hypothetical protein compare
MPMX19_05220 -0.8 -2.1 hypothetical protein compare
MPMX19_05387 -0.8 -2.1 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
MPMX19_04615 -0.8 -1.9 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_05798 -0.8 -1.5 HTH-type transcriptional repressor NanR compare
MPMX19_02745 -0.8 -2.7 putative nicotinate-nucleotide pyrophosphorylase [carboxylating] compare
MPMX19_05065 -0.8 -1.8 Farnesyl diphosphate synthase compare
MPMX19_01059 -0.8 -0.9 hypothetical protein compare
MPMX19_00795 -0.8 -3.1 Adaptive-response sensory-kinase SasA compare
MPMX19_01883 -0.8 -4.2 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_02207 -0.8 -2.2 N-(5'-phosphoribosyl)anthranilate isomerase compare
MPMX19_01201 -0.8 -2.2 hypothetical protein compare
MPMX19_00503 -0.8 -3.0 ATP-dependent Clp protease ATP-binding subunit ClpA compare
MPMX19_03295 -0.8 -2.0 HTH-type transcriptional regulator McbR compare
MPMX19_04898 -0.8 -2.3 Transcriptional regulatory protein LnrK compare
MPMX19_00260 -0.8 -1.5 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_06777 -0.8 -1.9 hypothetical protein compare
MPMX19_03421 -0.8 -1.8 hypothetical protein compare
MPMX19_06102 -0.8 -2.3 Membrane-bound lytic murein transglycosylase C compare
MPMX19_02334 -0.8 -3.0 hypothetical protein compare
MPMX19_01235 -0.8 -1.5 hypothetical protein compare
MPMX19_05954 -0.8 -3.1 hypothetical protein compare
MPMX19_01084 -0.8 -3.1 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX19_00148 -0.7 -1.6 hypothetical protein compare
MPMX19_03425 -0.7 -0.9 hypothetical protein compare
MPMX19_03169 -0.7 -1.4 Dihydroanticapsin 7-dehydrogenase compare
MPMX19_04835 -0.7 -1.6 hypothetical protein compare
MPMX19_01777 -0.7 -2.0 2-aminoadipate transaminase compare
MPMX19_01297 -0.7 -1.5 hypothetical protein compare
MPMX19_03765 -0.7 -2.2 hypothetical protein compare
MPMX19_04996 -0.7 -1.4 hypothetical protein compare
MPMX19_00236 -0.7 -1.9 HTH-type transcriptional regulator IscR compare
MPMX19_00129 -0.7 -1.2 hypothetical protein compare
MPMX19_05586 -0.7 -1.1 hypothetical protein compare
MPMX19_01304 -0.7 -4.5 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX19_05472 -0.7 -2.3 hypothetical protein compare
MPMX19_06567 -0.7 -1.5 hypothetical protein compare
MPMX19_02553 -0.7 -3.2 Protein-export protein SecB compare
MPMX19_02202 -0.7 -1.7 hypothetical protein compare
MPMX19_06876 -0.7 -1.9 Inner membrane amino-acid ABC transporter permease protein YhdY compare
MPMX19_05100 -0.7 -2.2 hypothetical protein compare
MPMX19_03197 -0.7 -1.7 hypothetical protein compare
MPMX19_03196 -0.7 -2.0 hypothetical protein compare
MPMX19_02268 -0.7 -2.2 hypothetical protein compare
MPMX19_04535 -0.7 -2.0 Maleate isomerase compare
MPMX19_05727 -0.7 -3.6 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX19_03752 -0.7 -1.2 hypothetical protein compare
MPMX19_05109 -0.7 -2.4 hypothetical protein compare
MPMX19_05921 -0.7 -1.3 hypothetical protein compare
MPMX19_02120 -0.7 -1.6 hypothetical protein compare
MPMX19_05824 -0.7 -2.2 hypothetical protein compare
MPMX19_06373 -0.7 -1.3 Lipoprotein signal peptidase compare
MPMX19_01353 -0.6 -1.7 hypothetical protein compare
MPMX19_04210 -0.6 -1.3 hypothetical protein compare
MPMX19_06141 -0.6 -2.2 Intermembrane phospholipid transport system permease protein MlaE compare
MPMX19_04254 -0.6 -2.7 NADP-dependent malic enzyme compare
MPMX19_03972 -0.6 -1.9 Enolase compare
MPMX19_05896 -0.6 -1.6 hypothetical protein compare
MPMX19_01617 -0.6 -1.1 hypothetical protein compare
MPMX19_01822 -0.6 -3.2 2-isopropylmalate synthase compare
MPMX19_06560 -0.6 -2.8 hypothetical protein compare
MPMX19_03069 -0.6 -1.6 hypothetical protein compare
MPMX19_05872 -0.6 -1.4 Redox-sensitive transcriptional activator SoxR compare
MPMX19_00504 -0.6 -2.3 ATP-dependent Clp protease adapter protein ClpS compare
MPMX19_02905 -0.6 -1.7 hypothetical protein compare
MPMX19_00351 -0.6 -3.0 hypothetical protein compare
MPMX19_06762 -0.6 -1.6 Peptide deformylase compare
MPMX19_00370 -0.6 -1.9 hypothetical protein compare
MPMX19_03772 -0.6 -2.1 hypothetical protein compare
MPMX19_05624 -0.6 -1.0 hypothetical protein compare
MPMX19_01819 -0.6 -2.7 Holin-like protein CidA compare
MPMX19_00695 -0.6 -1.5 putative transcriptional regulatory protein compare
MPMX19_01415 -0.6 -1.4 hypothetical protein compare
MPMX19_06778 -0.6 -2.6 HTH-type transcriptional regulator YhaJ compare
MPMX19_00089 -0.6 -1.5 hypothetical protein compare
MPMX19_06789 -0.6 -1.0 Octopine catabolism/uptake operon regulatory protein OccR compare
MPMX19_00235 -0.6 -2.8 hypothetical protein compare
MPMX19_03766 -0.6 -2.1 Sensor histidine kinase RcsC compare
MPMX19_05111 -0.6 -0.6 PqqA binding protein compare
MPMX19_03646 -0.6 -2.8 Histidinol-phosphate aminotransferase compare
MPMX19_01113 -0.6 -1.4 Adaptive-response sensory-kinase SasA compare
MPMX19_04079 -0.6 -1.2 hypothetical protein compare
MPMX19_01654 -0.6 -3.6 HTH-type transcriptional regulator IscR compare
MPMX19_05176 -0.6 -1.2 4-hydroxy-3-prenylphenylpyruvate oxygenase/4-hydroxy-3-prenylbenzoate synthase compare
MPMX19_00143 -0.6 -3.1 Tyrosine recombinase XerC compare
MPMX19_04430 -0.6 -2.1 hypothetical protein compare
MPMX19_06723 -0.6 -1.9 hypothetical protein compare
MPMX19_03620 -0.6 -1.9 hypothetical protein compare
MPMX19_00906 -0.6 -4.5 Amidophosphoribosyltransferase compare
MPMX19_00205 -0.6 -2.8 hypothetical protein compare
MPMX19_03871 -0.6 -0.9 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_02514 -0.6 -1.0 hypothetical protein compare
MPMX19_01076 -0.6 -1.3 Molybdopterin synthase catalytic subunit compare
MPMX19_04353 -0.6 -3.0 hypothetical protein compare
MPMX19_05023 -0.6 -1.1 hypothetical protein compare
MPMX19_00651 -0.6 -3.3 hypothetical protein compare
MPMX19_04812 -0.6 -2.9 hypothetical protein compare
MPMX19_04951 -0.6 -3.6 hypothetical protein compare
MPMX19_03784 -0.6 -1.1 hypothetical protein compare
MPMX19_04864 -0.6 -1.6 hypothetical protein compare
MPMX19_03859 -0.6 -1.5 hypothetical protein compare
MPMX19_00156 -0.6 -2.2 hypothetical protein compare
MPMX19_06934 -0.6 -1.9 Manganese transport system membrane protein MntB compare
MPMX19_04058 -0.6 -1.6 Aldehyde oxidoreductase iron-sulfur-binding subunit PaoA compare
MPMX19_01385 -0.6 -1.9 Vitamin B12 import ATP-binding protein BtuD compare
MPMX19_03936 -0.6 -2.3 Acetyl-CoA acetyltransferase compare
MPMX19_03806 -0.5 -1.8 hypothetical protein compare
MPMX19_05119 -0.5 -4.2 Glucose-6-phosphate 1-dehydrogenase compare
MPMX19_04963 -0.5 -1.2 Cysteine desulfurase IscS compare
MPMX19_06746 -0.5 -0.7 Chemotaxis protein CheW compare
MPMX19_02981 -0.5 -2.3 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_02134 -0.5 -2.7 Phage shock protein C compare
MPMX19_01314 -0.5 -2.6 hypothetical protein compare
MPMX19_06808 -0.5 -1.3 HTH-type transcriptional regulator DmlR compare
MPMX19_03271 -0.5 -3.1 hypothetical protein compare
MPMX19_05271 -0.5 -1.1 hypothetical protein compare
MPMX19_06579 -0.5 -1.6 Carnitine monooxygenase oxygenase subunit compare
MPMX19_03586 -0.5 -1.2 HTH-type transcriptional repressor ComR compare
MPMX19_00473 -0.5 -2.1 hypothetical protein compare
MPMX19_05455 -0.5 -1.8 hypothetical protein compare
MPMX19_05449 -0.5 -1.6 hypothetical protein compare
MPMX19_06123 -0.5 -1.2 hypothetical protein compare
MPMX19_04958 -0.5 -1.1 Methyl-accepting chemotaxis protein compare
MPMX19_02888 -0.5 -3.0 6-phosphogluconolactonase compare
MPMX19_02078 -0.5 -1.8 hypothetical protein compare
MPMX19_04569 -0.5 -1.7 Anti-sigma-F factor NrsF compare
MPMX19_05652 -0.5 -1.2 hypothetical protein compare
MPMX19_00366 -0.5 -2.1 hypothetical protein compare
MPMX19_04647 -0.5 -1.2 hypothetical protein compare
MPMX19_03154 -0.5 -3.0 hypothetical protein compare
MPMX19_00606 -0.5 -2.6 3-isopropylmalate dehydratase small subunit 1 compare
MPMX19_00173 -0.5 -1.7 hypothetical protein compare
MPMX19_05445 -0.5 -1.0 tRNA-Glu compare
MPMX19_03322 -0.5 -2.3 hypothetical protein compare
MPMX19_02677 -0.5 -2.2 hypothetical protein compare
MPMX19_00304 -0.5 -1.3 Phosphatidylcholine synthase compare
MPMX19_02737 -0.5 -2.3 Tryptophan synthase alpha chain compare
MPMX19_05719 -0.5 -1.1 hypothetical protein compare
MPMX19_02171 -0.5 -2.7 putative ABC transporter ATP-binding protein YejF compare
MPMX19_00712 -0.5 -2.5 hypothetical protein compare
MPMX19_04699 -0.5 -1.2 hypothetical protein compare
MPMX19_06390 -0.5 -2.2 hypothetical protein compare
MPMX19_02234 -0.5 -2.1 hypothetical protein compare
MPMX19_02484 -0.5 -1.1 Heat-inducible transcription repressor HrcA compare
MPMX19_01410 -0.5 -3.0 hypothetical protein compare
MPMX19_00131 -0.5 -1.1 hypothetical protein compare
MPMX19_04179 -0.5 -2.3 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_04873 -0.5 -2.8 hypothetical protein compare
MPMX19_02911 -0.5 -1.3 hypothetical protein compare
MPMX19_02492 -0.5 -1.3 hypothetical protein compare
MPMX19_03768 -0.5 -1.3 hypothetical protein compare
MPMX19_02902 -0.5 -1.4 hypothetical protein compare
MPMX19_04949 -0.5 -2.0 Leu/Ile/Val-binding protein compare
MPMX19_05453 -0.5 -1.3 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm; ambient oxygen experiments