Experiment set1S68 for Azospirillum sp. SherDot2

Compare to:

NL-CCM; ambient oxygen

200 most detrimental genes:

  gene name fitness t score description  
MPMX19_01480 +1.9 10.3 hypothetical protein compare
MPMX19_05690 +1.8 13.4 Protein phosphotransferase ChpT compare
MPMX19_01479 +1.7 10.9 hypothetical protein compare
MPMX19_01495 +1.7 5.8 hypothetical protein compare
MPMX19_01482 +1.6 13.3 hypothetical protein compare
MPMX19_01349 +1.6 12.5 hypothetical protein compare
MPMX19_00864 +1.6 5.9 Flagellar hook-basal body complex protein FliE compare
MPMX19_02460 +1.5 14.0 Motility protein A compare
MPMX19_04088 +1.5 6.6 Signal recognition particle 54 kDa protein compare
MPMX19_01481 +1.5 12.2 Flagellar motor switch protein FliM compare
MPMX19_06545 +1.5 13.3 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase compare
MPMX19_04200 +1.5 9.3 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase compare
MPMX19_06577 +1.4 11.5 hypothetical protein compare
MPMX19_04000 +1.4 5.4 Flagellar motor switch protein FliG compare
MPMX19_04199 +1.4 10.1 Pseudaminic acid synthase compare
MPMX19_04225 +1.4 7.9 hypothetical protein compare
MPMX19_04198 +1.4 12.3 hypothetical protein compare
MPMX19_00863 +1.4 9.8 Flagellar basal-body rod protein FlgC compare
MPMX19_04090 +1.4 11.1 Anaerobic nitric oxide reductase transcription regulator NorR compare
MPMX19_04258 +1.4 5.0 hypothetical protein compare
MPMX19_01494 +1.4 9.7 Flagellar P-ring protein compare
MPMX19_06581 +1.4 9.8 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 2 compare
MPMX19_04092 +1.4 7.5 Flagellar motor switch protein FliN compare
MPMX19_01486 +1.4 9.1 Flagellar L-ring protein compare
MPMX19_06544 +1.4 11.9 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) compare
MPMX19_00866 +1.4 9.2 Flagellar biosynthetic protein FliR compare
MPMX19_04094 +1.3 9.9 Flagellar M-ring protein compare
MPMX19_01497 +1.3 5.8 hypothetical protein compare
MPMX19_04204 +1.3 9.9 D-alanine--D-alanyl carrier protein ligase compare
MPMX19_00708 +1.3 10.8 hypothetical protein compare
MPMX19_05685 +1.3 10.1 Protein-glutamate methylesterase/protein-glutamine glutaminase 2 compare
MPMX19_01484 +1.3 7.7 Flagellar basal-body rod protein FlgG compare
MPMX19_04223 +1.3 11.4 hypothetical protein compare
MPMX19_04222 +1.3 11.3 hypothetical protein compare
MPMX19_00854 +1.3 11.9 hypothetical protein compare
MPMX19_04207 +1.3 4.0 hypothetical protein compare
MPMX19_00868 +1.3 11.7 Sensor kinase CckA compare
MPMX19_01485 +1.3 9.7 hypothetical protein compare
MPMX19_00311 +1.3 11.7 hypothetical protein compare
MPMX19_06580 +1.2 6.5 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_01483 +1.2 10.1 Flagellar basal-body rod protein FlgG compare
MPMX19_00862 +1.2 8.9 hypothetical protein compare
MPMX19_04089 +1.2 10.5 Flagellar biosynthesis protein FlhA compare
MPMX19_00858 +1.2 5.5 Flagellar biosynthetic protein FliP compare
MPMX19_05714 +1.2 8.4 hypothetical protein compare
MPMX19_04093 +1.2 5.4 hypothetical protein compare
MPMX19_04224 +1.2 10.9 hypothetical protein compare
MPMX19_03976 +1.2 6.7 hypothetical protein compare
MPMX19_01781 +1.1 9.0 Enoyl-[acyl-carrier-protein] reductase [NADH] FabI compare
MPMX19_05679 +1.1 8.3 Flagellum-specific ATP synthase compare
MPMX19_04212 +1.1 9.3 Photosystem I assembly protein Ycf3 compare
MPMX19_00867 +1.1 9.7 Flagellar biosynthetic protein FlhB compare
MPMX19_01811 +1.1 3.9 hypothetical protein compare
MPMX19_04206 +1.1 6.2 3-oxoacyl-[acyl-carrier-protein] synthase 3 compare
MPMX19_06582 +1.1 9.1 hypothetical protein compare
MPMX19_00438 +1.0 8.5 (R)-specific enoyl-CoA hydratase compare
MPMX19_00166 +1.0 2.5 hypothetical protein compare
MPMX19_00212 +1.0 8.6 Nitrogen fixation regulation protein FixK compare
MPMX19_04209 +1.0 8.6 Lipopolysaccharide assembly protein B compare
MPMX19_05104 +1.0 2.4 hypothetical protein compare
MPMX19_01496 +1.0 6.4 hypothetical protein compare
MPMX19_02668 +1.0 7.5 RNA polymerase sigma-54 factor 2 compare
MPMX19_05687 +1.0 5.0 Chemotaxis protein CheW compare
MPMX19_05678 +1.0 6.3 hypothetical protein compare
MPMX19_06510 +1.0 2.8 Aliphatic sulfonates import ATP-binding protein SsuB compare
MPMX19_03072 +1.0 1.4 hypothetical protein compare
MPMX19_04622 +0.9 6.9 hypothetical protein compare
MPMX19_05254 +0.9 2.2 Carbon monoxide dehydrogenase small chain compare
MPMX19_05193 +0.9 2.3 Taurine-binding periplasmic protein compare
MPMX19_02136 +0.9 1.1 Phage shock protein A compare
MPMX19_06585 +0.9 8.3 hypothetical protein compare
MPMX19_06519 +0.9 2.1 HTH-type transcriptional repressor NagR compare
MPMX19_00725 +0.9 5.4 Transcriptional regulatory protein ros compare
MPMX19_01493 +0.9 3.8 Flagellar assembly protein FliX compare
MPMX19_04091 +0.8 5.6 Chemotaxis protein PomA compare
MPMX19_02039 +0.8 4.6 hypothetical protein compare
MPMX19_06578 +0.8 5.4 hypothetical protein compare
MPMX19_04624 +0.8 5.6 hypothetical protein compare
MPMX19_04208 +0.8 3.0 flagellum biosynthesis repressor protein FlbT compare
MPMX19_00515 +0.8 5.8 hypothetical protein compare
MPMX19_05623 +0.8 3.8 Photosynthetic apparatus regulatory protein RegA compare
MPMX19_06193 +0.8 1.3 Flagellar hook-basal body complex protein FliE compare
MPMX19_06569 +0.8 1.9 hypothetical protein compare
MPMX19_04205 +0.8 3.4 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_01955 +0.8 1.7 Putative anti-sigma factor antagonist compare
MPMX19_06584 +0.8 7.1 Asparagine synthetase [glutamine-hydrolyzing] 1 compare
MPMX19_01073 +0.8 3.0 5'-nucleotidase compare
MPMX19_03655 +0.8 1.4 hypothetical protein compare
MPMX19_00853 +0.8 5.5 hypothetical protein compare
MPMX19_02251 +0.8 1.9 hypothetical protein compare
MPMX19_05586 +0.7 1.5 hypothetical protein compare
MPMX19_05688 +0.7 5.2 Sensor histidine kinase RcsC compare
MPMX19_01864 +0.7 1.7 Regulatory protein AtoC compare
MPMX19_05686 +0.7 2.6 Chemotaxis protein CheY compare
MPMX19_02871 +0.7 2.8 HTH-type transcriptional activator RhaR compare
MPMX19_03096 +0.7 1.5 hypothetical protein compare
MPMX19_05534 +0.7 1.8 DNA gyrase inhibitor YacG compare
MPMX19_06221 +0.7 3.2 L-2-keto-3-deoxyarabonate dehydratase compare
MPMX19_05622 +0.7 5.6 Sensor histidine kinase RegB compare
MPMX19_04682 +0.7 1.6 hypothetical protein compare
MPMX19_05430 +0.7 1.7 HTH-type transcriptional regulator DmlR compare
MPMX19_01159 +0.7 6.0 Presqualene diphosphate synthase compare
MPMX19_00335 +0.7 1.9 Magnesium transport protein CorA compare
MPMX19_04638 +0.7 1.9 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_05606 +0.7 1.6 hypothetical protein compare
MPMX19_02801 +0.7 1.6 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_01067 +0.7 1.1 hypothetical protein compare
MPMX19_03450 +0.7 1.2 hypothetical protein compare
MPMX19_06644 +0.7 6.2 GDP-mannose 4,6-dehydratase compare
MPMX19_05127 +0.7 2.5 hypothetical protein compare
MPMX19_02937 +0.7 1.7 hypothetical protein compare
MPMX19_00851 +0.7 4.8 hypothetical protein compare
MPMX19_01645 +0.7 1.4 HTH-type transcriptional regulator GltC compare
MPMX19_04968 +0.7 1.7 hypothetical protein compare
MPMX19_04474 +0.7 3.1 hypothetical protein compare
MPMX19_01196 +0.7 2.4 hypothetical protein compare
MPMX19_06197 +0.7 1.2 hypothetical protein compare
MPMX19_06297 +0.7 1.4 hypothetical protein compare
MPMX19_04087 +0.7 2.6 Flagellum site-determining protein YlxH compare
MPMX19_02115 +0.7 2.4 hypothetical protein compare
MPMX19_01605 +0.6 4.2 Chemotaxis protein CheY compare
MPMX19_06734 +0.6 5.9 Alginate biosynthesis protein AlgA compare
MPMX19_06121 +0.6 3.0 hypothetical protein compare
MPMX19_02772 +0.6 1.2 N-acetylcysteine deacetylase compare
MPMX19_00860 +0.6 1.7 hypothetical protein compare
MPMX19_01875 +0.6 2.7 hypothetical protein compare
MPMX19_02109 +0.6 2.6 hypothetical protein compare
MPMX19_05178 +0.6 2.5 Alkanesulfonate monooxygenase compare
MPMX19_04508 +0.6 2.3 Phosphoglycolate phosphatase compare
MPMX19_06123 +0.6 1.6 hypothetical protein compare
MPMX19_03776 +0.6 2.9 hypothetical protein compare
MPMX19_06579 +0.6 1.8 Carnitine monooxygenase oxygenase subunit compare
MPMX19_03710 +0.6 2.3 Glycine cleavage system transcriptional activator compare
MPMX19_01949 +0.6 5.1 Chemotaxis protein CheW compare
MPMX19_01498 +0.6 4.5 hypothetical protein compare
MPMX19_03924 +0.6 1.9 hypothetical protein compare
MPMX19_06887 +0.6 2.1 Adenine deaminase compare
MPMX19_01604 +0.6 2.5 hypothetical protein compare
MPMX19_01125 +0.6 1.4 hypothetical protein compare
MPMX19_04623 +0.6 3.0 hypothetical protein compare
MPMX19_04095 +0.6 1.9 hypothetical protein compare
MPMX19_05440 +0.6 2.1 hypothetical protein compare
MPMX19_02744 +0.6 2.9 Magnesium transport protein CorA compare
MPMX19_06989 +0.6 1.7 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_01926 +0.6 3.6 Small heat shock protein IbpA compare
MPMX19_06547 +0.5 2.5 hypothetical protein compare
MPMX19_06648 +0.5 2.6 hypothetical protein compare
MPMX19_06874 +0.5 1.6 hypothetical protein compare
MPMX19_02426 +0.5 3.7 hypothetical protein compare
MPMX19_01719 +0.5 1.5 Putative fluoride ion transporter CrcB compare
MPMX19_06488 +0.5 1.5 Taurine-binding periplasmic protein compare
MPMX19_02248 +0.5 1.8 hypothetical protein compare
MPMX19_06539 +0.5 1.1 hypothetical protein compare
MPMX19_03694 +0.5 1.1 hypothetical protein compare
MPMX19_04202 +0.5 2.4 Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system compare
MPMX19_06099 +0.5 4.1 hypothetical protein compare
MPMX19_01617 +0.5 1.0 hypothetical protein compare
MPMX19_03212 +0.5 1.8 hypothetical protein compare
MPMX19_03093 +0.5 1.8 Manganese import ATP-binding protein ScaC compare
MPMX19_06230 +0.5 1.4 hypothetical protein compare
MPMX19_00534 +0.5 3.5 hypothetical protein compare
MPMX19_06805 +0.5 2.6 hypothetical protein compare
MPMX19_06253 +0.5 1.2 hypothetical protein compare
MPMX19_00718 +0.5 1.6 hypothetical protein compare
MPMX19_06567 +0.5 2.0 hypothetical protein compare
MPMX19_05584 +0.5 2.3 hypothetical protein compare
MPMX19_05748 +0.5 1.4 Response regulator SaeR compare
MPMX19_02746 +0.5 3.4 Peptidyl-lysine N-acetyltransferase Pat compare
MPMX19_06924 +0.5 1.9 hypothetical protein compare
MPMX19_06235 +0.5 1.7 Glycine cleavage system transcriptional activator compare
MPMX19_05454 +0.5 1.5 hypothetical protein compare
MPMX19_06146 +0.5 1.2 hypothetical protein compare
MPMX19_05930 +0.5 1.5 Dipeptidyl-peptidase 6 compare
MPMX19_03295 +0.5 1.3 HTH-type transcriptional regulator McbR compare
MPMX19_05095 +0.5 1.6 Toxin YoeB compare
MPMX19_06594 +0.5 4.4 hypothetical protein compare
MPMX19_03374 +0.5 2.6 Alpha-hemolysin translocation ATP-binding protein HlyB compare
MPMX19_06171 +0.5 2.4 hypothetical protein compare
MPMX19_01012 +0.5 1.6 Cyclic pyranopterin monophosphate synthase compare
MPMX19_03965 +0.5 4.3 Poly(3-hydroxyalkanoate) polymerase subunit PhaC compare
MPMX19_02538 +0.5 0.9 hypothetical protein compare
MPMX19_05082 +0.5 1.7 hypothetical protein compare
MPMX19_04636 +0.5 1.2 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_04724 +0.5 1.8 hypothetical protein compare
MPMX19_03631 +0.5 0.9 hypothetical protein compare
MPMX19_02295 +0.5 2.6 Periplasmic nitrate reductase, electron transfer subunit compare
MPMX19_02608 +0.5 1.9 hypothetical protein compare
MPMX19_02382 +0.5 1.9 hypothetical protein compare
MPMX19_03816 +0.5 1.3 hypothetical protein compare
MPMX19_05231 +0.5 1.9 1,2-epoxyphenylacetyl-CoA isomerase compare
MPMX19_05734 +0.5 2.0 Tol-Pal system protein TolQ compare
MPMX19_06849 +0.5 2.2 Glutarate-semialdehyde dehydrogenase compare
MPMX19_02379 +0.5 2.4 hypothetical protein compare
MPMX19_02300 +0.5 1.5 Transcription elongation factor GreA compare
MPMX19_00208 +0.5 1.1 hypothetical protein compare
MPMX19_04863 +0.5 1.2 Transcriptional regulatory protein LnrK compare
MPMX19_03635 +0.4 0.9 DNA-binding transcriptional activator DecR compare
MPMX19_02536 +0.4 1.7 hypothetical protein compare
MPMX19_02559 +0.4 0.9 7-methyl-GTP pyrophosphatase compare
MPMX19_00956 +0.4 1.7 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm; ambient oxygen experiments