Experiment set1S67 for Azospirillum sp. SherDot2

Compare to:

NL-CCM; ambient oxygen

200 most important genes:

  gene name fitness t score description  
MPMX19_01918 -2.2 -2.5 tRNA-Ala compare
MPMX19_03906 -2.1 -13.9 Pca regulon regulatory protein compare
MPMX19_06967 -1.7 -2.8 hypothetical protein compare
MPMX19_05387 -1.7 -3.7 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
MPMX19_05606 -1.6 -3.0 hypothetical protein compare
MPMX19_06808 -1.6 -3.0 HTH-type transcriptional regulator DmlR compare
MPMX19_02218 -1.6 -2.5 hypothetical protein compare
MPMX19_00128 -1.5 -9.2 hypothetical protein compare
MPMX19_01545 -1.4 -1.6 Lon protease compare
MPMX19_03609 -1.4 -2.4 HTH-type transcriptional repressor NagR compare
MPMX19_01729 -1.3 -2.1 Ethylmalonyl-CoA/methylmalonyl-CoA epimerase compare
MPMX19_00126 -1.3 -3.1 hypothetical protein compare
MPMX19_04958 -1.3 -3.2 Methyl-accepting chemotaxis protein compare
MPMX19_00530 -1.3 -3.2 Orotate phosphoribosyltransferase compare
MPMX19_06914 -1.2 -2.6 Acyl-CoA dehydrogenase FadE27 compare
MPMX19_00304 -1.2 -2.7 Phosphatidylcholine synthase compare
MPMX19_00344 -1.2 -2.2 hypothetical protein compare
MPMX19_01703 -1.2 -2.4 hypothetical protein compare
MPMX19_02405 -1.1 -3.0 hypothetical protein compare
MPMX19_02511 -1.1 -1.6 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase compare
MPMX19_02664 -1.1 -1.7 Arabinose 5-phosphate isomerase KdsD compare
MPMX19_01394 -1.1 -1.5 hypothetical protein compare
MPMX19_03634 -1.1 -3.0 Arginase compare
MPMX19_05355 -1.1 -3.3 Transcriptional regulator SlyA compare
MPMX19_04682 -1.1 -1.6 hypothetical protein compare
MPMX19_03724 -1.1 -1.2 hypothetical protein compare
MPMX19_00319 -1.1 -1.4 hypothetical protein compare
MPMX19_01395 -1.1 -2.2 hypothetical protein compare
MPMX19_04615 -1.0 -2.2 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_01585 -1.0 -2.5 Zinc uptake regulation protein compare
MPMX19_02298 -1.0 -2.5 hypothetical protein compare
MPMX19_00131 -1.0 -1.8 hypothetical protein compare
MPMX19_02084 -1.0 -1.5 hypothetical protein compare
MPMX19_00705 -1.0 -2.6 Cell division coordinator CpoB compare
MPMX19_01054 -1.0 -4.2 Aspartate carbamoyltransferase compare
MPMX19_04668 -1.0 -2.1 HTH-type transcriptional regulator DmlR compare
MPMX19_03871 -1.0 -2.1 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_06746 -1.0 -1.9 Chemotaxis protein CheW compare
MPMX19_03654 -1.0 -2.1 Fructokinase compare
MPMX19_05100 -0.9 -2.4 hypothetical protein compare
MPMX19_05016 -0.9 -1.7 Sensor histidine kinase RcsC compare
MPMX19_00663 -0.9 -2.9 hypothetical protein compare
MPMX19_02268 -0.9 -2.8 hypothetical protein compare
MPMX19_06804 -0.9 -1.2 hypothetical protein compare
MPMX19_02543 -0.9 -1.9 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX19_03790 -0.9 -2.1 hypothetical protein compare
MPMX19_06821 -0.9 -2.3 (E)-2-((N-methylformamido)methylene)succinate hydrolase compare
MPMX19_02980 -0.9 -1.3 Hydrogen cyanide synthase subunit HcnA compare
MPMX19_05070 -0.9 -3.2 hypothetical protein compare
MPMX19_04681 -0.9 -1.9 5-hydroxyisourate hydrolase compare
MPMX19_01053 -0.8 -2.8 Dihydroorotase compare
MPMX19_02303 -0.8 -1.9 hypothetical protein compare
MPMX19_04145 -0.8 -1.5 hypothetical protein compare
MPMX19_00986 -0.8 -4.6 Ribonuclease D compare
MPMX19_02727 -0.8 -2.6 hypothetical protein compare
MPMX19_06508 -0.8 -2.6 Nitrilotriacetate monooxygenase component A compare
MPMX19_06337 -0.8 -2.2 Arsenic resistance transcriptional regulator ArsR1 compare
MPMX19_01499 -0.8 -3.1 hypothetical protein compare
MPMX19_00237 -0.8 -2.6 Cysteine synthase compare
MPMX19_01777 -0.8 -2.1 2-aminoadipate transaminase compare
MPMX19_04954 -0.8 -2.3 Putative hydro-lyase compare
MPMX19_00846 -0.8 -1.5 hypothetical protein compare
MPMX19_05824 -0.8 -2.5 hypothetical protein compare
MPMX19_03035 -0.8 -2.4 Protein YceI compare
MPMX19_01304 -0.7 -4.8 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX19_04392 -0.7 -1.5 Bifunctional methionine biosynthesis protein MetXA/MetW compare
MPMX19_03128 -0.7 -2.1 hypothetical protein compare
MPMX19_05393 -0.7 -1.8 hypothetical protein compare
MPMX19_01125 -0.7 -1.4 hypothetical protein compare
MPMX19_01883 -0.7 -3.4 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_03915 -0.7 -2.3 hypothetical protein compare
MPMX19_04869 -0.7 -2.6 DNA polymerase I compare
MPMX19_01884 -0.7 -2.0 Phosphoribosylformylglycinamidine synthase subunit PurQ compare
MPMX19_04347 -0.7 -2.5 ATP-dependent Clp protease proteolytic subunit compare
MPMX19_06506 -0.7 -1.6 hypothetical protein compare
MPMX19_02499 -0.7 -2.5 hypothetical protein compare
MPMX19_02095 -0.7 -1.8 Ferric uptake regulation protein compare
MPMX19_04042 -0.7 -2.3 hypothetical protein compare
MPMX19_04898 -0.7 -2.1 Transcriptional regulatory protein LnrK compare
MPMX19_00150 -0.7 -2.5 hypothetical protein compare
MPMX19_04933 -0.7 -3.1 hypothetical protein compare
MPMX19_06111 -0.7 -2.6 Non-motile and phage-resistance protein compare
MPMX19_02679 -0.7 -1.8 hypothetical protein compare
MPMX19_03599 -0.7 -3.1 2-amino-5-chloromuconic acid deaminase compare
MPMX19_06321 -0.7 -2.1 hypothetical protein compare
MPMX19_00887 -0.7 -1.5 hypothetical protein compare
MPMX19_05014 -0.7 -1.4 Cytochrome c1 compare
MPMX19_03822 -0.7 -1.3 Sulfur carrier protein FdhD compare
MPMX19_00260 -0.7 -1.1 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_05023 -0.7 -1.2 hypothetical protein compare
MPMX19_00933 -0.7 -2.2 hypothetical protein compare
MPMX19_05217 -0.6 -0.7 Flagellin compare
MPMX19_03193 -0.6 -2.6 hypothetical protein compare
MPMX19_03772 -0.6 -2.1 hypothetical protein compare
MPMX19_05808 -0.6 -3.0 NAD-dependent dihydropyrimidine dehydrogenase subunit PreA compare
MPMX19_03635 -0.6 -1.0 DNA-binding transcriptional activator DecR compare
MPMX19_02058 -0.6 -1.8 hypothetical protein compare
MPMX19_04835 -0.6 -1.8 hypothetical protein compare
MPMX19_06266 -0.6 -1.4 hypothetical protein compare
MPMX19_01597 -0.6 -1.2 23S rRNA (uridine(2479)-2'-O)-methyltransferase compare
MPMX19_00236 -0.6 -1.9 HTH-type transcriptional regulator IscR compare
MPMX19_01822 -0.6 -3.1 2-isopropylmalate synthase compare
MPMX19_06926 -0.6 -2.2 hypothetical protein compare
MPMX19_05358 -0.6 -1.3 hypothetical protein compare
MPMX19_02202 -0.6 -1.6 hypothetical protein compare
MPMX19_06084 -0.6 -2.2 Transcriptional regulatory protein LnrK compare
MPMX19_01964 -0.6 -1.5 hypothetical protein compare
MPMX19_01617 -0.6 -1.0 hypothetical protein compare
MPMX19_01249 -0.6 -1.1 Periplasmic serine endoprotease DegP compare
MPMX19_00503 -0.6 -2.4 ATP-dependent Clp protease ATP-binding subunit ClpA compare
MPMX19_00872 -0.6 -1.5 hypothetical protein compare
MPMX19_00089 -0.6 -1.3 hypothetical protein compare
MPMX19_03217 -0.6 -2.7 2-haloacrylate reductase compare
MPMX19_00025 -0.6 -1.4 hypothetical protein compare
MPMX19_04325 -0.6 -2.9 hypothetical protein compare
MPMX19_03734 -0.6 -1.3 RutC family protein YjgH compare
MPMX19_06272 -0.6 -0.7 hypothetical protein compare
MPMX19_04010 -0.6 -0.8 Isoaspartyl peptidase compare
MPMX19_01565 -0.6 -1.2 hypothetical protein compare
MPMX19_06144 -0.6 -1.2 hypothetical protein compare
MPMX19_03859 -0.6 -1.5 hypothetical protein compare
MPMX19_03594 -0.6 -2.9 Aspartate ammonia-lyase compare
MPMX19_02957 -0.6 -3.0 Ribokinase compare
MPMX19_05453 -0.6 -1.6 hypothetical protein compare
MPMX19_04571 -0.6 -1.9 hypothetical protein compare
MPMX19_03226 -0.6 -1.6 hypothetical protein compare
MPMX19_01079 -0.6 -2.4 hypothetical protein compare
MPMX19_06211 -0.6 -1.4 tRNA-Ala compare
MPMX19_03586 -0.6 -1.3 HTH-type transcriptional repressor ComR compare
MPMX19_00050 -0.6 -2.3 Pyridoxal phosphate homeostasis protein compare
MPMX19_06880 -0.6 -1.0 Validamycin A dioxygenase compare
MPMX19_03197 -0.6 -1.2 hypothetical protein compare
MPMX19_00904 -0.6 -3.3 DNA repair protein RadA compare
MPMX19_06969 -0.6 -1.3 hypothetical protein compare
MPMX19_06001 -0.6 -1.8 hypothetical protein compare
MPMX19_05119 -0.6 -4.4 Glucose-6-phosphate 1-dehydrogenase compare
MPMX19_06928 -0.6 -1.4 hypothetical protein compare
MPMX19_00696 -0.6 -2.7 Crossover junction endodeoxyribonuclease RuvC compare
MPMX19_01297 -0.6 -1.2 hypothetical protein compare
MPMX19_01314 -0.6 -2.4 hypothetical protein compare
MPMX19_05013 -0.6 -2.3 Cytochrome b compare
MPMX19_06519 -0.6 -0.9 HTH-type transcriptional repressor NagR compare
MPMX19_03081 -0.6 -1.8 Protein FecR compare
MPMX19_04316 -0.6 -2.5 hypothetical protein compare
MPMX19_06475 -0.6 -2.5 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_00576 -0.6 -1.5 hypothetical protein compare
MPMX19_02905 -0.6 -1.7 hypothetical protein compare
MPMX19_06353 -0.6 -0.7 hypothetical protein compare
MPMX19_02658 -0.6 -4.3 Glutamate synthase [NADPH] small chain compare
MPMX19_06102 -0.6 -1.7 Membrane-bound lytic murein transglycosylase C compare
MPMX19_05719 -0.6 -1.0 hypothetical protein compare
MPMX19_01560 -0.6 -1.1 3'-5' exonuclease DinG compare
MPMX19_02267 -0.6 -1.0 hypothetical protein compare
MPMX19_02965 -0.6 -1.9 hypothetical protein compare
MPMX19_06515 -0.5 -1.8 hypothetical protein compare
MPMX19_02988 -0.5 -1.3 hypothetical protein compare
MPMX19_00906 -0.5 -4.1 Amidophosphoribosyltransferase compare
MPMX19_01014 -0.5 -2.0 Indole-3-glycerol phosphate synthase compare
MPMX19_00475 -0.5 -1.1 hypothetical protein compare
MPMX19_01015 -0.5 -2.4 Anthranilate phosphoribosyltransferase compare
MPMX19_06288 -0.5 -2.3 Magnesium-transporting ATPase, P-type 1 compare
MPMX19_05727 -0.5 -3.0 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX19_03295 -0.5 -1.2 HTH-type transcriptional regulator McbR compare
MPMX19_06539 -0.5 -1.0 hypothetical protein compare
MPMX19_01277 -0.5 -2.9 hypothetical protein compare
MPMX19_05601 -0.5 -1.6 putative ABC transporter ATP-binding protein YejF compare
MPMX19_02797 -0.5 -2.3 2,3-dimethylmalate lyase compare
MPMX19_02780 -0.5 -1.8 hypothetical protein compare
MPMX19_00351 -0.5 -2.5 hypothetical protein compare
MPMX19_05044 -0.5 -0.9 hypothetical protein compare
MPMX19_06419 -0.5 -1.5 IS110 family transposase ISHne3 compare
MPMX19_03608 -0.5 -2.2 N-acetylmuramic acid 6-phosphate etherase compare
MPMX19_02531 -0.5 -1.1 hypothetical protein compare
MPMX19_03543 -0.5 -1.9 putative ABC transporter ATP-binding protein YejF compare
MPMX19_05605 -0.5 -1.4 hypothetical protein compare
MPMX19_00712 -0.5 -2.8 hypothetical protein compare
MPMX19_03739 -0.5 -1.5 hypothetical protein compare
MPMX19_01377 -0.5 -2.9 Outer membrane protein assembly factor BamA compare
MPMX19_06865 -0.5 -2.2 Leucine-responsive regulatory protein compare
MPMX19_02736 -0.5 -3.2 Tryptophan synthase beta chain compare
MPMX19_02171 -0.5 -2.5 putative ABC transporter ATP-binding protein YejF compare
MPMX19_02737 -0.5 -2.6 Tryptophan synthase alpha chain compare
MPMX19_05270 -0.5 -2.3 hypothetical protein compare
MPMX19_03613 -0.5 -1.5 N-acetylglucosamine-6-phosphate deacetylase compare
MPMX19_02397 -0.5 -1.3 hypothetical protein compare
MPMX19_00358 -0.5 -2.1 Bicarbonate transport ATP-binding protein CmpD compare
MPMX19_06267 -0.5 -1.3 hypothetical protein compare
MPMX19_04462 -0.5 -1.6 Thiamine-phosphate synthase compare
MPMX19_03578 -0.5 -1.5 HTH-type transcriptional regulator PgrR compare
MPMX19_05451 -0.5 -2.4 hypothetical protein compare
MPMX19_06921 -0.5 -1.8 hypothetical protein compare
MPMX19_04114 -0.5 -2.1 hypothetical protein compare
MPMX19_05271 -0.5 -0.8 hypothetical protein compare
MPMX19_01085 -0.5 -2.2 hypothetical protein compare
MPMX19_04013 -0.5 -1.3 hypothetical protein compare
MPMX19_04079 -0.5 -1.0 hypothetical protein compare
MPMX19_03803 -0.5 -1.4 hypothetical protein compare
MPMX19_00996 -0.5 -2.0 Metalloprotease MmpA compare
MPMX19_00714 -0.5 -2.5 Ferrous-iron efflux pump FieF compare
MPMX19_00061 -0.5 -1.4 L-lysine 2,3-aminomutase compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm; ambient oxygen experiments