Experiment set1S67 for Azospirillum sp. SherDot2

Compare to:

NL-CCM; ambient oxygen

200 most detrimental genes:

  gene name fitness t score description  
MPMX19_05690 +1.6 11.6 Protein phosphotransferase ChpT compare
MPMX19_01349 +1.5 11.7 hypothetical protein compare
MPMX19_01479 +1.4 9.1 hypothetical protein compare
MPMX19_01482 +1.3 11.5 hypothetical protein compare
MPMX19_05685 +1.3 10.2 Protein-glutamate methylesterase/protein-glutamine glutaminase 2 compare
MPMX19_01480 +1.3 6.5 hypothetical protein compare
MPMX19_02460 +1.3 11.9 Motility protein A compare
MPMX19_04225 +1.2 7.4 hypothetical protein compare
MPMX19_00438 +1.2 10.7 (R)-specific enoyl-CoA hydratase compare
MPMX19_00708 +1.2 10.4 hypothetical protein compare
MPMX19_06297 +1.2 2.9 hypothetical protein compare
MPMX19_04198 +1.2 10.4 hypothetical protein compare
MPMX19_01493 +1.1 3.5 Flagellar assembly protein FliX compare
MPMX19_05207 +1.1 3.2 Hemolysin secretion protein D, plasmid compare
MPMX19_01781 +1.1 8.4 Enoyl-[acyl-carrier-protein] reductase [NADH] FabI compare
MPMX19_06610 +1.1 2.4 hypothetical protein compare
MPMX19_04088 +1.0 4.2 Signal recognition particle 54 kDa protein compare
MPMX19_05687 +1.0 5.9 Chemotaxis protein CheW compare
MPMX19_04090 +1.0 7.6 Anaerobic nitric oxide reductase transcription regulator NorR compare
MPMX19_05623 +1.0 5.1 Photosynthetic apparatus regulatory protein RegA compare
MPMX19_03976 +1.0 4.8 hypothetical protein compare
MPMX19_00515 +1.0 7.1 hypothetical protein compare
MPMX19_05534 +1.0 1.4 DNA gyrase inhibitor YacG compare
MPMX19_03123 +0.9 2.1 Citrate lyase acyl carrier protein compare
MPMX19_00868 +0.9 8.8 Sensor kinase CckA compare
MPMX19_05688 +0.9 6.7 Sensor histidine kinase RcsC compare
MPMX19_05656 +0.9 1.9 HTH-type transcriptional activator RhaR compare
MPMX19_04207 +0.9 4.4 hypothetical protein compare
MPMX19_04622 +0.9 6.9 hypothetical protein compare
MPMX19_00852 +0.9 2.0 hypothetical protein compare
MPMX19_00212 +0.9 7.8 Nitrogen fixation regulation protein FixK compare
MPMX19_01486 +0.9 6.8 Flagellar L-ring protein compare
MPMX19_05679 +0.9 6.6 Flagellum-specific ATP synthase compare
MPMX19_01481 +0.9 6.7 Flagellar motor switch protein FliM compare
MPMX19_02815 +0.9 3.0 2-keto-4-pentenoate hydratase compare
MPMX19_04563 +0.8 2.3 hypothetical protein compare
MPMX19_02746 +0.8 6.2 Peptidyl-lysine N-acetyltransferase Pat compare
MPMX19_06510 +0.8 2.4 Aliphatic sulfonates import ATP-binding protein SsuB compare
MPMX19_05622 +0.8 6.5 Sensor histidine kinase RegB compare
MPMX19_04258 +0.8 2.6 hypothetical protein compare
MPMX19_01485 +0.8 6.8 hypothetical protein compare
MPMX19_02816 +0.8 3.1 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_04095 +0.8 3.6 hypothetical protein compare
MPMX19_03195 +0.8 1.6 hypothetical protein compare
MPMX19_05686 +0.8 3.0 Chemotaxis protein CheY compare
MPMX19_04199 +0.8 6.0 Pseudaminic acid synthase compare
MPMX19_04624 +0.8 5.9 hypothetical protein compare
MPMX19_03757 +0.8 2.3 D-ribose pyranase compare
MPMX19_06585 +0.8 7.3 hypothetical protein compare
MPMX19_01494 +0.8 6.0 Flagellar P-ring protein compare
MPMX19_06381 +0.8 1.3 putative manganese efflux pump MntP compare
MPMX19_04204 +0.8 5.7 D-alanine--D-alanyl carrier protein ligase compare
MPMX19_06180 +0.7 2.2 Sensor histidine kinase RegB compare
MPMX19_00864 +0.7 3.9 Flagellar hook-basal body complex protein FliE compare
MPMX19_01075 +0.7 2.2 Molybdopterin synthase sulfur carrier subunit compare
MPMX19_04212 +0.7 6.3 Photosystem I assembly protein Ycf3 compare
MPMX19_01484 +0.7 4.7 Flagellar basal-body rod protein FlgG compare
MPMX19_05581 +0.7 1.9 hypothetical protein compare
MPMX19_06545 +0.7 6.5 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase compare
MPMX19_06544 +0.7 6.1 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) compare
MPMX19_00544 +0.7 1.7 hypothetical protein compare
MPMX19_00689 +0.7 1.9 Glyceraldehyde-3-phosphate dehydrogenase 1 compare
MPMX19_04206 +0.7 3.8 3-oxoacyl-[acyl-carrier-protein] synthase 3 compare
MPMX19_00211 +0.7 2.8 putative copper-importing P-type ATPase A compare
MPMX19_06577 +0.7 5.3 hypothetical protein compare
MPMX19_05379 +0.7 2.5 hypothetical protein compare
MPMX19_00311 +0.7 6.2 hypothetical protein compare
MPMX19_02039 +0.7 3.6 hypothetical protein compare
MPMX19_04209 +0.7 5.8 Lipopolysaccharide assembly protein B compare
MPMX19_00240 +0.7 1.9 hypothetical protein compare
MPMX19_06582 +0.7 5.8 hypothetical protein compare
MPMX19_00854 +0.7 6.1 hypothetical protein compare
MPMX19_04224 +0.6 6.1 hypothetical protein compare
MPMX19_04623 +0.6 3.6 hypothetical protein compare
MPMX19_00066 +0.6 1.0 hypothetical protein compare
MPMX19_06581 +0.6 4.7 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 2 compare
MPMX19_05586 +0.6 1.3 hypothetical protein compare
MPMX19_06584 +0.6 5.9 Asparagine synthetase [glutamine-hydrolyzing] 1 compare
MPMX19_00112 +0.6 2.4 Multidrug transporter EmrE compare
MPMX19_06930 +0.6 1.8 Sensor kinase CckA compare
MPMX19_05678 +0.6 4.3 hypothetical protein compare
MPMX19_05254 +0.6 1.3 Carbon monoxide dehydrogenase small chain compare
MPMX19_05906 +0.6 1.3 hypothetical protein compare
MPMX19_03667 +0.6 2.7 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_06281 +0.6 2.7 hypothetical protein compare
MPMX19_05352 +0.6 1.6 putative cysteine-rich protein YhjQ compare
MPMX19_06580 +0.6 3.7 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_00725 +0.6 3.6 Transcriptional regulatory protein ros compare
MPMX19_00207 +0.6 3.3 hypothetical protein compare
MPMX19_03800 +0.6 2.1 hypothetical protein compare
MPMX19_04205 +0.6 2.1 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_04222 +0.6 5.2 hypothetical protein compare
MPMX19_04531 +0.6 2.1 hypothetical protein compare
MPMX19_03846 +0.6 1.8 hypothetical protein compare
MPMX19_02034 +0.6 2.3 Peptidoglycan-associated lipoprotein compare
MPMX19_06644 +0.6 5.2 GDP-mannose 4,6-dehydratase compare
MPMX19_02379 +0.6 2.7 hypothetical protein compare
MPMX19_01483 +0.6 4.5 Flagellar basal-body rod protein FlgG compare
MPMX19_04089 +0.6 4.9 Flagellar biosynthesis protein FlhA compare
MPMX19_02735 +0.6 1.9 Sensor histidine kinase RcsC compare
MPMX19_02668 +0.6 3.9 RNA polymerase sigma-54 factor 2 compare
MPMX19_05714 +0.6 3.9 hypothetical protein compare
MPMX19_01949 +0.6 4.9 Chemotaxis protein CheW compare
MPMX19_04638 +0.5 1.2 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_01012 +0.5 1.6 Cyclic pyranopterin monophosphate synthase compare
MPMX19_05745 +0.5 4.1 Sensor histidine kinase RcsC compare
MPMX19_06966 +0.5 1.3 hypothetical protein compare
MPMX19_06578 +0.5 3.8 hypothetical protein compare
MPMX19_06734 +0.5 4.8 Alginate biosynthesis protein AlgA compare
MPMX19_01243 +0.5 1.4 hypothetical protein compare
MPMX19_00839 +0.5 1.2 hypothetical protein compare
MPMX19_04223 +0.5 4.6 hypothetical protein compare
MPMX19_03095 +0.5 1.7 hypothetical protein compare
MPMX19_05483 +0.5 1.9 hypothetical protein compare
MPMX19_02094 +0.5 2.2 hypothetical protein compare
MPMX19_00166 +0.5 1.4 hypothetical protein compare
MPMX19_05618 +0.5 2.2 putative manganese efflux pump MntP compare
MPMX19_00867 +0.5 4.5 Flagellar biosynthetic protein FlhB compare
MPMX19_04058 +0.5 1.8 Aldehyde oxidoreductase iron-sulfur-binding subunit PaoA compare
MPMX19_04766 +0.5 2.5 Glycine cleavage system transcriptional activator compare
MPMX19_00244 +0.5 2.4 hypothetical protein compare
MPMX19_01948 +0.5 4.0 Chemotaxis protein CheA compare
MPMX19_03868 +0.5 2.2 Xylitol-binding protein compare
MPMX19_01438 +0.5 2.2 hypothetical protein compare
MPMX19_01283 +0.5 1.3 hypothetical protein compare
MPMX19_03549 +0.5 1.6 HTH-type transcriptional regulator PgrR compare
MPMX19_01645 +0.5 1.4 HTH-type transcriptional regulator GltC compare
MPMX19_04093 +0.5 2.2 hypothetical protein compare
MPMX19_04508 +0.5 1.7 Phosphoglycolate phosphatase compare
MPMX19_06866 +0.5 1.3 HTH-type transcriptional regulator NimR compare
MPMX19_01614 +0.5 1.3 hypothetical protein compare
MPMX19_01864 +0.5 1.0 Regulatory protein AtoC compare
MPMX19_01605 +0.5 3.2 Chemotaxis protein CheY compare
MPMX19_04579 +0.5 2.0 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX19_01618 +0.5 3.9 hypothetical protein compare
MPMX19_05011 +0.5 2.0 tRNA (cytidine(34)-2'-O)-methyltransferase compare
MPMX19_01257 +0.5 2.4 hypothetical protein compare
MPMX19_00297 +0.5 1.2 4-carboxy-4-hydroxy-2-oxoadipate aldolase compare
MPMX19_03169 +0.5 0.9 Dihydroanticapsin 7-dehydrogenase compare
MPMX19_04492 +0.5 1.5 hypothetical protein compare
MPMX19_02382 +0.5 2.2 hypothetical protein compare
MPMX19_00208 +0.5 1.3 hypothetical protein compare
MPMX19_05684 +0.5 2.9 Chemotaxis protein methyltransferase 1 compare
MPMX19_00318 +0.5 2.4 hypothetical protein compare
MPMX19_03126 +0.5 1.7 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase compare
MPMX19_00851 +0.5 3.1 hypothetical protein compare
MPMX19_04670 +0.5 2.1 hypothetical protein compare
MPMX19_01858 +0.5 3.0 Alkaline phosphatase synthesis transcriptional regulatory protein PhoP compare
MPMX19_01178 +0.5 4.1 hypothetical protein compare
MPMX19_06886 +0.5 2.5 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_02514 +0.5 0.7 hypothetical protein compare
MPMX19_03582 +0.5 2.4 Response regulator protein TmoT compare
MPMX19_05038 +0.5 2.0 ATP synthase epsilon chain compare
MPMX19_03127 +0.5 1.9 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase compare
MPMX19_04276 +0.5 1.6 hypothetical protein compare
MPMX19_06874 +0.5 1.2 hypothetical protein compare
MPMX19_06646 +0.5 1.7 hypothetical protein compare
MPMX19_06099 +0.4 3.6 hypothetical protein compare
MPMX19_04200 +0.4 2.6 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase compare
MPMX19_01957 +0.4 3.4 Sensor histidine kinase RcsC compare
MPMX19_05554 +0.4 1.6 hypothetical protein compare
MPMX19_03100 +0.4 1.8 hypothetical protein compare
MPMX19_02424 +0.4 1.6 hypothetical protein compare
MPMX19_01059 +0.4 0.8 hypothetical protein compare
MPMX19_01067 +0.4 0.8 hypothetical protein compare
MPMX19_06329 +0.4 1.9 hypothetical protein compare
MPMX19_02937 +0.4 1.2 hypothetical protein compare
MPMX19_02835 +0.4 2.1 Phosphoribosyl-dephospho-CoA transferase compare
MPMX19_03342 +0.4 0.9 hypothetical protein compare
MPMX19_02769 +0.4 2.0 Ribokinase compare
MPMX19_05882 +0.4 1.9 hypothetical protein compare
MPMX19_06193 +0.4 1.1 Flagellar hook-basal body complex protein FliE compare
MPMX19_06471 +0.4 2.0 Glyoxylate/hydroxypyruvate reductase A compare
MPMX19_06594 +0.4 3.9 hypothetical protein compare
MPMX19_06776 +0.4 2.0 hypothetical protein compare
MPMX19_06878 +0.4 1.5 Putative amino-acid ABC transporter-binding protein YhdW compare
MPMX19_05104 +0.4 0.8 hypothetical protein compare
MPMX19_03509 +0.4 1.6 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic compare
MPMX19_03569 +0.4 2.0 hypothetical protein compare
MPMX19_02768 +0.4 1.2 Ribose operon repressor compare
MPMX19_00294 +0.4 2.0 Adaptive-response sensory-kinase SasA compare
MPMX19_06235 +0.4 1.6 Glycine cleavage system transcriptional activator compare
MPMX19_03655 +0.4 1.0 hypothetical protein compare
MPMX19_05733 +0.4 1.5 Biopolymer transport protein ExbD compare
MPMX19_04633 +0.4 1.7 hypothetical protein compare
MPMX19_02565 +0.4 3.9 hypothetical protein compare
MPMX19_06778 +0.4 2.1 HTH-type transcriptional regulator YhaJ compare
MPMX19_01755 +0.4 1.8 hypothetical protein compare
MPMX19_06106 +0.4 2.1 Bacteriohemerythrin compare
MPMX19_05818 +0.4 1.2 hypothetical protein compare
MPMX19_01190 +0.4 1.8 Response regulator receiver protein CpdR compare
MPMX19_05459 +0.4 1.1 hypothetical protein compare
MPMX19_00204 +0.4 1.6 hypothetical protein compare
MPMX19_00766 +0.4 1.1 hypothetical protein compare
MPMX19_02366 +0.4 2.6 hypothetical protein compare
MPMX19_06901 +0.4 2.2 Alpha-ketoglutaric semialdehyde dehydrogenase compare
MPMX19_00472 +0.4 1.1 Protein HesB, heterocyst compare
MPMX19_01794 +0.4 1.6 Putative cysteine protease YraA compare
MPMX19_05313 +0.4 1.3 4,4'-diapolycopene aldehyde oxidase compare
MPMX19_02613 +0.4 1.0 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm; ambient oxygen experiments