Experiment set1S66 for Azospirillum sp. SherDot2

Compare to:

NL-CCM; high oxygen

200 most important genes:

  gene name fitness t score description  
MPMX19_00126 -2.2 -3.8 hypothetical protein compare
MPMX19_04615 -2.0 -2.7 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_06179 -2.0 -2.7 putative SURF1-like protein compare
MPMX19_00608 -1.9 -1.6 hypothetical protein compare
MPMX19_02543 -1.7 -2.5 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX19_04115 -1.7 -1.3 Sensor histidine kinase RcsC compare
MPMX19_02980 -1.7 -2.2 Hydrogen cyanide synthase subunit HcnA compare
MPMX19_02303 -1.7 -3.1 hypothetical protein compare
MPMX19_00841 -1.7 -2.4 Holo-[acyl-carrier-protein] synthase compare
MPMX19_00129 -1.6 -1.8 hypothetical protein compare
MPMX19_06723 -1.6 -4.1 hypothetical protein compare
MPMX19_05825 -1.6 -3.1 hypothetical protein compare
MPMX19_06969 -1.5 -3.3 hypothetical protein compare
MPMX19_03906 -1.5 -10.5 Pca regulon regulatory protein compare
MPMX19_00530 -1.4 -3.5 Orotate phosphoribosyltransferase compare
MPMX19_00237 -1.4 -3.7 Cysteine synthase compare
MPMX19_03472 -1.3 -2.7 Fatty acid metabolism regulator protein compare
MPMX19_00128 -1.3 -8.4 hypothetical protein compare
MPMX19_00838 -1.3 -2.9 GTP pyrophosphokinase rsh compare
MPMX19_00447 -1.3 -3.3 hypothetical protein compare
MPMX19_05725 -1.3 -1.9 hypothetical protein compare
MPMX19_06862 -1.3 -2.7 hypothetical protein compare
MPMX19_06546 -1.3 -2.6 hypothetical protein compare
MPMX19_02511 -1.3 -2.0 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase compare
MPMX19_02664 -1.3 -1.8 Arabinose 5-phosphate isomerase KdsD compare
MPMX19_03609 -1.2 -2.4 HTH-type transcriptional repressor NagR compare
MPMX19_01054 -1.2 -4.6 Aspartate carbamoyltransferase compare
MPMX19_03822 -1.2 -1.8 Sulfur carrier protein FdhD compare
MPMX19_03329 -1.2 -2.7 hypothetical protein compare
MPMX19_04681 -1.1 -2.7 5-hydroxyisourate hydrolase compare
MPMX19_05044 -1.1 -2.0 hypothetical protein compare
MPMX19_01053 -1.1 -3.2 Dihydroorotase compare
MPMX19_02267 -1.1 -1.6 hypothetical protein compare
MPMX19_00976 -1.1 -1.9 ATP-dependent RNA helicase RhlE compare
MPMX19_03634 -1.1 -2.5 Arginase compare
MPMX19_06272 -1.1 -1.1 hypothetical protein compare
MPMX19_01297 -1.0 -1.8 hypothetical protein compare
MPMX19_01394 -1.0 -1.0 hypothetical protein compare
MPMX19_02981 -1.0 -4.0 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_01014 -1.0 -3.2 Indole-3-glycerol phosphate synthase compare
MPMX19_01630 -1.0 -2.7 Phosphoribosylamine--glycine ligase compare
MPMX19_01491 -1.0 -2.0 hypothetical protein compare
MPMX19_01597 -0.9 -1.7 23S rRNA (uridine(2479)-2'-O)-methyltransferase compare
MPMX19_06916 -0.9 -1.6 Crotonyl-CoA hydratase compare
MPMX19_05624 -0.9 -1.4 hypothetical protein compare
MPMX19_01365 -0.9 -2.1 hypothetical protein compare
MPMX19_01720 -0.9 -2.3 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB compare
MPMX19_01304 -0.9 -5.5 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX19_02950 -0.9 -3.4 Deoxyribose operon repressor compare
MPMX19_00089 -0.9 -2.3 hypothetical protein compare
MPMX19_00236 -0.9 -2.5 HTH-type transcriptional regulator IscR compare
MPMX19_05271 -0.9 -1.6 hypothetical protein compare
MPMX19_01314 -0.9 -3.8 hypothetical protein compare
MPMX19_06985 -0.9 -1.8 L-malyl-CoA/beta-methylmalyl-CoA lyase compare
MPMX19_00714 -0.9 -3.9 Ferrous-iron efflux pump FieF compare
MPMX19_03586 -0.9 -2.3 HTH-type transcriptional repressor ComR compare
MPMX19_03452 -0.8 -2.4 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_06102 -0.8 -2.2 Membrane-bound lytic murein transglycosylase C compare
MPMX19_01395 -0.8 -1.8 hypothetical protein compare
MPMX19_04210 -0.8 -1.2 hypothetical protein compare
MPMX19_00503 -0.8 -2.9 ATP-dependent Clp protease ATP-binding subunit ClpA compare
MPMX19_02680 -0.8 -3.9 hypothetical protein compare
MPMX19_00933 -0.8 -2.2 hypothetical protein compare
MPMX19_01617 -0.8 -1.2 hypothetical protein compare
MPMX19_00695 -0.8 -1.9 putative transcriptional regulatory protein compare
MPMX19_03196 -0.8 -2.0 hypothetical protein compare
MPMX19_04958 -0.8 -1.8 Methyl-accepting chemotaxis protein compare
MPMX19_04937 -0.8 -2.0 Mannosyl-D-glycerate transport/metabolism system repressor MngR compare
MPMX19_04010 -0.8 -1.9 Isoaspartyl peptidase compare
MPMX19_02613 -0.8 -1.7 hypothetical protein compare
MPMX19_04461 -0.8 -3.0 HTH-type transcriptional repressor RspR compare
MPMX19_03423 -0.8 -2.6 hypothetical protein compare
MPMX19_01610 -0.8 -1.7 ATP-dependent DNA helicase PcrA compare
MPMX19_04644 -0.8 -1.7 hypothetical protein compare
MPMX19_00304 -0.8 -1.8 Phosphatidylcholine synthase compare
MPMX19_06763 -0.8 -2.3 hypothetical protein compare
MPMX19_00680 -0.8 -1.5 Elongation factor P--(R)-beta-lysine ligase compare
MPMX19_06419 -0.8 -1.6 IS110 family transposase ISHne3 compare
MPMX19_00705 -0.8 -2.0 Cell division coordinator CpoB compare
MPMX19_03353 -0.7 -2.7 hypothetical protein compare
MPMX19_03959 -0.7 -1.0 hypothetical protein compare
MPMX19_00794 -0.7 -2.1 Transcriptional activator protein CopR compare
MPMX19_00953 -0.7 -2.9 hypothetical protein compare
MPMX19_03613 -0.7 -2.1 N-acetylglucosamine-6-phosphate deacetylase compare
MPMX19_00260 -0.7 -1.2 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_03042 -0.7 -2.8 hypothetical protein compare
MPMX19_01834 -0.7 -1.3 hypothetical protein compare
MPMX19_02116 -0.7 -1.6 Cold shock protein CspA compare
MPMX19_01067 -0.7 -1.4 hypothetical protein compare
MPMX19_01560 -0.7 -1.7 3'-5' exonuclease DinG compare
MPMX19_05393 -0.7 -2.1 hypothetical protein compare
MPMX19_02207 -0.7 -1.9 N-(5'-phosphoribosyl)anthranilate isomerase compare
MPMX19_02514 -0.7 -1.0 hypothetical protein compare
MPMX19_05831 -0.7 -1.9 Protein/nucleic acid deglycase 2 compare
MPMX19_01075 -0.7 -1.4 Molybdopterin synthase sulfur carrier subunit compare
MPMX19_00996 -0.7 -2.7 Metalloprotease MmpA compare
MPMX19_02516 -0.7 -2.6 hypothetical protein compare
MPMX19_02714 -0.7 -1.3 hypothetical protein compare
MPMX19_01117 -0.7 -2.4 GTPase HflX compare
MPMX19_05358 -0.7 -1.3 hypothetical protein compare
MPMX19_06306 -0.7 -2.3 hypothetical protein compare
MPMX19_01777 -0.7 -1.8 2-aminoadipate transaminase compare
MPMX19_06892 -0.7 -2.0 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_03635 -0.7 -1.1 DNA-binding transcriptional activator DecR compare
MPMX19_02268 -0.7 -2.2 hypothetical protein compare
MPMX19_05779 -0.7 -1.8 Beta-ketoadipyl-CoA thiolase compare
MPMX19_06928 -0.7 -1.6 hypothetical protein compare
MPMX19_02551 -0.7 -1.6 hypothetical protein compare
MPMX19_00329 -0.7 -2.5 Putative membrane protein insertion efficiency factor compare
MPMX19_03871 -0.7 -1.5 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_01377 -0.7 -3.7 Outer membrane protein assembly factor BamA compare
MPMX19_06202 -0.7 -1.4 hypothetical protein compare
MPMX19_02737 -0.7 -3.3 Tryptophan synthase alpha chain compare
MPMX19_02905 -0.7 -1.8 hypothetical protein compare
MPMX19_01201 -0.7 -1.7 hypothetical protein compare
MPMX19_05162 -0.6 -2.1 Ferrous-iron efflux pump FieF compare
MPMX19_03787 -0.6 -1.4 hypothetical protein compare
MPMX19_04616 -0.6 -2.1 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_00131 -0.6 -1.4 hypothetical protein compare
MPMX19_05719 -0.6 -1.5 hypothetical protein compare
MPMX19_00906 -0.6 -4.8 Amidophosphoribosyltransferase compare
MPMX19_04869 -0.6 -2.4 DNA polymerase I compare
MPMX19_02320 -0.6 -1.2 HTH-type transcriptional regulator GltR compare
MPMX19_01084 -0.6 -2.2 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX19_02527 -0.6 -2.1 hypothetical protein compare
MPMX19_04145 -0.6 -1.1 hypothetical protein compare
MPMX19_02058 -0.6 -1.7 hypothetical protein compare
MPMX19_00120 -0.6 -2.0 hypothetical protein compare
MPMX19_00606 -0.6 -3.0 3-isopropylmalate dehydratase small subunit 1 compare
MPMX19_05217 -0.6 -1.1 Flagellin compare
MPMX19_05448 -0.6 -1.8 DNA-invertase hin compare
MPMX19_00840 -0.6 -1.9 Pyridoxine 5'-phosphate synthase compare
MPMX19_02657 -0.6 -5.2 Glutamate synthase [NADPH] large chain compare
MPMX19_04842 -0.6 -1.7 Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase compare
MPMX19_01545 -0.6 -0.9 Lon protease compare
MPMX19_06790 -0.6 -1.4 D-amino acid dehydrogenase compare
MPMX19_02105 -0.6 -1.4 hypothetical protein compare
MPMX19_05906 -0.6 -1.2 hypothetical protein compare
MPMX19_05111 -0.6 -1.4 PqqA binding protein compare
MPMX19_05355 -0.6 -2.0 Transcriptional regulator SlyA compare
MPMX19_03788 -0.6 -2.6 hypothetical protein compare
MPMX19_02573 -0.6 -2.0 Dihydrofolate reductase compare
MPMX19_04610 -0.6 -1.5 putative enoyl-CoA hydratase 1 compare
MPMX19_00432 -0.6 -2.1 hypothetical protein compare
MPMX19_02809 -0.6 -1.4 D-erythronate kinase compare
MPMX19_00511 -0.6 -2.1 hypothetical protein compare
MPMX19_06137 -0.6 -1.6 hypothetical protein compare
MPMX19_05727 -0.6 -2.9 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX19_04535 -0.6 -1.5 Maleate isomerase compare
MPMX19_00235 -0.6 -2.5 hypothetical protein compare
MPMX19_00839 -0.6 -1.2 hypothetical protein compare
MPMX19_06258 -0.6 -1.6 hypothetical protein compare
MPMX19_05362 -0.6 -1.0 hypothetical protein compare
MPMX19_01585 -0.6 -1.5 Zinc uptake regulation protein compare
MPMX19_04890 -0.6 -2.4 hypothetical protein compare
MPMX19_04701 -0.6 -1.0 Transcriptional regulatory protein FixJ compare
MPMX19_04996 -0.6 -1.5 hypothetical protein compare
MPMX19_06014 -0.6 -3.1 Histidinol-phosphate aminotransferase compare
MPMX19_05798 -0.6 -1.2 HTH-type transcriptional repressor NanR compare
MPMX19_06567 -0.6 -1.5 hypothetical protein compare
MPMX19_03369 -0.6 -1.2 hypothetical protein compare
MPMX19_06488 -0.6 -1.3 Taurine-binding periplasmic protein compare
MPMX19_03806 -0.6 -1.3 hypothetical protein compare
MPMX19_05445 -0.5 -1.0 tRNA-Glu compare
MPMX19_06414 -0.5 -1.6 hypothetical protein compare
MPMX19_05100 -0.5 -1.7 hypothetical protein compare
MPMX19_06028 -0.5 -1.7 hypothetical protein compare
MPMX19_04577 -0.5 -2.0 putative glycosyltransferase compare
MPMX19_03800 -0.5 -1.0 hypothetical protein compare
MPMX19_03063 -0.5 -1.5 hypothetical protein compare
MPMX19_02768 -0.5 -1.4 Ribose operon repressor compare
MPMX19_01883 -0.5 -3.0 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_02811 -0.5 -1.9 Long-chain-alcohol dehydrogenase 1 compare
MPMX19_02057 -0.5 -1.1 hypothetical protein compare
MPMX19_06470 -0.5 -1.4 4-hydroxy-3-prenylphenylpyruvate oxygenase/4-hydroxy-3-prenylbenzoate synthase compare
MPMX19_01248 -0.5 -1.9 hypothetical protein compare
MPMX19_04359 -0.5 -1.3 Ferredoxin, 2Fe-2S compare
MPMX19_04161 -0.5 -1.3 hypothetical protein compare
MPMX19_02803 -0.5 -1.6 putative FAD-linked oxidoreductase compare
MPMX19_02181 -0.5 -1.3 hypothetical protein compare
MPMX19_00694 -0.5 -1.2 2',3'-cyclic-nucleotide 2'-phosphodiesterase compare
MPMX19_04081 -0.5 -0.9 hypothetical protein compare
MPMX19_00482 -0.5 -2.0 Sensor histidine kinase RcsC compare
MPMX19_05292 -0.5 -2.3 hypothetical protein compare
MPMX19_02702 -0.5 -1.8 hypothetical protein compare
MPMX19_02118 -0.5 -1.5 hypothetical protein compare
MPMX19_03085 -0.5 -1.3 Hydrogen peroxide-inducible genes activator compare
MPMX19_00050 -0.5 -1.9 Pyridoxal phosphate homeostasis protein compare
MPMX19_03031 -0.5 -2.8 hypothetical protein compare
MPMX19_03264 -0.5 -2.2 hypothetical protein compare
MPMX19_05733 -0.5 -1.0 Biopolymer transport protein ExbD compare
MPMX19_02544 -0.5 -1.7 hypothetical protein compare
MPMX19_06440 -0.5 -2.5 ISNCY family transposase ISBli29 compare
MPMX19_00182 -0.5 -0.9 hypothetical protein compare
MPMX19_05119 -0.5 -3.8 Glucose-6-phosphate 1-dehydrogenase compare
MPMX19_06824 -0.5 -1.5 Flavin-dependent trigonelline monooxygenase, reductase component compare
MPMX19_04953 -0.5 -1.2 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_03425 -0.5 -0.6 hypothetical protein compare
MPMX19_04391 -0.5 -2.9 Homoserine O-acetyltransferase compare
MPMX19_04462 -0.5 -1.8 Thiamine-phosphate synthase compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm; high oxygen experiments