Experiment set1S65 for Azospirillum sp. SherDot2

Compare to:

NL-CCM; high oxygen

200 most important genes:

  gene name fitness t score description  
MPMX19_02980 -2.1 -3.0 Hydrogen cyanide synthase subunit HcnA compare
MPMX19_02136 -1.8 -2.2 Phage shock protein A compare
MPMX19_02801 -1.7 -2.5 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_06351 -1.5 -3.0 Arsenate reductase compare
MPMX19_00182 -1.5 -2.8 hypothetical protein compare
MPMX19_02531 -1.4 -1.9 hypothetical protein compare
MPMX19_02303 -1.4 -2.9 hypothetical protein compare
MPMX19_00128 -1.4 -8.9 hypothetical protein compare
MPMX19_01113 -1.3 -2.5 Adaptive-response sensory-kinase SasA compare
MPMX19_00608 -1.2 -1.3 hypothetical protein compare
MPMX19_05719 -1.2 -2.2 hypothetical protein compare
MPMX19_00304 -1.2 -2.8 Phosphatidylcholine synthase compare
MPMX19_01054 -1.2 -4.7 Aspartate carbamoyltransferase compare
MPMX19_05016 -1.2 -2.0 Sensor histidine kinase RcsC compare
MPMX19_01616 -1.1 -2.5 hypothetical protein compare
MPMX19_01597 -1.1 -2.3 23S rRNA (uridine(2479)-2'-O)-methyltransferase compare
MPMX19_06490 -1.1 -1.9 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_00236 -1.1 -2.9 HTH-type transcriptional regulator IscR compare
MPMX19_01243 -1.1 -1.9 hypothetical protein compare
MPMX19_01053 -1.1 -3.3 Dihydroorotase compare
MPMX19_02235 -1.1 -3.4 tRNA-Ala compare
MPMX19_00237 -1.0 -3.2 Cysteine synthase compare
MPMX19_01748 -1.0 -2.3 hypothetical protein compare
MPMX19_03906 -1.0 -7.5 Pca regulon regulatory protein compare
MPMX19_06123 -1.0 -1.5 hypothetical protein compare
MPMX19_05111 -1.0 -2.9 PqqA binding protein compare
MPMX19_04898 -1.0 -2.6 Transcriptional regulatory protein LnrK compare
MPMX19_01918 -1.0 -1.3 tRNA-Ala compare
MPMX19_04903 -1.0 -3.2 hypothetical protein compare
MPMX19_03306 -1.0 -2.8 hypothetical protein compare
MPMX19_00234 -0.9 -2.6 hypothetical protein compare
MPMX19_04954 -0.9 -2.8 Putative hydro-lyase compare
MPMX19_05100 -0.9 -1.9 hypothetical protein compare
MPMX19_02202 -0.9 -2.1 hypothetical protein compare
MPMX19_04171 -0.9 -2.1 16S ribosomal RNA compare
MPMX19_00978 -0.9 -2.0 hypothetical protein compare
MPMX19_01883 -0.9 -4.5 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_03165 -0.9 -2.0 hypothetical protein compare
MPMX19_06090 -0.9 -1.3 Pyruvate dehydrogenase complex repressor compare
MPMX19_02466 -0.9 -1.6 Octopine permease ATP-binding protein P compare
MPMX19_01277 -0.9 -4.9 hypothetical protein compare
MPMX19_01796 -0.9 -1.0 hypothetical protein compare
MPMX19_05921 -0.9 -1.8 hypothetical protein compare
MPMX19_01201 -0.9 -2.3 hypothetical protein compare
MPMX19_00530 -0.9 -2.3 Orotate phosphoribosyltransferase compare
MPMX19_01426 -0.9 -1.3 hypothetical protein compare
MPMX19_00131 -0.9 -2.2 hypothetical protein compare
MPMX19_01423 -0.8 -2.1 hypothetical protein compare
MPMX19_01125 -0.8 -1.7 hypothetical protein compare
MPMX19_02543 -0.8 -1.6 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX19_06862 -0.8 -2.1 hypothetical protein compare
MPMX19_02267 -0.8 -1.3 hypothetical protein compare
MPMX19_06044 -0.8 -1.2 hypothetical protein compare
MPMX19_01314 -0.8 -3.9 hypothetical protein compare
MPMX19_04115 -0.8 -1.0 Sensor histidine kinase RcsC compare
MPMX19_00297 -0.8 -1.4 4-carboxy-4-hydroxy-2-oxoadipate aldolase compare
MPMX19_00714 -0.8 -4.2 Ferrous-iron efflux pump FieF compare
MPMX19_05605 -0.8 -1.8 hypothetical protein compare
MPMX19_03448 -0.8 -2.6 hypothetical protein compare
MPMX19_02516 -0.8 -3.2 hypothetical protein compare
MPMX19_01718 -0.8 -1.5 Ribosomal large subunit pseudouridine synthase C compare
MPMX19_02164 -0.8 -2.4 NADH pyrophosphatase compare
MPMX19_00976 -0.8 -1.8 ATP-dependent RNA helicase RhlE compare
MPMX19_03734 -0.8 -1.1 RutC family protein YjgH compare
MPMX19_06560 -0.8 -3.7 hypothetical protein compare
MPMX19_04079 -0.8 -1.0 hypothetical protein compare
MPMX19_01249 -0.8 -1.3 Periplasmic serine endoprotease DegP compare
MPMX19_02553 -0.8 -3.3 Protein-export protein SecB compare
MPMX19_00126 -0.8 -1.6 hypothetical protein compare
MPMX19_00609 -0.8 -2.2 Chemotaxis protein CheY compare
MPMX19_05934 -0.7 -2.1 Arylesterase compare
MPMX19_02951 -0.7 -1.6 Deoxyribose-phosphate aldolase 1 compare
MPMX19_00748 -0.7 -2.7 Organic hydroperoxide resistance transcriptional regulator compare
MPMX19_01084 -0.7 -3.0 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX19_04950 -0.7 -3.2 High-affinity branched-chain amino acid transport system permease protein LivH compare
MPMX19_00576 -0.7 -1.8 hypothetical protein compare
MPMX19_05831 -0.7 -2.2 Protein/nucleic acid deglycase 2 compare
MPMX19_02950 -0.7 -3.0 Deoxyribose operon repressor compare
MPMX19_05271 -0.7 -1.6 hypothetical protein compare
MPMX19_03722 -0.7 -1.1 hypothetical protein compare
MPMX19_04466 -0.7 -2.0 hypothetical protein compare
MPMX19_01304 -0.7 -4.4 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX19_00141 -0.7 -2.3 hypothetical protein compare
MPMX19_06102 -0.7 -1.8 Membrane-bound lytic murein transglycosylase C compare
MPMX19_01560 -0.7 -1.9 3'-5' exonuclease DinG compare
MPMX19_00503 -0.7 -2.7 ATP-dependent Clp protease ATP-binding subunit ClpA compare
MPMX19_01014 -0.7 -2.9 Indole-3-glycerol phosphate synthase compare
MPMX19_01400 -0.7 -1.7 hypothetical protein compare
MPMX19_03552 -0.7 -1.9 hypothetical protein compare
MPMX19_03389 -0.7 -1.8 Carbon monoxide dehydrogenase small chain compare
MPMX19_03609 -0.7 -1.9 HTH-type transcriptional repressor NagR compare
MPMX19_04390 -0.7 -1.3 hypothetical protein compare
MPMX19_06985 -0.7 -1.5 L-malyl-CoA/beta-methylmalyl-CoA lyase compare
MPMX19_01822 -0.7 -3.4 2-isopropylmalate synthase compare
MPMX19_06967 -0.7 -1.3 hypothetical protein compare
MPMX19_03975 -0.7 -2.2 Putative thiosulfate sulfurtransferase compare
MPMX19_03096 -0.7 -1.3 hypothetical protein compare
MPMX19_02613 -0.7 -1.5 hypothetical protein compare
MPMX19_05387 -0.7 -1.8 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
MPMX19_04013 -0.7 -2.3 hypothetical protein compare
MPMX19_05252 -0.7 -2.1 Carbon monoxide dehydrogenase medium chain compare
MPMX19_06662 -0.7 -4.4 Ubiquinone biosynthesis O-methyltransferase, mitochondrial compare
MPMX19_02737 -0.6 -3.4 Tryptophan synthase alpha chain compare
MPMX19_00906 -0.6 -5.1 Amidophosphoribosyltransferase compare
MPMX19_05014 -0.6 -1.5 Cytochrome c1 compare
MPMX19_00320 -0.6 -1.6 hypothetical protein compare
MPMX19_04696 -0.6 -1.9 Na(+)/H(+) antiporter subunit C1 compare
MPMX19_01714 -0.6 -1.2 tRNA-modifying protein YgfZ compare
MPMX19_01777 -0.6 -1.9 2-aminoadipate transaminase compare
MPMX19_02745 -0.6 -1.8 putative nicotinate-nucleotide pyrophosphorylase [carboxylating] compare
MPMX19_03295 -0.6 -1.2 HTH-type transcriptional regulator McbR compare
MPMX19_00511 -0.6 -2.3 hypothetical protein compare
MPMX19_02657 -0.6 -5.5 Glutamate synthase [NADPH] large chain compare
MPMX19_03787 -0.6 -1.1 hypothetical protein compare
MPMX19_02916 -0.6 -2.2 hypothetical protein compare
MPMX19_05727 -0.6 -3.4 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX19_00705 -0.6 -1.8 Cell division coordinator CpoB compare
MPMX19_01297 -0.6 -1.3 hypothetical protein compare
MPMX19_05967 -0.6 -2.1 D-erythritol 1-phosphate dehydrogenase compare
MPMX19_03531 -0.6 -2.3 PCP degradation transcriptional activation protein compare
MPMX19_00680 -0.6 -1.3 Elongation factor P--(R)-beta-lysine ligase compare
MPMX19_06033 -0.6 -2.6 Phosphate transport system permease protein PstC compare
MPMX19_02714 -0.6 -1.6 hypothetical protein compare
MPMX19_00904 -0.6 -3.5 DNA repair protein RadA compare
MPMX19_04081 -0.6 -1.3 hypothetical protein compare
MPMX19_01015 -0.6 -2.1 Anthranilate phosphoribosyltransferase compare
MPMX19_00015 -0.6 -1.8 hypothetical protein compare
MPMX19_01884 -0.6 -1.6 Phosphoribosylformylglycinamidine synthase subunit PurQ compare
MPMX19_03613 -0.6 -1.7 N-acetylglucosamine-6-phosphate deacetylase compare
MPMX19_00156 -0.6 -2.3 hypothetical protein compare
MPMX19_04336 -0.6 -3.3 Cytochrome c2 compare
MPMX19_00795 -0.6 -2.6 Adaptive-response sensory-kinase SasA compare
MPMX19_01377 -0.6 -3.3 Outer membrane protein assembly factor BamA compare
MPMX19_05915 -0.6 -1.5 Flagellar M-ring protein compare
MPMX19_02495 -0.6 -3.1 Ribokinase compare
MPMX19_03612 -0.6 -1.7 hypothetical protein compare
MPMX19_04535 -0.6 -1.3 Maleate isomerase compare
MPMX19_01613 -0.6 -1.5 hypothetical protein compare
MPMX19_03069 -0.6 -1.4 hypothetical protein compare
MPMX19_03156 -0.6 -2.1 Ribonuclease VapC28 compare
MPMX19_01321 -0.5 -2.2 tRNA-Cys compare
MPMX19_02207 -0.5 -1.2 N-(5'-phosphoribosyl)anthranilate isomerase compare
MPMX19_03475 -0.5 -3.4 Putative acid--amine ligase YgiC compare
MPMX19_04809 -0.5 -2.6 hypothetical protein compare
MPMX19_00849 -0.5 -1.7 hypothetical protein compare
MPMX19_04127 -0.5 -3.1 hypothetical protein compare
MPMX19_00841 -0.5 -1.1 Holo-[acyl-carrier-protein] synthase compare
MPMX19_04326 -0.5 -1.8 Beta-hexosaminidase compare
MPMX19_00129 -0.5 -0.8 hypothetical protein compare
MPMX19_05534 -0.5 -1.1 DNA gyrase inhibitor YacG compare
MPMX19_06817 -0.5 -1.7 Glycine betaine/choline transport system permease protein OusW compare
MPMX19_01395 -0.5 -1.1 hypothetical protein compare
MPMX19_02134 -0.5 -2.6 Phage shock protein C compare
MPMX19_05013 -0.5 -2.2 Cytochrome b compare
MPMX19_03646 -0.5 -2.5 Histidinol-phosphate aminotransferase compare
MPMX19_04043 -0.5 -1.6 Aldehyde-alcohol dehydrogenase compare
MPMX19_03338 -0.5 -2.0 hypothetical protein compare
MPMX19_04913 -0.5 -1.0 hypothetical protein compare
MPMX19_00329 -0.5 -2.3 Putative membrane protein insertion efficiency factor compare
MPMX19_04668 -0.5 -0.8 HTH-type transcriptional regulator DmlR compare
MPMX19_05358 -0.5 -1.1 hypothetical protein compare
MPMX19_04104 -0.5 -3.1 hypothetical protein compare
MPMX19_06084 -0.5 -1.5 Transcriptional regulatory protein LnrK compare
MPMX19_06579 -0.5 -1.3 Carnitine monooxygenase oxygenase subunit compare
MPMX19_04864 -0.5 -1.3 hypothetical protein compare
MPMX19_05796 -0.5 -2.0 HTH-type transcriptional repressor BdcR compare
MPMX19_05177 -0.5 -1.6 Glyoxylate/hydroxypyruvate reductase A compare
MPMX19_05119 -0.5 -3.9 Glucose-6-phosphate 1-dehydrogenase compare
MPMX19_03247 -0.5 -2.3 putative RNA polymerase sigma factor FecI compare
MPMX19_05388 -0.5 -1.6 Leucine-responsive regulatory protein compare
MPMX19_06315 -0.5 -1.3 ISL3 family transposase ISAli18 compare
MPMX19_03064 -0.5 -1.9 Cytochrome c-type protein NapC compare
MPMX19_02348 -0.5 -1.3 hypothetical protein compare
MPMX19_02654 -0.5 -2.1 hypothetical protein compare
MPMX19_03915 -0.5 -1.6 hypothetical protein compare
MPMX19_00005 -0.5 -1.6 hypothetical protein compare
MPMX19_03182 -0.5 -2.1 hypothetical protein compare
MPMX19_00335 -0.5 -1.0 Magnesium transport protein CorA compare
MPMX19_04842 -0.5 -1.5 Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase compare
MPMX19_05824 -0.5 -1.7 hypothetical protein compare
MPMX19_02195 -0.5 -2.6 Recombination protein RecR compare
MPMX19_03314 -0.5 -2.1 2-keto-3-deoxy-L-fuconate dehydrogenase compare
MPMX19_06969 -0.5 -1.3 hypothetical protein compare
MPMX19_05554 -0.5 -1.6 hypothetical protein compare
MPMX19_03329 -0.5 -1.4 hypothetical protein compare
MPMX19_05109 -0.5 -1.7 hypothetical protein compare
MPMX19_00695 -0.5 -1.4 putative transcriptional regulatory protein compare
MPMX19_06464 -0.5 -1.5 Tryptophan synthase beta chain compare
MPMX19_03907 -0.5 -1.9 Short-chain-enoyl-CoA hydratase compare
MPMX19_02471 -0.5 -3.5 Ribosomal RNA small subunit methyltransferase I compare
MPMX19_06821 -0.5 -1.4 (E)-2-((N-methylformamido)methylene)succinate hydrolase compare
MPMX19_01894 -0.5 -2.5 hypothetical protein compare
MPMX19_03019 -0.5 -1.5 hypothetical protein compare
MPMX19_04347 -0.5 -2.2 ATP-dependent Clp protease proteolytic subunit compare
MPMX19_02931 -0.5 -2.0 Linearmycin resistance ATP-binding protein LnrL compare
MPMX19_02388 -0.5 -1.9 hypothetical protein compare
MPMX19_03169 -0.5 -1.1 Dihydroanticapsin 7-dehydrogenase compare
MPMX19_06934 -0.5 -1.3 Manganese transport system membrane protein MntB compare
MPMX19_03636 -0.5 -1.7 Octopine permease ATP-binding protein P compare
MPMX19_00606 -0.5 -2.2 3-isopropylmalate dehydratase small subunit 1 compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm; high oxygen experiments