Experiment set1S646 for Mucilaginibacter yixingensis YX-36 DSM 26809

Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days

Group: in planta
Media: + Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days
Culturing: Mucilaginibacter_YX36_ML5a, at 26 (C), (Solid)
By: Marta Torres on 4/20/23

Specific Phenotypes

For 1 genes in this experiment

For in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days in Mucilaginibacter yixingensis YX-36 DSM 26809

For in planta Plant=Brachypodium_distachyon; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A; Time=7_days across organisms

SEED Subsystems

Subsystem	#Specific
D-Galacturonate and D-Glucuronate Utilization	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

• Pentose and glucuronate interconversions

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
D-fructuronate degradation	4	4	1
superpathway of β-D-glucuronosides degradation	7	7	1
superpathway of hexuronide and hexuronate degradation	10	10	1
superpathway of microbial D-galacturonate and D-glucuronate degradation	31	13	1