Experiment set1S64 for Azospirillum sp. SherDot2

Compare to:

NL-CCM; high oxygen

200 most important genes:

  gene name fitness t score description  
MPMX19_06353 -2.9 -2.0 hypothetical protein compare
MPMX19_02267 -2.1 -1.5 hypothetical protein compare
MPMX19_04948 -2.0 -2.9 HTH-type transcriptional regulator GltR compare
MPMX19_02320 -1.9 -2.5 HTH-type transcriptional regulator GltR compare
MPMX19_02618 -1.8 -2.8 Transcriptional regulatory protein BaeR compare
MPMX19_01729 -1.6 -2.1 Ethylmalonyl-CoA/methylmalonyl-CoA epimerase compare
MPMX19_01053 -1.6 -3.8 Dihydroorotase compare
MPMX19_01054 -1.5 -5.4 Aspartate carbamoyltransferase compare
MPMX19_02303 -1.5 -3.0 hypothetical protein compare
MPMX19_00126 -1.5 -3.3 hypothetical protein compare
MPMX19_02664 -1.5 -1.7 Arabinose 5-phosphate isomerase KdsD compare
MPMX19_03906 -1.5 -10.9 Pca regulon regulatory protein compare
MPMX19_03787 -1.5 -2.5 hypothetical protein compare
MPMX19_06880 -1.4 -1.7 Validamycin A dioxygenase compare
MPMX19_05100 -1.4 -3.1 hypothetical protein compare
MPMX19_00128 -1.4 -8.9 hypothetical protein compare
MPMX19_02779 -1.3 -2.6 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_00478 -1.3 -1.9 putative protein RP812 compare
MPMX19_00304 -1.3 -3.0 Phosphatidylcholine synthase compare
MPMX19_00129 -1.3 -1.3 hypothetical protein compare
MPMX19_01630 -1.3 -3.7 Phosphoribosylamine--glycine ligase compare
MPMX19_00933 -1.2 -3.3 hypothetical protein compare
MPMX19_02981 -1.2 -4.8 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_03642 -1.2 -1.7 hypothetical protein compare
MPMX19_00020 -1.2 -1.5 hypothetical protein compare
MPMX19_05472 -1.1 -2.2 hypothetical protein compare
MPMX19_06426 -1.1 -3.5 hypothetical protein compare
MPMX19_06090 -1.1 -1.7 Pyruvate dehydrogenase complex repressor compare
MPMX19_01955 -1.1 -1.7 Putative anti-sigma factor antagonist compare
MPMX19_00766 -1.0 -2.3 hypothetical protein compare
MPMX19_01822 -1.0 -4.6 2-isopropylmalate synthase compare
MPMX19_01748 -1.0 -2.3 hypothetical protein compare
MPMX19_05313 -1.0 -2.2 4,4'-diapolycopene aldehyde oxidase compare
MPMX19_06723 -1.0 -3.1 hypothetical protein compare
MPMX19_03453 -1.0 -3.0 Putative aliphatic sulfonates-binding protein compare
MPMX19_04149 -1.0 -2.2 hypothetical protein compare
MPMX19_03822 -1.0 -2.0 Sulfur carrier protein FdhD compare
MPMX19_01059 -1.0 -1.4 hypothetical protein compare
MPMX19_05044 -0.9 -1.7 hypothetical protein compare
MPMX19_04079 -0.9 -1.7 hypothetical protein compare
MPMX19_00846 -0.9 -1.7 hypothetical protein compare
MPMX19_01703 -0.9 -1.6 hypothetical protein compare
MPMX19_03450 -0.9 -1.5 hypothetical protein compare
MPMX19_02905 -0.9 -2.4 hypothetical protein compare
MPMX19_03612 -0.9 -2.5 hypothetical protein compare
MPMX19_00530 -0.9 -2.5 Orotate phosphoribosyltransferase compare
MPMX19_02674 -0.9 -1.6 NADH:quinone reductase compare
MPMX19_00705 -0.9 -2.4 Cell division coordinator CpoB compare
MPMX19_05658 -0.9 -2.2 hypothetical protein compare
MPMX19_02607 -0.9 -2.8 hypothetical protein compare
MPMX19_05445 -0.9 -2.4 tRNA-Glu compare
MPMX19_00066 -0.9 -0.9 hypothetical protein compare
MPMX19_03063 -0.9 -2.4 hypothetical protein compare
MPMX19_00904 -0.9 -5.0 DNA repair protein RadA compare
MPMX19_06327 -0.9 -1.3 hypothetical protein compare
MPMX19_00503 -0.8 -2.9 ATP-dependent Clp protease ATP-binding subunit ClpA compare
MPMX19_03213 -0.8 -2.5 hypothetical protein compare
MPMX19_03389 -0.8 -2.8 Carbon monoxide dehydrogenase small chain compare
MPMX19_01560 -0.8 -2.3 3'-5' exonuclease DinG compare
MPMX19_02095 -0.8 -2.4 Ferric uptake regulation protein compare
MPMX19_05605 -0.8 -2.4 hypothetical protein compare
MPMX19_04681 -0.8 -1.4 5-hydroxyisourate hydrolase compare
MPMX19_01304 -0.8 -5.5 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX19_02198 -0.8 -2.6 hypothetical protein compare
MPMX19_01297 -0.8 -1.5 hypothetical protein compare
MPMX19_03635 -0.8 -1.0 DNA-binding transcriptional activator DecR compare
MPMX19_00714 -0.8 -3.9 Ferrous-iron efflux pump FieF compare
MPMX19_01714 -0.8 -1.3 tRNA-modifying protein YgfZ compare
MPMX19_03496 -0.8 -2.5 Protein FdhE compare
MPMX19_02553 -0.8 -3.5 Protein-export protein SecB compare
MPMX19_02516 -0.8 -3.0 hypothetical protein compare
MPMX19_01321 -0.8 -2.5 tRNA-Cys compare
MPMX19_05271 -0.8 -1.4 hypothetical protein compare
MPMX19_03724 -0.8 -1.4 hypothetical protein compare
MPMX19_00149 -0.8 -2.5 hypothetical protein compare
MPMX19_01883 -0.8 -3.7 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_00821 -0.8 -2.5 Protein SlyX compare
MPMX19_04171 -0.8 -1.4 16S ribosomal RNA compare
MPMX19_05070 -0.8 -2.7 hypothetical protein compare
MPMX19_03335 -0.8 -1.9 hypothetical protein compare
MPMX19_01423 -0.8 -2.0 hypothetical protein compare
MPMX19_01777 -0.8 -2.0 2-aminoadipate transaminase compare
MPMX19_02268 -0.7 -2.3 hypothetical protein compare
MPMX19_06179 -0.7 -1.4 putative SURF1-like protein compare
MPMX19_00574 -0.7 -2.6 hypothetical protein compare
MPMX19_00268 -0.7 -1.0 Transcriptional regulatory protein OmpR compare
MPMX19_00906 -0.7 -5.5 Amidophosphoribosyltransferase compare
MPMX19_05119 -0.7 -5.4 Glucose-6-phosphate 1-dehydrogenase compare
MPMX19_05505 -0.7 -1.6 Leucine-responsive regulatory protein compare
MPMX19_04898 -0.7 -2.1 Transcriptional regulatory protein LnrK compare
MPMX19_06001 -0.7 -3.0 hypothetical protein compare
MPMX19_03768 -0.7 -1.8 hypothetical protein compare
MPMX19_03196 -0.7 -1.8 hypothetical protein compare
MPMX19_00696 -0.7 -3.1 Crossover junction endodeoxyribonuclease RuvC compare
MPMX19_01860 -0.7 -2.6 hypothetical protein compare
MPMX19_04409 -0.7 -1.8 hypothetical protein compare
MPMX19_01565 -0.7 -1.6 hypothetical protein compare
MPMX19_03369 -0.7 -1.8 hypothetical protein compare
MPMX19_02875 -0.7 -1.5 hypothetical protein compare
MPMX19_02646 -0.7 -1.4 hypothetical protein compare
MPMX19_01168 -0.7 -2.7 Protein-L-isoaspartate O-methyltransferase compare
MPMX19_01243 -0.7 -1.4 hypothetical protein compare
MPMX19_01014 -0.7 -2.9 Indole-3-glycerol phosphate synthase compare
MPMX19_05215 -0.7 -2.2 hypothetical protein compare
MPMX19_01314 -0.7 -3.3 hypothetical protein compare
MPMX19_00633 -0.7 -3.6 Intermembrane phospholipid transport system lipoprotein MlaA compare
MPMX19_06546 -0.7 -1.7 hypothetical protein compare
MPMX19_04083 -0.7 -2.1 Cytochrome c-type protein SHP compare
MPMX19_04326 -0.7 -2.0 Beta-hexosaminidase compare
MPMX19_03790 -0.7 -1.6 hypothetical protein compare
MPMX19_04954 -0.7 -2.1 Putative hydro-lyase compare
MPMX19_02580 -0.7 -1.7 Acetyltransferase compare
MPMX19_02927 -0.7 -2.2 5,6,7,8-tetrahydromethanopterin hydro-lyase compare
MPMX19_05328 -0.7 -1.9 hypothetical protein compare
MPMX19_01610 -0.7 -0.9 ATP-dependent DNA helicase PcrA compare
MPMX19_00606 -0.7 -3.4 3-isopropylmalate dehydratase small subunit 1 compare
MPMX19_00680 -0.7 -1.5 Elongation factor P--(R)-beta-lysine ligase compare
MPMX19_01044 -0.7 -3.3 hypothetical protein compare
MPMX19_00839 -0.7 -0.9 hypothetical protein compare
MPMX19_00260 -0.7 -1.1 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_01085 -0.6 -2.9 hypothetical protein compare
MPMX19_03631 -0.6 -1.2 hypothetical protein compare
MPMX19_05747 -0.6 -1.3 Transcriptional regulatory protein DegU compare
MPMX19_00976 -0.6 -1.4 ATP-dependent RNA helicase RhlE compare
MPMX19_04701 -0.6 -1.6 Transcriptional regulatory protein FixJ compare
MPMX19_03806 -0.6 -2.0 hypothetical protein compare
MPMX19_03975 -0.6 -2.6 Putative thiosulfate sulfurtransferase compare
MPMX19_00794 -0.6 -2.1 Transcriptional activator protein CopR compare
MPMX19_01084 -0.6 -2.6 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX19_03367 -0.6 -1.9 Magnetosome membrane protein 22 compare
MPMX19_03340 -0.6 -1.7 hypothetical protein compare
MPMX19_06863 -0.6 -1.7 hypothetical protein compare
MPMX19_05016 -0.6 -1.2 Sensor histidine kinase RcsC compare
MPMX19_02737 -0.6 -2.7 Tryptophan synthase alpha chain compare
MPMX19_05818 -0.6 -1.4 hypothetical protein compare
MPMX19_03936 -0.6 -2.8 Acetyl-CoA acetyltransferase compare
MPMX19_03870 -0.6 -1.2 L-aspartate dehydrogenase compare
MPMX19_06768 -0.6 -1.4 hypothetical protein compare
MPMX19_03599 -0.6 -2.1 2-amino-5-chloromuconic acid deaminase compare
MPMX19_03423 -0.6 -2.3 hypothetical protein compare
MPMX19_04955 -0.6 -3.9 hypothetical protein compare
MPMX19_06988 -0.6 -2.2 hypothetical protein compare
MPMX19_05601 -0.6 -2.3 putative ABC transporter ATP-binding protein YejF compare
MPMX19_00148 -0.6 -0.9 hypothetical protein compare
MPMX19_03295 -0.6 -1.2 HTH-type transcriptional regulator McbR compare
MPMX19_01247 -0.6 -1.2 Transcriptional regulatory protein DegU compare
MPMX19_05872 -0.6 -1.3 Redox-sensitive transcriptional activator SoxR compare
MPMX19_03473 -0.6 -2.6 hypothetical protein compare
MPMX19_06522 -0.6 -2.4 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_02378 -0.6 -1.6 hypothetical protein compare
MPMX19_05464 -0.6 -3.6 hypothetical protein compare
MPMX19_02657 -0.6 -5.3 Glutamate synthase [NADPH] large chain compare
MPMX19_05095 -0.6 -1.8 Toxin YoeB compare
MPMX19_02495 -0.6 -3.2 Ribokinase compare
MPMX19_05355 -0.6 -1.2 Transcriptional regulator SlyA compare
MPMX19_03282 -0.6 -2.4 HTH-type transcriptional regulator McbR compare
MPMX19_06736 -0.6 -2.1 hypothetical protein compare
MPMX19_05440 -0.6 -2.2 hypothetical protein compare
MPMX19_00570 -0.6 -3.2 L-Ala-D/L-Glu epimerase compare
MPMX19_01508 -0.6 -1.5 hypothetical protein compare
MPMX19_02180 -0.6 -2.0 hypothetical protein compare
MPMX19_05433 -0.6 -1.7 hypothetical protein compare
MPMX19_04959 -0.6 -2.8 5-oxoprolinase subunit A compare
MPMX19_02993 -0.6 -2.5 D-xylose dehydrogenase compare
MPMX19_00262 -0.6 -1.0 Thiazole synthase compare
MPMX19_05459 -0.6 -0.7 hypothetical protein compare
MPMX19_00037 -0.6 -3.5 hypothetical protein compare
MPMX19_00887 -0.6 -1.2 hypothetical protein compare
MPMX19_01162 -0.6 -2.6 hypothetical protein compare
MPMX19_05808 -0.6 -2.8 NAD-dependent dihydropyrimidine dehydrogenase subunit PreA compare
MPMX19_01208 -0.6 -3.6 hypothetical protein compare
MPMX19_04610 -0.6 -1.1 putative enoyl-CoA hydratase 1 compare
MPMX19_04971 -0.6 -3.0 Sensor histidine kinase RcsC compare
MPMX19_01499 -0.6 -2.1 hypothetical protein compare
MPMX19_00608 -0.6 -0.7 hypothetical protein compare
MPMX19_03788 -0.6 -2.2 hypothetical protein compare
MPMX19_02266 -0.6 -2.2 hypothetical protein compare
MPMX19_06534 -0.6 -1.9 Putative amino-acid ABC transporter-binding protein YhdW compare
MPMX19_04942 -0.6 -3.4 hypothetical protein compare
MPMX19_03636 -0.6 -2.0 Octopine permease ATP-binding protein P compare
MPMX19_04282 -0.6 -2.2 hypothetical protein compare
MPMX19_01654 -0.5 -3.7 HTH-type transcriptional regulator IscR compare
MPMX19_06351 -0.5 -0.7 Arsenate reductase compare
MPMX19_03182 -0.5 -1.5 hypothetical protein compare
MPMX19_04951 -0.5 -3.6 hypothetical protein compare
MPMX19_03342 -0.5 -1.4 hypothetical protein compare
MPMX19_04469 -0.5 -1.2 hypothetical protein compare
MPMX19_05021 -0.5 -2.6 Methylmalonyl-CoA mutase compare
MPMX19_05727 -0.5 -2.9 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX19_04995 -0.5 -2.0 D-alanine aminotransferase compare
MPMX19_00122 -0.5 -1.5 hypothetical protein compare
MPMX19_03798 -0.5 -1.4 hypothetical protein compare
MPMX19_00190 -0.5 -1.6 hypothetical protein compare
MPMX19_05048 -0.5 -2.9 hypothetical protein compare
MPMX19_05931 -0.5 -2.7 Lysine 6-dehydrogenase compare
MPMX19_03646 -0.5 -2.4 Histidinol-phosphate aminotransferase compare
MPMX19_05272 -0.5 -1.3 hypothetical protein compare
MPMX19_06821 -0.5 -1.7 (E)-2-((N-methylformamido)methylene)succinate hydrolase compare
MPMX19_05111 -0.5 -1.2 PqqA binding protein compare
MPMX19_03959 -0.5 -1.1 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm; high oxygen experiments