Experiment set1S64 for Azospirillum sp. SherDot2

Compare to:

NL-CCM; high oxygen

200 most detrimental genes:

  gene name fitness t score description  
MPMX19_05581 +1.3 3.7 hypothetical protein compare
MPMX19_05690 +1.1 7.8 Protein phosphotransferase ChpT compare
MPMX19_05623 +1.1 6.1 Photosynthetic apparatus regulatory protein RegA compare
MPMX19_01480 +1.0 5.5 hypothetical protein compare
MPMX19_01349 +1.0 7.6 hypothetical protein compare
MPMX19_05622 +1.0 7.5 Sensor histidine kinase RegB compare
MPMX19_06197 +1.0 2.2 hypothetical protein compare
MPMX19_00212 +1.0 8.2 Nitrogen fixation regulation protein FixK compare
MPMX19_05193 +1.0 2.2 Taurine-binding periplasmic protein compare
MPMX19_04258 +0.9 5.0 hypothetical protein compare
MPMX19_03846 +0.9 3.3 hypothetical protein compare
MPMX19_04638 +0.9 2.8 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_04225 +0.9 4.6 hypothetical protein compare
MPMX19_01495 +0.9 2.3 hypothetical protein compare
MPMX19_01401 +0.9 2.6 Ubiquinone biosynthesis accessory factor UbiK compare
MPMX19_01479 +0.9 4.7 hypothetical protein compare
MPMX19_00864 +0.9 4.0 Flagellar hook-basal body complex protein FliE compare
MPMX19_04000 +0.9 3.9 Flagellar motor switch protein FliG compare
MPMX19_02460 +0.8 7.8 Motility protein A compare
MPMX19_01482 +0.8 6.7 hypothetical protein compare
MPMX19_04087 +0.8 3.1 Flagellum site-determining protein YlxH compare
MPMX19_04198 +0.8 6.7 hypothetical protein compare
MPMX19_04088 +0.8 3.7 Signal recognition particle 54 kDa protein compare
MPMX19_04199 +0.7 5.7 Pseudaminic acid synthase compare
MPMX19_04094 +0.7 5.4 Flagellar M-ring protein compare
MPMX19_06989 +0.7 2.0 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_01484 +0.7 4.6 Flagellar basal-body rod protein FlgG compare
MPMX19_01978 +0.7 1.9 hypothetical protein compare
MPMX19_06577 +0.7 5.5 hypothetical protein compare
MPMX19_06544 +0.7 6.0 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) compare
MPMX19_05686 +0.7 2.1 Chemotaxis protein CheY compare
MPMX19_06545 +0.7 6.1 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase compare
MPMX19_05685 +0.7 5.3 Protein-glutamate methylesterase/protein-glutamine glutaminase 2 compare
MPMX19_05906 +0.7 1.5 hypothetical protein compare
MPMX19_05470 +0.7 2.9 hypothetical protein compare
MPMX19_00472 +0.7 2.0 Protein HesB, heterocyst compare
MPMX19_01493 +0.7 1.7 Flagellar assembly protein FliX compare
MPMX19_03439 +0.7 1.2 hypothetical protein compare
MPMX19_05652 +0.7 1.8 hypothetical protein compare
MPMX19_00085 +0.7 2.9 hypothetical protein compare
MPMX19_05188 +0.7 3.1 Aliphatic sulfonates import ATP-binding protein SsuB compare
MPMX19_00208 +0.6 1.7 hypothetical protein compare
MPMX19_04392 +0.6 2.1 Bifunctional methionine biosynthesis protein MetXA/MetW compare
MPMX19_00725 +0.6 3.7 Transcriptional regulatory protein ros compare
MPMX19_05762 +0.6 2.3 hypothetical protein compare
MPMX19_06581 +0.6 4.9 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 2 compare
MPMX19_04204 +0.6 4.6 D-alanine--D-alanyl carrier protein ligase compare
MPMX19_06874 +0.6 1.9 hypothetical protein compare
MPMX19_06373 +0.6 1.5 Lipoprotein signal peptidase compare
MPMX19_06193 +0.6 1.3 Flagellar hook-basal body complex protein FliE compare
MPMX19_04207 +0.6 2.1 hypothetical protein compare
MPMX19_00708 +0.6 4.9 hypothetical protein compare
MPMX19_00863 +0.6 4.3 Flagellar basal-body rod protein FlgC compare
MPMX19_06510 +0.6 2.1 Aliphatic sulfonates import ATP-binding protein SsuB compare
MPMX19_00244 +0.6 2.4 hypothetical protein compare
MPMX19_05273 +0.6 2.0 hypothetical protein compare
MPMX19_02532 +0.6 1.8 Cytochrome c-type biogenesis protein CcmE compare
MPMX19_05104 +0.6 1.0 hypothetical protein compare
MPMX19_00318 +0.6 3.5 hypothetical protein compare
MPMX19_02499 +0.6 2.1 hypothetical protein compare
MPMX19_00868 +0.6 5.2 Sensor kinase CckA compare
MPMX19_03976 +0.6 3.1 hypothetical protein compare
MPMX19_04211 +0.6 2.4 hypothetical protein compare
MPMX19_01766 +0.6 3.3 Phosphate-specific transport system accessory protein PhoU compare
MPMX19_06582 +0.6 4.7 hypothetical protein compare
MPMX19_04093 +0.6 2.5 hypothetical protein compare
MPMX19_02970 +0.6 2.4 Sialic acid-binding periplasmic protein SiaP compare
MPMX19_01494 +0.5 3.8 Flagellar P-ring protein compare
MPMX19_02937 +0.5 1.0 hypothetical protein compare
MPMX19_00311 +0.5 4.9 hypothetical protein compare
MPMX19_02608 +0.5 2.4 hypothetical protein compare
MPMX19_01486 +0.5 4.1 Flagellar L-ring protein compare
MPMX19_00515 +0.5 3.9 hypothetical protein compare
MPMX19_00858 +0.5 2.6 Flagellar biosynthetic protein FliP compare
MPMX19_04223 +0.5 4.6 hypothetical protein compare
MPMX19_05448 +0.5 2.1 DNA-invertase hin compare
MPMX19_00866 +0.5 3.3 Flagellar biosynthetic protein FliR compare
MPMX19_02819 +0.5 2.7 hypothetical protein compare
MPMX19_02746 +0.5 3.7 Peptidyl-lysine N-acetyltransferase Pat compare
MPMX19_00294 +0.5 2.1 Adaptive-response sensory-kinase SasA compare
MPMX19_01483 +0.5 3.9 Flagellar basal-body rod protein FlgG compare
MPMX19_05195 +0.5 1.8 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_04449 +0.5 1.2 Inosine-5'-monophosphate dehydrogenase compare
MPMX19_03197 +0.5 1.8 hypothetical protein compare
MPMX19_04212 +0.5 4.2 Photosystem I assembly protein Ycf3 compare
MPMX19_05333 +0.5 1.5 Thymidine phosphorylase compare
MPMX19_04633 +0.5 1.5 hypothetical protein compare
MPMX19_06917 +0.5 2.0 HTH-type transcriptional regulator PgrR compare
MPMX19_03462 +0.5 2.1 Acetate CoA-transferase subunit alpha compare
MPMX19_06580 +0.5 2.4 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_03491 +0.5 1.5 putative FAD-linked oxidoreductase compare
MPMX19_02749 +0.5 1.5 hypothetical protein compare
MPMX19_05430 +0.5 1.7 HTH-type transcriptional regulator DmlR compare
MPMX19_04968 +0.5 1.3 hypothetical protein compare
MPMX19_01614 +0.5 1.5 hypothetical protein compare
MPMX19_04200 +0.5 3.3 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase compare
MPMX19_04209 +0.5 4.2 Lipopolysaccharide assembly protein B compare
MPMX19_00577 +0.5 2.4 Ribosomal RNA small subunit methyltransferase E compare
MPMX19_04205 +0.5 2.2 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_06227 +0.5 2.3 L-arabinose 1-dehydrogenase (NAD(P)(+)) compare
MPMX19_02039 +0.5 2.7 hypothetical protein compare
MPMX19_06610 +0.5 0.8 hypothetical protein compare
MPMX19_01485 +0.5 3.6 hypothetical protein compare
MPMX19_00854 +0.5 4.3 hypothetical protein compare
MPMX19_04090 +0.5 3.6 Anaerobic nitric oxide reductase transcription regulator NorR compare
MPMX19_06156 +0.5 1.4 hypothetical protein compare
MPMX19_05176 +0.5 1.4 4-hydroxy-3-prenylphenylpyruvate oxygenase/4-hydroxy-3-prenylbenzoate synthase compare
MPMX19_04670 +0.5 1.8 hypothetical protein compare
MPMX19_01481 +0.5 3.8 Flagellar motor switch protein FliM compare
MPMX19_03212 +0.5 1.8 hypothetical protein compare
MPMX19_06268 +0.5 2.8 hypothetical protein compare
MPMX19_06886 +0.5 2.0 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_00166 +0.5 1.2 hypothetical protein compare
MPMX19_02565 +0.5 4.3 hypothetical protein compare
MPMX19_04224 +0.5 4.3 hypothetical protein compare
MPMX19_02806 +0.5 1.2 HTH-type transcriptional regulator DmlR compare
MPMX19_06221 +0.5 2.2 L-2-keto-3-deoxyarabonate dehydratase compare
MPMX19_03297 +0.5 1.7 hypothetical protein compare
MPMX19_06355 +0.5 2.1 hypothetical protein compare
MPMX19_06255 +0.5 1.8 hypothetical protein compare
MPMX19_06202 +0.5 0.8 hypothetical protein compare
MPMX19_05882 +0.5 1.9 hypothetical protein compare
MPMX19_03916 +0.5 1.4 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
MPMX19_01073 +0.4 1.6 5'-nucleotidase compare
MPMX19_05679 +0.4 3.3 Flagellum-specific ATP synthase compare
MPMX19_02149 +0.4 1.4 hypothetical protein compare
MPMX19_01645 +0.4 1.2 HTH-type transcriptional regulator GltC compare
MPMX19_02830 +0.4 2.3 N-carbamoyl-L-amino-acid hydrolase compare
MPMX19_03331 +0.4 1.8 hypothetical protein compare
MPMX19_02313 +0.4 3.0 Oxygen-independent coproporphyrinogen III oxidase compare
MPMX19_01125 +0.4 0.7 hypothetical protein compare
MPMX19_06795 +0.4 1.5 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase compare
MPMX19_06004 +0.4 1.1 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_02202 +0.4 1.0 hypothetical protein compare
MPMX19_03262 +0.4 1.4 putative HTH-type transcriptional repressor ExuR compare
MPMX19_06578 +0.4 3.2 hypothetical protein compare
MPMX19_05621 +0.4 2.6 ABC transporter ATP-binding protein NatA compare
MPMX19_06141 +0.4 1.7 Intermembrane phospholipid transport system permease protein MlaE compare
MPMX19_02524 +0.4 3.5 tRNA pseudouridine synthase B compare
MPMX19_06146 +0.4 1.0 hypothetical protein compare
MPMX19_04554 +0.4 1.8 Response regulator PleD compare
MPMX19_05575 +0.4 1.6 hypothetical protein compare
MPMX19_05726 +0.4 0.9 hypothetical protein compare
MPMX19_00957 +0.4 2.3 Phosphoribosyl-ATP pyrophosphatase compare
MPMX19_00438 +0.4 3.5 (R)-specific enoyl-CoA hydratase compare
MPMX19_00813 +0.4 1.0 HTH-type transcriptional regulator CysL compare
MPMX19_05065 +0.4 0.8 Farnesyl diphosphate synthase compare
MPMX19_01244 +0.4 1.4 hypothetical protein compare
MPMX19_01496 +0.4 3.1 hypothetical protein compare
MPMX19_02902 +0.4 1.5 hypothetical protein compare
MPMX19_05036 +0.4 2.2 hypothetical protein compare
MPMX19_04680 +0.4 1.5 Inner membrane ABC transporter permease protein YdcV compare
MPMX19_00211 +0.4 1.6 putative copper-importing P-type ATPase A compare
MPMX19_02248 +0.4 1.7 hypothetical protein compare
MPMX19_02778 +0.4 1.0 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_06853 +0.4 1.3 Glyoxylate/hydroxypyruvate reductase A compare
MPMX19_04438 +0.4 2.7 hypothetical protein compare
MPMX19_05295 +0.4 1.4 hypothetical protein compare
MPMX19_04986 +0.4 1.7 hypothetical protein compare
MPMX19_05714 +0.4 2.8 hypothetical protein compare
MPMX19_01119 +0.4 1.4 hypothetical protein compare
MPMX19_02382 +0.4 1.7 hypothetical protein compare
MPMX19_06404 +0.4 1.5 hypothetical protein compare
MPMX19_06916 +0.4 1.2 Crotonyl-CoA hydratase compare
MPMX19_00907 +0.4 2.3 putative oxidoreductase YciK compare
MPMX19_04222 +0.4 3.5 hypothetical protein compare
MPMX19_05745 +0.4 3.0 Sensor histidine kinase RcsC compare
MPMX19_06187 +0.4 1.8 hypothetical protein compare
MPMX19_04494 +0.4 1.9 p-hydroxybenzoic acid efflux pump subunit AaeA compare
MPMX19_06585 +0.4 3.7 hypothetical protein compare
MPMX19_03859 +0.4 1.3 hypothetical protein compare
MPMX19_04952 +0.4 1.2 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_04766 +0.4 1.9 Glycine cleavage system transcriptional activator compare
MPMX19_06281 +0.4 1.6 hypothetical protein compare
MPMX19_03823 +0.4 1.4 hypothetical protein compare
MPMX19_04120 +0.4 1.3 hypothetical protein compare
MPMX19_03710 +0.4 1.3 Glycine cleavage system transcriptional activator compare
MPMX19_04276 +0.4 0.9 hypothetical protein compare
MPMX19_02466 +0.4 1.0 Octopine permease ATP-binding protein P compare
MPMX19_06696 +0.4 1.2 hypothetical protein compare
MPMX19_06944 +0.4 2.3 Fatty acid oxidation complex subunit alpha compare
MPMX19_04699 +0.4 1.6 hypothetical protein compare
MPMX19_06042 +0.4 2.0 hypothetical protein compare
MPMX19_04082 +0.4 2.2 hypothetical protein compare
MPMX19_00206 +0.4 2.8 Cytochrome c oxidase subunit 1, bacteroid compare
MPMX19_01075 +0.4 0.6 Molybdopterin synthase sulfur carrier subunit compare
MPMX19_04206 +0.4 2.2 3-oxoacyl-[acyl-carrier-protein] synthase 3 compare
MPMX19_02127 +0.4 2.6 hypothetical protein compare
MPMX19_00370 +0.4 1.4 hypothetical protein compare
MPMX19_02402 +0.4 0.7 hypothetical protein compare
MPMX19_00475 +0.4 1.0 hypothetical protein compare
MPMX19_02791 +0.4 2.4 Haloalkane dehalogenase compare
MPMX19_01781 +0.4 2.9 Enoyl-[acyl-carrier-protein] reductase [NADH] FabI compare
MPMX19_04161 +0.4 1.1 hypothetical protein compare
MPMX19_04911 +0.4 1.6 hypothetical protein compare
MPMX19_03613 +0.4 1.3 N-acetylglucosamine-6-phosphate deacetylase compare
MPMX19_04257 +0.4 2.4 D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase compare
MPMX19_00861 +0.4 2.8 hypothetical protein compare
MPMX19_05201 +0.4 1.7 Hydroxycarboxylate dehydrogenase B compare
MPMX19_04913 +0.4 0.6 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm; high oxygen experiments