Experiment set1S635 for Mucilaginibacter yixingensis YX-36 DSM 26809

Compare to:

Trimethoprim stress 0.05 mg/ml

200 most important genes:

  gene name fitness t score description  
ABZR88_RS04735 -2.2 -1.1 sensor histidine kinase KdpD compare
ABZR88_RS19330 -2.0 -1.5 hypothetical protein compare
ABZR88_RS02605 -1.9 -1.3 hypothetical protein compare
ABZR88_RS13935 -1.9 -3.9 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
ABZR88_RS17640 -1.8 -6.7 glycosyltransferase family 4 protein compare
ABZR88_RS06605 -1.8 -1.8 hypothetical protein compare
ABZR88_RS17645 -1.7 -6.8 hypothetical protein compare
ABZR88_RS17665 -1.6 -7.7 NAD-dependent epimerase/dehydratase family protein compare
ABZR88_RS17670 -1.6 -4.7 glycosyltransferase family 4 protein compare
ABZR88_RS17615 -1.6 -7.6 glycosyltransferase family 2 protein compare
ABZR88_RS17705 -1.6 -7.3 tyrosine-protein kinase compare
ABZR88_RS17635 -1.5 -7.7 hypothetical protein compare
ABZR88_RS17450 -1.5 -3.2 glycosyltransferase family 1 protein compare
ABZR88_RS19085 -1.4 -2.6 phage holin family protein compare
ABZR88_RS17700 -1.4 -6.5 ABC transporter permease compare
ABZR88_RS17610 -1.4 -5.8 WcaI family glycosyltransferase compare
ABZR88_RS17660 -1.3 -6.8 glycosyltransferase compare
ABZR88_RS20620 -1.3 -4.4 Ig-like domain-containing protein compare
ABZR88_RS17650 -1.3 -5.9 glycosyltransferase compare
ABZR88_RS20910 -1.3 -4.4 tyrosine-protein phosphatase compare
ABZR88_RS17335 -1.3 -1.6 glycosyltransferase family 2 protein compare
ABZR88_RS12720 -1.3 -1.7 D-glycero-beta-D-manno-heptose-7-phosphate kinase compare
ABZR88_RS19845 -1.2 -0.9 hypothetical protein compare
ABZR88_RS04465 -1.2 -1.7 hypothetical protein compare
ABZR88_RS11945 -1.2 -2.6 biopolymer transporter ExbD compare
ABZR88_RS11930 -1.2 -2.5 hypothetical protein compare
ABZR88_RS17630 -1.2 -4.5 glycosyltransferase family 9 protein compare
ABZR88_RS17695 -1.2 -6.6 polysaccharide ABC transporter ATP-binding protein compare
ABZR88_RS06910 -1.2 -1.2 glutamate synthase subunit beta compare
ABZR88_RS12840 -1.1 -4.1 CDP-glucose 4,6-dehydratase compare
ABZR88_RS04925 -1.1 -1.1 ABC transporter permease compare
ABZR88_RS22250 -1.1 -0.9 16S rRNA (cytidine(1402)-2'-O)-methyltransferase compare
ABZR88_RS21765 -1.0 -1.0 phosphonate C-P lyase system protein PhnG compare
ABZR88_RS01340 -1.0 -2.0 putative porin compare
ABZR88_RS16595 -1.0 -1.1 anthranilate synthase component I family protein compare
ABZR88_RS21295 -0.9 -1.3 hypothetical protein compare
ABZR88_RS17710 -0.9 -1.8 polysaccharide biosynthesis/export family protein compare
ABZR88_RS17390 -0.9 -4.9 BamA/TamA family outer membrane protein compare
ABZR88_RS12830 -0.9 -5.8 NAD-dependent epimerase/dehydratase family protein compare
ABZR88_RS20860 -0.9 -1.4 pirin family protein compare
ABZR88_RS17680 -0.9 -4.0 glycosyl transferase compare
ABZR88_RS17625 -0.9 -2.3 hypothetical protein compare
ABZR88_RS12825 -0.8 -2.1 transketolase compare
ABZR88_RS17345 -0.8 -1.4 glycosyltransferase family 1 protein compare
ABZR88_RS12820 -0.8 -4.7 transketolase family protein compare
ABZR88_RS11925 -0.8 -2.5 tetratricopeptide repeat protein compare
ABZR88_RS22010 -0.8 -2.0 RNA polymerase sigma factor compare
ABZR88_RS04220 -0.8 -1.2 DUF4136 domain-containing protein compare
ABZR88_RS17690 -0.8 -5.5 glycosyltransferase family A protein compare
ABZR88_RS17385 -0.8 -6.2 translocation/assembly module TamB domain-containing protein compare
ABZR88_RS19040 -0.8 -0.8 response regulator compare
ABZR88_RS12665 -0.8 -0.7 4a-hydroxytetrahydrobiopterin dehydratase compare
ABZR88_RS16640 -0.8 -2.7 ATP-binding protein compare
ABZR88_RS18795 -0.8 -0.9 phosphosulfolactate synthase compare
ABZR88_RS01390 -0.8 -0.6 hypothetical protein compare
ABZR88_RS10600 -0.8 -2.0 glycerophosphoryl diester phosphodiesterase membrane domain-containing protein compare
ABZR88_RS11755 -0.7 -3.5 aspartate kinase compare
ABZR88_RS19020 -0.7 -0.6 apolipoprotein N-acyltransferase compare
ABZR88_RS03015 -0.7 -3.6 DUF5686 and carboxypeptidase-like regulatory domain-containing protein compare
ABZR88_RS05895 -0.7 -2.0 helix-turn-helix domain-containing protein compare
ABZR88_RS19140 -0.7 -1.2 lmo0937 family membrane protein compare
ABZR88_RS05045 -0.7 -0.6 monofunctional biosynthetic peptidoglycan transglycosylase compare
ABZR88_RS16090 -0.7 -1.4 hypothetical protein compare
ABZR88_RS20950 -0.7 -1.4 cobalamin B12-binding domain-containing protein compare
ABZR88_RS17675 -0.7 -3.4 DUF5672 family protein compare
ABZR88_RS11950 -0.7 -1.8 energy transducer TonB compare
ABZR88_RS07985 -0.7 -1.6 polysaccharide deacetylase family protein compare
ABZR88_RS13940 -0.7 -2.4 glycosyltransferase family 9 protein compare
ABZR88_RS17145 -0.7 -1.0 NADH-quinone oxidoreductase subunit NuoF compare
ABZR88_RS18665 -0.7 -2.2 lytic transglycosylase domain-containing protein compare
ABZR88_RS00055 -0.7 -1.1 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
ABZR88_RS04700 -0.7 -0.7 hypothetical protein compare
ABZR88_RS16550 -0.7 -4.6 RNA polymerase sigma factor compare
ABZR88_RS22340 -0.7 -0.9 tRNA dihydrouridine synthase DusB compare
ABZR88_RS00405 -0.6 -0.8 type 1 glutamine amidotransferase compare
ABZR88_RS03425 -0.6 -1.3 hypothetical protein compare
ABZR88_RS21270 -0.6 -0.6 Crp/Fnr family transcriptional regulator compare
ABZR88_RS02790 -0.6 -4.4 PD40 domain-containing protein compare
ABZR88_RS20715 -0.6 -2.8 family 16 glycosylhydrolase compare
ABZR88_RS18230 -0.6 -0.9 GNAT family N-acetyltransferase compare
ABZR88_RS09960 -0.6 -1.5 cytochrome c compare
ABZR88_RS03315 -0.6 -0.7 hypothetical protein compare
ABZR88_RS15790 -0.6 -1.1 biopolymer transporter ExbD compare
ABZR88_RS03430 -0.6 -1.8 ankyrin repeat domain-containing protein compare
ABZR88_RS04640 -0.6 -2.2 aldose 1-epimerase family protein compare
ABZR88_RS10120 -0.6 -1.6 DUF1761 domain-containing protein compare
ABZR88_RS17240 -0.6 -1.9 ATP-dependent DNA helicase RecG compare
ABZR88_RS00350 -0.6 -0.8 hypothetical protein compare
ABZR88_RS09500 -0.6 -2.6 hypothetical protein compare
ABZR88_RS18345 -0.6 -1.0 hypothetical protein compare
ABZR88_RS14970 -0.6 -1.8 hypothetical protein compare
ABZR88_RS06840 -0.5 -1.3 WD40 repeat domain-containing protein compare
ABZR88_RS21405 -0.5 -1.4 flavodoxin family protein compare
ABZR88_RS14205 -0.5 -0.9 response regulator compare
ABZR88_RS18725 -0.5 -0.7 HAMP domain-containing sensor histidine kinase compare
ABZR88_RS14400 -0.5 -2.2 ferritin-like domain-containing protein compare
ABZR88_RS15370 -0.5 -1.6 transcriptional regulator compare
ABZR88_RS17795 -0.5 -1.1 ribosome-associated translation inhibitor RaiA compare
ABZR88_RS06305 -0.5 -1.1 hypothetical protein compare
ABZR88_RS21415 -0.5 -1.6 DUF1543 domain-containing protein compare
ABZR88_RS15865 -0.5 -1.7 MerR family transcriptional regulator compare
ABZR88_RS11420 -0.5 -2.2 NAD(P)-dependent alcohol dehydrogenase compare
ABZR88_RS19220 -0.5 -1.2 sigma-70 family RNA polymerase sigma factor compare
ABZR88_RS08150 -0.5 -0.6 helix-turn-helix domain-containing protein compare
ABZR88_RS06720 -0.5 -1.5 uridine kinase compare
ABZR88_RS14995 -0.5 -2.8 cell wall metabolism sensor histidine kinase WalK compare
ABZR88_RS02400 -0.5 -1.6 hypothetical protein compare
ABZR88_RS07990 -0.5 -1.3 Holliday junction branch migration DNA helicase RuvB compare
ABZR88_RS00365 -0.5 -2.8 endonuclease/exonuclease/phosphatase family protein compare
ABZR88_RS09335 -0.5 -1.3 low specificity L-threonine aldolase compare
ABZR88_RS21700 -0.5 -0.9 Lrp/AsnC ligand binding domain-containing protein compare
ABZR88_RS14150 -0.5 -2.0 magnesium transporter compare
ABZR88_RS03690 -0.5 -0.9 SCO family protein compare
ABZR88_RS09270 -0.5 -1.7 STAS domain-containing protein compare
ABZR88_RS20825 -0.5 -0.9 3-oxoacyl-ACP synthase compare
ABZR88_RS21095 -0.5 -1.6 MarR family winged helix-turn-helix transcriptional regulator compare
ABZR88_RS18280 -0.5 -0.7 twin-arginine translocase TatA/TatE family subunit compare
ABZR88_RS02015 -0.5 -1.6 tRNA pseudouridine(55) synthase TruB compare
ABZR88_RS16310 -0.5 -1.1 MmcQ/YjbR family DNA-binding protein compare
ABZR88_RS04085 -0.5 -1.9 Gfo/Idh/MocA family protein compare
ABZR88_RS08940 -0.5 -1.2 sugar transferase compare
ABZR88_RS06310 -0.5 -0.9 cold-shock protein compare
ABZR88_RS10345 -0.4 -1.5 hypothetical protein compare
ABZR88_RS21480 -0.4 -1.7 ABC transporter permease compare
ABZR88_RS19175 -0.4 -2.2 FAD:protein FMN transferase compare
ABZR88_RS13830 -0.4 -1.4 ABC transporter ATP-binding protein compare
ABZR88_RS19380 -0.4 -0.7 VOC family protein compare
ABZR88_RS19795 -0.4 -1.3 potassium-transporting ATPase subunit F compare
ABZR88_RS02510 -0.4 -1.9 toxin-antitoxin system YwqK family antitoxin compare
ABZR88_RS13260 -0.4 -1.4 SelT/SelW/SelH family protein compare
ABZR88_RS11760 -0.4 -1.0 phosphatidylinositol-specific phospholipase C/glycerophosphodiester phosphodiesterase family protein compare
ABZR88_RS15555 -0.4 -1.6 TMEM175 family protein compare
ABZR88_RS11940 -0.4 -0.7 MotA/TolQ/ExbB proton channel family protein compare
ABZR88_RS17620 -0.4 -2.2 glycosyltransferase compare
ABZR88_RS02860 -0.4 -1.2 hypothetical protein compare
ABZR88_RS15735 -0.4 -0.8 TonB-dependent receptor compare
ABZR88_RS20585 -0.4 -1.6 TetR/AcrR family transcriptional regulator compare
ABZR88_RS12895 -0.4 -1.1 FecR family protein compare
ABZR88_RS12460 -0.4 -0.9 6-phosphofructokinase compare
ABZR88_RS18270 -0.4 -1.1 DUF4292 domain-containing protein compare
ABZR88_RS18420 -0.4 -1.4 DUF6427 family protein compare
ABZR88_RS04255 -0.4 -0.5 YciI family protein compare
ABZR88_RS05845 -0.4 -1.0 AraC family transcriptional regulator compare
ABZR88_RS08610 -0.4 -1.9 hypothetical protein compare
ABZR88_RS10905 -0.4 -0.7 hypothetical protein compare
ABZR88_RS16740 -0.4 -1.3 recombinase RecA compare
ABZR88_RS21115 -0.4 -1.2 GIY-YIG nuclease family protein compare
ABZR88_RS21570 -0.4 -1.0 hypothetical protein compare
ABZR88_RS21825 -0.4 -1.5 phosphonate ABC transporter, permease protein PhnE compare
ABZR88_RS10175 -0.4 -0.5 hypothetical protein compare
ABZR88_RS21790 -0.4 -0.4 phosphonate C-P lyase system protein PhnL compare
ABZR88_RS22200 -0.4 -2.0 leucyl/phenylalanyl-tRNA--protein transferase compare
ABZR88_RS15000 -0.4 -2.5 response regulator transcription factor compare
ABZR88_RS09355 -0.4 -1.9 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB compare
ABZR88_RS14900 -0.4 -1.0 peroxiredoxin compare
ABZR88_RS02375 -0.4 -0.8 DUF3892 domain-containing protein compare
ABZR88_RS20730 -0.4 -0.6 flavodoxin reductase compare
ABZR88_RS05630 -0.4 -2.1 PAS domain-containing sensor histidine kinase compare
ABZR88_RS08205 -0.4 -1.2 molybdopterin cofactor-binding domain-containing protein compare
ABZR88_RS07825 -0.4 -1.9 hypothetical protein compare
ABZR88_RS01925 -0.4 -1.0 DUF47 domain-containing protein compare
ABZR88_RS08705 -0.4 -0.9 UDP-glucose 4-epimerase GalE compare
ABZR88_RS06325 -0.4 -2.1 glycosyltransferase family 39 protein compare
ABZR88_RS10765 -0.4 -0.4 hypothetical protein compare
ABZR88_RS18800 -0.4 -0.9 hypothetical protein compare
ABZR88_RS19525 -0.4 -1.2 NAD(P)H-dependent oxidoreductase compare
ABZR88_RS05160 -0.4 -0.8 aquaporin compare
ABZR88_RS15170 -0.4 -1.1 hypothetical protein compare
ABZR88_RS09160 -0.4 -1.2 SRPBCC domain-containing protein compare
ABZR88_RS20525 -0.4 -1.7 nicotinamide riboside transporter PnuC compare
ABZR88_RS10900 -0.4 -0.8 hypothetical protein compare
ABZR88_RS17025 -0.4 -2.0 thymidine kinase compare
ABZR88_RS20575 -0.4 -1.4 glutathione peroxidase compare
ABZR88_RS02595 -0.4 -1.0 hypothetical protein compare
ABZR88_RS02215 -0.4 -1.0 hypothetical protein compare
ABZR88_RS00020 -0.4 -0.7 RNA polymerase sigma factor compare
ABZR88_RS07265 -0.4 -1.0 family 16 glycosylhydrolase compare
ABZR88_RS03310 -0.4 -0.5 hypothetical protein compare
ABZR88_RS07535 -0.4 -0.4 3'-5' exonuclease compare
ABZR88_RS03105 -0.4 -1.2 response regulator transcription factor compare
ABZR88_RS08680 -0.4 -1.5 substrate-binding domain-containing protein compare
ABZR88_RS10440 -0.4 -1.2 protein-glutamate O-methyltransferase CheR compare
ABZR88_RS07560 -0.4 -0.4 SdiA-regulated domain-containing protein compare
ABZR88_RS07760 -0.4 -1.1 SHOCT domain-containing protein compare
ABZR88_RS03755 -0.4 -1.3 carbohydrate kinase compare
ABZR88_RS16590 -0.4 -1.3 cytochrome B compare
ABZR88_RS21470 -0.3 -1.3 NEW3 domain-containing protein compare
ABZR88_RS06150 -0.3 -1.3 hypothetical protein compare
ABZR88_RS00805 -0.3 -0.9 Nramp family divalent metal transporter compare
ABZR88_RS14960 -0.3 -1.5 dihydrofolate reductase family protein compare
ABZR88_RS00935 -0.3 -0.8 acyl-CoA thioesterase compare
ABZR88_RS01245 -0.3 -0.5 NUDIX hydrolase compare
ABZR88_RS10625 -0.3 -0.4 Ig-like domain-containing protein compare
ABZR88_RS17225 -0.3 -0.8 hypothetical protein compare
ABZR88_RS19365 -0.3 -1.8 acyl carrier protein compare
ABZR88_RS15510 -0.3 -1.0 cupin domain-containing protein compare
ABZR88_RS02450 -0.3 -0.7 MobC family plasmid mobilization relaxosome protein compare
ABZR88_RS04415 -0.3 -0.8 glycosyltransferase compare
ABZR88_RS14110 -0.3 -0.6 preprotein translocase subunit YajC compare
ABZR88_RS05315 -0.3 -1.3 RtcB family protein compare


Specific Phenotypes

None in this experiment

For Mucilaginibacter yixingensis YX-36 DSM 26809 in stress experiments

For stress Trimethoprim across organisms