Experiment set1S635 for Mucilaginibacter yixingensis YX-36 DSM 26809

Compare to:

Trimethoprim stress 0.05 mg/ml

200 most detrimental genes:

  gene name fitness t score description  
ABZR88_RS13785 +8.0 2.1 SRPBCC domain-containing protein compare
ABZR88_RS19830 +7.7 58.9 SusC/RagA family TonB-linked outer membrane protein compare
ABZR88_RS06575 +3.3 2.5 cupin domain-containing protein compare
ABZR88_RS14555 +3.2 1.9 response regulator compare
ABZR88_RS19825 +2.2 2.7 SusD/RagB family nutrient-binding outer membrane lipoprotein compare
ABZR88_RS11915 +1.9 2.0 hypothetical protein compare
ABZR88_RS15800 +1.8 1.2 N-acetylmuramoyl-L-alanine amidase compare
ABZR88_RS11440 +1.7 1.7 GNAT family N-acetyltransferase compare
ABZR88_RS13705 +1.7 1.8 DoxX family protein compare
ABZR88_RS12055 +1.7 1.5 DUF1345 domain-containing protein compare
ABZR88_RS04605 +1.5 1.1 cytidine deaminase compare
ABZR88_RS16290 +1.5 4.6 helix-turn-helix domain-containing protein compare
ABZR88_RS10580 +1.5 3.4 DNA mismatch repair protein MutS compare
ABZR88_RS11745 +1.5 1.0 GNAT family N-acetyltransferase compare
ABZR88_RS02995 +1.4 9.9 phosphatase PAP2 family protein compare
ABZR88_RS12115 +1.4 2.0 hypothetical protein compare
ABZR88_RS04795 +1.4 1.4 SRPBCC family protein compare
ABZR88_RS14740 +1.4 1.5 hypothetical protein compare
ABZR88_RS00440 +1.3 1.5 acyl-CoA thioesterase compare
ABZR88_RS09065 +1.2 1.5 alpha/beta hydrolase domain-containing protein compare
ABZR88_RS08415 +1.2 1.6 c-type cytochrome compare
ABZR88_RS03715 +1.2 1.5 OmpA family protein compare
ABZR88_RS12530 +1.1 3.0 (2Fe-2S) ferredoxin domain-containing protein compare
ABZR88_RS13710 +1.1 1.8 DUF4468 domain-containing protein compare
ABZR88_RS16625 +1.1 5.5 6-carboxytetrahydropterin synthase compare
ABZR88_RS20380 +1.0 1.2 GNAT family N-acetyltransferase compare
ABZR88_RS20265 +1.0 1.6 D-aminoacyl-tRNA deacylase compare
ABZR88_RS04320 +1.0 2.1 NifU family protein compare
ABZR88_RS21750 +0.9 1.3 phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN compare
ABZR88_RS07755 +0.9 3.5 DUF4290 domain-containing protein compare
ABZR88_RS17375 +0.9 1.3 TraB/GumN family protein compare
ABZR88_RS12230 +0.9 1.1 hypothetical protein compare
ABZR88_RS11610 +0.9 1.9 2-isopropylmalate synthase compare
ABZR88_RS18785 +0.9 1.7 lipopolysaccharide assembly protein LapB compare
ABZR88_RS19115 +0.9 1.1 hypothetical protein compare
ABZR88_RS01065 +0.9 1.4 IS200/IS605 family transposase compare
ABZR88_RS12065 +0.8 1.6 HAD domain-containing protein compare
ABZR88_RS19640 +0.8 1.0 hypothetical protein compare
ABZR88_RS10240 +0.8 1.4 lysophospholipid acyltransferase family protein compare
ABZR88_RS12245 +0.8 1.3 multidrug resistance efflux transporter family protein compare
ABZR88_RS10475 +0.8 1.2 gamma-glutamylcyclotransferase compare
ABZR88_RS03000 +0.8 3.5 sterol desaturase family protein compare
ABZR88_RS00595 +0.8 1.2 hypothetical protein compare
ABZR88_RS21520 +0.8 1.1 DUF4382 domain-containing protein compare
ABZR88_RS17600 +0.7 1.5 hypothetical protein compare
ABZR88_RS03010 +0.7 3.3 CDP-alcohol phosphatidyltransferase family protein compare
ABZR88_RS15645 +0.7 3.5 MFS transporter compare
ABZR88_RS09520 +0.7 2.8 hypothetical protein compare
ABZR88_RS09140 +0.7 1.3 DinB family protein compare
ABZR88_RS09900 +0.7 2.4 SRPBCC domain-containing protein compare
ABZR88_RS05790 +0.7 1.4 response regulator compare
ABZR88_RS06855 +0.7 1.1 imidazole glycerol phosphate synthase subunit HisF compare
ABZR88_RS04025 +0.7 1.5 RNA polymerase sigma factor compare
ABZR88_RS10200 +0.7 1.0 YigZ family protein compare
ABZR88_RS19680 +0.7 1.9 helix-turn-helix transcriptional regulator compare
ABZR88_RS04350 +0.7 1.1 alpha/beta fold hydrolase compare
ABZR88_RS19205 +0.7 2.3 TraR/DksA C4-type zinc finger protein compare
ABZR88_RS02030 +0.7 0.9 NADPH-dependent FMN reductase compare
ABZR88_RS08435 +0.7 3.4 fasciclin domain-containing protein compare
ABZR88_RS15570 +0.6 1.3 type I restriction enzyme HsdR N-terminal domain-containing protein compare
ABZR88_RS14720 +0.6 1.1 RNA polymerase sigma factor compare
ABZR88_RS13335 +0.6 1.5 alpha/beta hydrolase compare
ABZR88_RS22315 +0.6 1.6 TPM domain-containing protein compare
ABZR88_RS14475 +0.6 2.0 hypothetical protein compare
ABZR88_RS04835 +0.6 1.0 hypothetical protein compare
ABZR88_RS04455 +0.6 1.4 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
ABZR88_RS20460 +0.6 1.8 hypothetical protein compare
ABZR88_RS08880 +0.6 0.8 hypothetical protein compare
ABZR88_RS18910 +0.6 1.1 SRPBCC domain-containing protein compare
ABZR88_RS02965 +0.6 1.2 HAD family hydrolase compare
ABZR88_RS03165 +0.6 0.7 hypothetical protein compare
ABZR88_RS02880 +0.6 2.7 glycoside hydrolase family 25 protein compare
ABZR88_RS15595 +0.6 1.6 bacillithiol biosynthesis deacetylase BshB1 compare
ABZR88_RS05915 +0.6 2.5 hypothetical protein compare
ABZR88_RS19760 +0.6 2.0 exodeoxyribonuclease III compare
ABZR88_RS13950 +0.6 1.4 histidine phosphatase family protein compare
ABZR88_RS15245 +0.6 1.4 ABC transporter substrate-binding protein compare
ABZR88_RS20855 +0.6 1.9 hypothetical protein compare
ABZR88_RS14905 +0.6 1.3 hypothetical protein compare
ABZR88_RS06800 +0.6 1.8 YceI family protein compare
ABZR88_RS07500 +0.6 1.2 glycoside hydrolase N-terminal domain-containing protein compare
ABZR88_RS02230 +0.6 2.5 hypothetical protein compare
ABZR88_RS19905 +0.6 3.2 HD domain-containing protein compare
ABZR88_RS07595 +0.6 1.3 PAS domain S-box protein compare
ABZR88_RS02260 +0.6 2.1 hypothetical protein compare
ABZR88_RS02250 +0.6 1.0 hypothetical protein compare
ABZR88_RS14210 +0.6 1.6 hypothetical protein compare
ABZR88_RS16185 +0.6 1.1 Ldh family oxidoreductase compare
ABZR88_RS12420 +0.5 1.2 Arm DNA-binding domain-containing protein compare
ABZR88_RS02920 +0.5 0.8 LytTR family DNA-binding domain-containing protein compare
ABZR88_RS08440 +0.5 1.0 DUF5655 domain-containing protein compare
ABZR88_RS21465 +0.5 1.7 ATP-binding protein compare
ABZR88_RS10160 +0.5 1.4 RNA polymerase sigma factor compare
ABZR88_RS00080 +0.5 1.8 hypothetical protein compare
ABZR88_RS06250 +0.5 1.5 sialate O-acetylesterase compare
ABZR88_RS00640 +0.5 1.4 serine hydroxymethyltransferase compare
ABZR88_RS19075 +0.5 0.9 LysR substrate-binding domain-containing protein compare
ABZR88_RS09385 +0.5 0.9 hypothetical protein compare
ABZR88_RS06495 +0.5 0.8 hypothetical protein compare
ABZR88_RS20295 +0.5 1.8 hypothetical protein compare
ABZR88_RS18970 +0.5 1.6 hypothetical protein compare
ABZR88_RS19390 +0.5 2.2 hypothetical protein compare
ABZR88_RS19300 +0.5 2.0 beta-ketoacyl synthase chain length factor compare
ABZR88_RS01295 +0.5 1.6 hypothetical protein compare
ABZR88_RS03400 +0.5 1.5 methionine aminotransferase compare
ABZR88_RS11615 +0.5 1.5 threonine ammonia-lyase IlvA compare
ABZR88_RS20050 +0.5 2.3 gliding motility lipoprotein GldD compare
ABZR88_RS15915 +0.5 1.5 hypothetical protein compare
ABZR88_RS10165 +0.5 1.3 hypothetical protein compare
ABZR88_RS19055 +0.5 2.0 efflux RND transporter periplasmic adaptor subunit compare
ABZR88_RS05400 +0.5 1.5 cupin domain-containing protein compare
ABZR88_RS22160 +0.5 2.8 DUF6515 family protein compare
ABZR88_RS05660 +0.5 1.9 sensor histidine kinase compare
ABZR88_RS14680 +0.5 2.0 hypothetical protein compare
ABZR88_RS13070 +0.5 1.5 sigma-54 dependent transcriptional regulator compare
ABZR88_RS03330 +0.5 1.0 hypothetical protein compare
ABZR88_RS03005 +0.5 0.7 DUF4833 domain-containing protein compare
ABZR88_RS11385 +0.5 1.9 nuclear transport factor 2 family protein compare
ABZR88_RS06195 +0.5 2.4 TIM barrel protein compare
ABZR88_RS13460 +0.5 2.2 glycoside hydrolase 43 family protein compare
ABZR88_RS15345 +0.5 1.6 secondary thiamine-phosphate synthase enzyme YjbQ compare
ABZR88_RS05970 +0.5 2.5 RNA polymerase sigma factor compare
ABZR88_RS02770 +0.5 1.0 LexA family transcriptional regulator compare
ABZR88_RS17580 +0.5 3.7 hypothetical protein compare
ABZR88_RS03060 +0.5 2.3 hypothetical protein compare
ABZR88_RS19835 +0.5 2.0 PadR family transcriptional regulator compare
ABZR88_RS13805 +0.5 1.3 hypothetical protein compare
ABZR88_RS16920 +0.4 3.3 Crp/Fnr family transcriptional regulator compare
ABZR88_RS15070 +0.4 1.1 SDR family oxidoreductase compare
ABZR88_RS09870 +0.4 0.9 aspartate kinase compare
ABZR88_RS08255 +0.4 1.4 hypothetical protein compare
ABZR88_RS16010 +0.4 1.0 TolC family protein compare
ABZR88_RS17355 +0.4 1.5 sensor histidine kinase compare
ABZR88_RS16065 +0.4 2.7 ABC transporter ATP-binding protein compare
ABZR88_RS12900 +0.4 1.5 RNA polymerase sigma factor compare
ABZR88_RS13575 +0.4 1.9 VIT1/CCC1 transporter family protein compare
ABZR88_RS04210 +0.4 1.9 gliding motility lipoprotein GldB compare
ABZR88_RS04895 +0.4 1.6 ATP-binding protein compare
ABZR88_RS21610 +0.4 1.0 asparaginase compare
ABZR88_RS04330 +0.4 1.2 TetR/AcrR family transcriptional regulator compare
ABZR88_RS10920 +0.4 1.0 metallophosphoesterase compare
ABZR88_RS18890 +0.4 1.3 fasciclin domain-containing protein compare
ABZR88_RS13055 +0.4 1.4 UxaA family hydrolase compare
ABZR88_RS19350 +0.4 1.1 SDR family oxidoreductase compare
ABZR88_RS10805 +0.4 2.0 rhomboid family intramembrane serine protease compare
ABZR88_RS14770 +0.4 2.0 rhodanese-like domain-containing protein compare
ABZR88_RS12795 +0.4 2.5 UDP-galactopyranose mutase compare
ABZR88_RS09835 +0.4 1.2 Sir2 family NAD-dependent protein deacetylase compare
ABZR88_RS00210 +0.4 1.3 carbon-nitrogen hydrolase family protein compare
ABZR88_RS00670 +0.4 0.6 DUF2625 domain-containing protein compare
ABZR88_RS14450 +0.4 0.5 hypothetical protein compare
ABZR88_RS03540 +0.4 1.5 hypothetical protein compare
ABZR88_RS06615 +0.4 1.7 ABC transporter ATP-binding protein compare
ABZR88_RS14665 +0.4 0.5 type II toxin-antitoxin system RelE/ParE family toxin compare
ABZR88_RS15590 +0.4 1.4 histone H1 compare
ABZR88_RS11325 +0.4 1.2 VOC family protein compare
ABZR88_RS12760 +0.4 2.1 non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase compare
ABZR88_RS01990 +0.4 1.9 DUF4197 domain-containing protein compare
ABZR88_RS18600 +0.4 1.5 helix-turn-helix transcriptional regulator compare
ABZR88_RS02055 +0.4 2.8 signal peptidase I compare
ABZR88_RS12480 +0.4 1.5 hypothetical protein compare
ABZR88_RS17085 +0.4 1.6 16S rRNA (uracil(1498)-N(3))-methyltransferase compare
ABZR88_RS06705 +0.4 1.7 Dps family protein compare
ABZR88_RS09510 +0.4 0.9 MFS transporter compare
ABZR88_RS07460 +0.4 1.0 hypothetical protein compare
ABZR88_RS00225 +0.4 2.7 RNA methyltransferase compare
ABZR88_RS11435 +0.4 1.3 DUF4442 domain-containing protein compare
ABZR88_RS06885 +0.4 1.0 ATP phosphoribosyltransferase compare
ABZR88_RS00435 +0.4 0.6 hypothetical protein compare
ABZR88_RS06295 +0.4 0.9 family 43 glycosylhydrolase compare
ABZR88_RS10005 +0.4 1.6 isoprenylcysteine carboxyl methyltransferase family protein compare
ABZR88_RS21280 +0.4 1.0 hypothetical protein compare
ABZR88_RS18740 +0.4 2.0 putative toxin-antitoxin system toxin component, PIN family compare
ABZR88_RS17590 +0.4 1.7 glycosyltransferase family 4 protein compare
ABZR88_RS02540 +0.4 2.2 hypothetical protein compare
ABZR88_RS18470 +0.4 1.6 DUF5684 domain-containing protein compare
ABZR88_RS18995 +0.4 1.5 L-rhamnose mutarotase compare
ABZR88_RS07290 +0.4 1.6 TonB-dependent receptor compare
ABZR88_RS14155 +0.4 1.3 redox-regulated ATPase YchF compare
ABZR88_RS19060 +0.4 1.4 MarR family winged helix-turn-helix transcriptional regulator compare
ABZR88_RS16415 +0.4 0.9 sensor histidine kinase compare
ABZR88_RS11785 +0.4 1.4 SDR family NAD(P)-dependent oxidoreductase compare
ABZR88_RS00095 +0.4 1.0 hypothetical protein compare
ABZR88_RS19570 +0.4 2.1 hypothetical protein compare
ABZR88_RS20060 +0.4 1.4 pitrilysin family protein compare
ABZR88_RS06940 +0.4 1.8 hypothetical protein compare
ABZR88_RS03160 +0.4 1.0 glycoside hydrolase family 3 C-terminal domain-containing protein compare
ABZR88_RS01270 +0.4 0.7 30S ribosomal protein S2 compare
ABZR88_RS18580 +0.4 1.3 hypothetical protein compare
ABZR88_RS09920 +0.4 1.1 VOC family protein compare
ABZR88_RS11825 +0.4 1.6 HipA family kinase compare
ABZR88_RS06660 +0.4 1.3 hypothetical protein compare
ABZR88_RS04625 +0.4 0.9 class I SAM-dependent methyltransferase compare
ABZR88_RS16245 +0.4 1.5 ATP-binding cassette domain-containing protein compare
ABZR88_RS09165 +0.4 2.0 bifunctional nuclease family protein compare
ABZR88_RS15760 +0.4 1.3 glutamate racemase compare
ABZR88_RS19530 +0.4 2.0 biosynthetic peptidoglycan transglycosylase compare
ABZR88_RS18565 +0.4 0.7 hypothetical protein compare
ABZR88_RS18545 +0.4 0.6 hypothetical protein compare
ABZR88_RS00760 +0.4 1.3 YjjG family noncanonical pyrimidine nucleotidase compare


Specific Phenotypes

None in this experiment

For Mucilaginibacter yixingensis YX-36 DSM 26809 in stress experiments

For stress Trimethoprim across organisms