Experiment set1S63 for Azospirillum sp. SherDot2

Compare to:

NL-CCM; high oxygen

200 most important genes:

  gene name fitness t score description  
MPMX19_03822 -2.5 -3.7 Sulfur carrier protein FdhD compare
MPMX19_02267 -1.9 -1.8 hypothetical protein compare
MPMX19_01054 -1.7 -6.3 Aspartate carbamoyltransferase compare
MPMX19_02218 -1.7 -2.5 hypothetical protein compare
MPMX19_01053 -1.6 -3.8 Dihydroorotase compare
MPMX19_01703 -1.5 -1.3 hypothetical protein compare
MPMX19_00705 -1.5 -3.3 Cell division coordinator CpoB compare
MPMX19_03906 -1.5 -10.9 Pca regulon regulatory protein compare
MPMX19_02303 -1.5 -2.6 hypothetical protein compare
MPMX19_01597 -1.5 -2.8 23S rRNA (uridine(2479)-2'-O)-methyltransferase compare
MPMX19_06985 -1.5 -2.6 L-malyl-CoA/beta-methylmalyl-CoA lyase compare
MPMX19_03609 -1.5 -3.2 HTH-type transcriptional repressor NagR compare
MPMX19_00128 -1.4 -9.1 hypothetical protein compare
MPMX19_03722 -1.3 -2.4 hypothetical protein compare
MPMX19_01545 -1.3 -1.7 Lon protease compare
MPMX19_03425 -1.3 -2.1 hypothetical protein compare
MPMX19_00530 -1.3 -2.5 Orotate phosphoribosyltransferase compare
MPMX19_05387 -1.2 -2.6 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
MPMX19_02177 -1.2 -3.3 Succinylornithine transaminase/acetylornithine aminotransferase compare
MPMX19_00718 -1.2 -2.3 hypothetical protein compare
MPMX19_00126 -1.2 -3.0 hypothetical protein compare
MPMX19_01560 -1.2 -2.2 3'-5' exonuclease DinG compare
MPMX19_02816 -1.2 -2.2 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_04835 -1.2 -2.5 hypothetical protein compare
MPMX19_06202 -1.1 -2.0 hypothetical protein compare
MPMX19_00813 -1.1 -2.2 HTH-type transcriptional regulator CysL compare
MPMX19_06546 -1.1 -2.6 hypothetical protein compare
MPMX19_00687 -1.1 -1.8 hypothetical protein compare
MPMX19_02664 -1.1 -1.6 Arabinose 5-phosphate isomerase KdsD compare
MPMX19_06490 -1.0 -1.8 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_04492 -1.0 -3.0 hypothetical protein compare
MPMX19_01630 -1.0 -3.4 Phosphoribosylamine--glycine ligase compare
MPMX19_03694 -1.0 -1.8 hypothetical protein compare
MPMX19_04171 -1.0 -2.2 16S ribosomal RNA compare
MPMX19_00170 -1.0 -3.0 hypothetical protein compare
MPMX19_00304 -1.0 -2.6 Phosphatidylcholine synthase compare
MPMX19_02516 -1.0 -3.5 hypothetical protein compare
MPMX19_00142 -1.0 -1.4 hypothetical protein compare
MPMX19_01014 -1.0 -4.1 Indole-3-glycerol phosphate synthase compare
MPMX19_01714 -0.9 -1.4 tRNA-modifying protein YgfZ compare
MPMX19_01777 -0.9 -2.4 2-aminoadipate transaminase compare
MPMX19_06700 -0.9 -2.0 Copper-sensing transcriptional repressor RicR compare
MPMX19_02981 -0.9 -4.0 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_01395 -0.9 -1.7 hypothetical protein compare
MPMX19_00190 -0.9 -2.8 hypothetical protein compare
MPMX19_00236 -0.9 -2.7 HTH-type transcriptional regulator IscR compare
MPMX19_03803 -0.9 -1.4 hypothetical protein compare
MPMX19_03859 -0.9 -2.2 hypothetical protein compare
MPMX19_01015 -0.9 -3.6 Anthranilate phosphoribosyltransferase compare
MPMX19_01304 -0.9 -5.7 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX19_04949 -0.9 -3.3 Leu/Ile/Val-binding protein compare
MPMX19_01998 -0.9 -3.9 3-isopropylmalate dehydratase large subunit compare
MPMX19_03096 -0.9 -1.7 hypothetical protein compare
MPMX19_00695 -0.9 -2.3 putative transcriptional regulatory protein compare
MPMX19_00329 -0.8 -3.5 Putative membrane protein insertion efficiency factor compare
MPMX19_03788 -0.8 -3.5 hypothetical protein compare
MPMX19_02136 -0.8 -1.3 Phage shock protein A compare
MPMX19_05459 -0.8 -1.3 hypothetical protein compare
MPMX19_00503 -0.8 -3.2 ATP-dependent Clp protease ATP-binding subunit ClpA compare
MPMX19_00262 -0.8 -1.6 Thiazole synthase compare
MPMX19_06819 -0.8 -1.8 hypothetical protein compare
MPMX19_00714 -0.8 -4.2 Ferrous-iron efflux pump FieF compare
MPMX19_02543 -0.8 -1.3 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX19_02484 -0.8 -1.4 Heat-inducible transcription repressor HrcA compare
MPMX19_05442 -0.8 -2.1 Ribosomal large subunit pseudouridine synthase D compare
MPMX19_01085 -0.8 -3.6 hypothetical protein compare
MPMX19_03642 -0.8 -1.1 hypothetical protein compare
MPMX19_00906 -0.8 -5.9 Amidophosphoribosyltransferase compare
MPMX19_05044 -0.8 -1.6 hypothetical protein compare
MPMX19_06419 -0.8 -1.8 IS110 family transposase ISHne3 compare
MPMX19_04325 -0.8 -3.5 hypothetical protein compare
MPMX19_06933 -0.8 -1.5 Manganese transport system ATP-binding protein MntB compare
MPMX19_01208 -0.8 -4.8 hypothetical protein compare
MPMX19_06211 -0.8 -1.7 tRNA-Ala compare
MPMX19_05872 -0.8 -1.6 Redox-sensitive transcriptional activator SoxR compare
MPMX19_03538 -0.8 -2.6 HTH-type transcriptional repressor NagR compare
MPMX19_02084 -0.7 -1.1 hypothetical protein compare
MPMX19_02980 -0.7 -1.5 Hydrogen cyanide synthase subunit HcnA compare
MPMX19_03157 -0.7 -1.3 hypothetical protein compare
MPMX19_01342 -0.7 -2.0 hypothetical protein compare
MPMX19_05355 -0.7 -2.5 Transcriptional regulator SlyA compare
MPMX19_02388 -0.7 -2.2 hypothetical protein compare
MPMX19_02095 -0.7 -2.1 Ferric uptake regulation protein compare
MPMX19_02268 -0.7 -2.4 hypothetical protein compare
MPMX19_05358 -0.7 -1.0 hypothetical protein compare
MPMX19_02320 -0.7 -1.4 HTH-type transcriptional regulator GltR compare
MPMX19_02115 -0.7 -2.4 hypothetical protein compare
MPMX19_04779 -0.7 -1.5 hypothetical protein compare
MPMX19_05362 -0.7 -1.5 hypothetical protein compare
MPMX19_01883 -0.7 -3.8 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_00478 -0.7 -1.2 putative protein RP812 compare
MPMX19_02946 -0.7 -2.7 Ribulose-phosphate 3-epimerase compare
MPMX19_00240 -0.7 -1.8 hypothetical protein compare
MPMX19_03499 -0.7 -1.9 Formate dehydrogenase, cytochrome b556(fdo) subunit compare
MPMX19_04043 -0.7 -1.9 Aldehyde-alcohol dehydrogenase compare
MPMX19_01423 -0.7 -1.5 hypothetical protein compare
MPMX19_05352 -0.7 -1.6 putative cysteine-rich protein YhjQ compare
MPMX19_05445 -0.7 -2.1 tRNA-Glu compare
MPMX19_06567 -0.7 -1.6 hypothetical protein compare
MPMX19_01415 -0.7 -2.0 hypothetical protein compare
MPMX19_03806 -0.7 -1.7 hypothetical protein compare
MPMX19_01277 -0.7 -3.5 hypothetical protein compare
MPMX19_04898 -0.7 -2.1 Transcriptional regulatory protein LnrK compare
MPMX19_00511 -0.7 -2.6 hypothetical protein compare
MPMX19_01330 -0.7 -1.9 3-mercaptopyruvate sulfurtransferase compare
MPMX19_02607 -0.7 -2.4 hypothetical protein compare
MPMX19_00576 -0.6 -1.5 hypothetical protein compare
MPMX19_03531 -0.6 -1.8 PCP degradation transcriptional activation protein compare
MPMX19_03039 -0.6 -1.5 Cyclic AMP receptor protein compare
MPMX19_02567 -0.6 -3.7 hypothetical protein compare
MPMX19_00748 -0.6 -2.0 Organic hydroperoxide resistance transcriptional regulator compare
MPMX19_03276 -0.6 -1.4 hypothetical protein compare
MPMX19_06954 -0.6 -1.2 hypothetical protein compare
MPMX19_04917 -0.6 -2.7 Alcohol dehydrogenase compare
MPMX19_00260 -0.6 -1.3 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_03601 -0.6 -2.6 Hydantoin racemase compare
MPMX19_04610 -0.6 -1.5 putative enoyl-CoA hydratase 1 compare
MPMX19_01503 -0.6 -1.6 hypothetical protein compare
MPMX19_01748 -0.6 -1.6 hypothetical protein compare
MPMX19_05013 -0.6 -2.6 Cytochrome b compare
MPMX19_02618 -0.6 -1.3 Transcriptional regulatory protein BaeR compare
MPMX19_00234 -0.6 -1.5 hypothetical protein compare
MPMX19_04963 -0.6 -1.0 Cysteine desulfurase IscS compare
MPMX19_03916 -0.6 -1.5 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
MPMX19_02105 -0.6 -1.7 hypothetical protein compare
MPMX19_05727 -0.6 -3.1 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX19_04940 -0.6 -3.4 Histidine ammonia-lyase compare
MPMX19_04161 -0.6 -1.5 hypothetical protein compare
MPMX19_00680 -0.6 -1.3 Elongation factor P--(R)-beta-lysine ligase compare
MPMX19_01499 -0.6 -1.6 hypothetical protein compare
MPMX19_00838 -0.6 -1.4 GTP pyrophosphokinase rsh compare
MPMX19_04843 -0.6 -2.7 hypothetical protein compare
MPMX19_05967 -0.6 -1.9 D-erythritol 1-phosphate dehydrogenase compare
MPMX19_00089 -0.6 -1.6 hypothetical protein compare
MPMX19_06266 -0.6 -1.3 hypothetical protein compare
MPMX19_04647 -0.6 -1.7 hypothetical protein compare
MPMX19_01822 -0.6 -2.9 2-isopropylmalate synthase compare
MPMX19_04696 -0.6 -1.3 Na(+)/H(+) antiporter subunit C1 compare
MPMX19_06111 -0.6 -2.4 Non-motile and phage-resistance protein compare
MPMX19_04457 -0.6 -2.6 Pyruvate, phosphate dikinase compare
MPMX19_00122 -0.6 -1.8 hypothetical protein compare
MPMX19_01075 -0.6 -0.9 Molybdopterin synthase sulfur carrier subunit compare
MPMX19_02657 -0.6 -5.0 Glutamate synthase [NADPH] large chain compare
MPMX19_04682 -0.6 -0.7 hypothetical protein compare
MPMX19_05915 -0.6 -1.6 Flagellar M-ring protein compare
MPMX19_04694 -0.6 -1.7 Na(+)/H(+) antiporter subunit E1 compare
MPMX19_02235 -0.6 -1.6 tRNA-Ala compare
MPMX19_00633 -0.6 -3.0 Intermembrane phospholipid transport system lipoprotein MlaA compare
MPMX19_04085 -0.5 -1.6 hypothetical protein compare
MPMX19_03586 -0.5 -1.4 HTH-type transcriptional repressor ComR compare
MPMX19_00166 -0.5 -0.9 hypothetical protein compare
MPMX19_02706 -0.5 -2.2 hypothetical protein compare
MPMX19_06195 -0.5 -1.1 hypothetical protein compare
MPMX19_06926 -0.5 -1.9 hypothetical protein compare
MPMX19_04996 -0.5 -1.2 hypothetical protein compare
MPMX19_06863 -0.5 -2.1 hypothetical protein compare
MPMX19_04636 -0.5 -1.0 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_01886 -0.5 -3.8 Metalloprotease PmbA compare
MPMX19_03634 -0.5 -1.4 Arginase compare
MPMX19_03631 -0.5 -1.0 hypothetical protein compare
MPMX19_02241 -0.5 -1.4 hypothetical protein compare
MPMX19_02658 -0.5 -3.9 Glutamate synthase [NADPH] small chain compare
MPMX19_05070 -0.5 -2.4 hypothetical protein compare
MPMX19_01297 -0.5 -1.2 hypothetical protein compare
MPMX19_04889 -0.5 -2.8 Chromosome partition protein Smc compare
MPMX19_00132 -0.5 -2.0 hypothetical protein compare
MPMX19_05796 -0.5 -1.7 HTH-type transcriptional repressor BdcR compare
MPMX19_00475 -0.5 -1.1 hypothetical protein compare
MPMX19_00933 -0.5 -1.8 hypothetical protein compare
MPMX19_02577 -0.5 -3.8 sugar efflux transporter compare
MPMX19_03389 -0.5 -1.8 Carbon monoxide dehydrogenase small chain compare
MPMX19_05023 -0.5 -1.0 hypothetical protein compare
MPMX19_03184 -0.5 -2.4 hypothetical protein compare
MPMX19_06723 -0.5 -1.9 hypothetical protein compare
MPMX19_06044 -0.5 -1.0 hypothetical protein compare
MPMX19_05432 -0.5 -2.2 hypothetical protein compare
MPMX19_05874 -0.5 -2.1 2-keto-4-pentenoate hydratase compare
MPMX19_03367 -0.5 -1.5 Magnetosome membrane protein 22 compare
MPMX19_04681 -0.5 -1.4 5-hydroxyisourate hydrolase compare
MPMX19_02505 -0.5 -3.3 Protein-methionine-sulfoxide reductase catalytic subunit MsrP compare
MPMX19_03870 -0.5 -0.9 L-aspartate dehydrogenase compare
MPMX19_02642 -0.5 -2.4 hypothetical protein compare
MPMX19_00794 -0.5 -1.5 Transcriptional activator protein CopR compare
MPMX19_02297 -0.5 -2.3 hypothetical protein compare
MPMX19_01376 -0.5 -1.0 hypothetical protein compare
MPMX19_05359 -0.5 -2.9 hypothetical protein compare
MPMX19_03007 -0.5 -2.0 Arabinose import ATP-binding protein AraG compare
MPMX19_03735 -0.5 -2.0 Transposon Tn10 TetC protein compare
MPMX19_01196 -0.5 -1.8 hypothetical protein compare
MPMX19_00182 -0.5 -0.7 hypothetical protein compare
MPMX19_01718 -0.5 -1.1 Ribosomal large subunit pseudouridine synthase C compare
MPMX19_02300 -0.5 -1.5 Transcription elongation factor GreA compare
MPMX19_03599 -0.5 -1.9 2-amino-5-chloromuconic acid deaminase compare
MPMX19_03646 -0.5 -2.2 Histidinol-phosphate aminotransferase compare
MPMX19_01654 -0.5 -3.2 HTH-type transcriptional regulator IscR compare
MPMX19_05691 -0.5 -2.8 hypothetical protein compare
MPMX19_05601 -0.5 -1.8 putative ABC transporter ATP-binding protein YejF compare
MPMX19_00846 -0.5 -1.3 hypothetical protein compare
MPMX19_06971 -0.5 -2.0 Macrolide export ATP-binding/permease protein MacB compare
MPMX19_06314 -0.5 -2.9 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm; high oxygen experiments