Experiment set1S62 for Azospirillum sp. SherDot2

Compare to:

NL-CCM; high oxygen

200 most important genes:

  gene name fitness t score description  
MPMX19_03906 -2.5 -15.2 Pca regulon regulatory protein compare
MPMX19_00530 -2.1 -4.2 Orotate phosphoribosyltransferase compare
MPMX19_01125 -1.9 -1.8 hypothetical protein compare
MPMX19_00128 -1.5 -9.9 hypothetical protein compare
MPMX19_06916 -1.5 -2.6 Crotonyl-CoA hydratase compare
MPMX19_00705 -1.5 -3.0 Cell division coordinator CpoB compare
MPMX19_05044 -1.5 -2.5 hypothetical protein compare
MPMX19_00304 -1.4 -3.2 Phosphatidylcholine synthase compare
MPMX19_01597 -1.4 -2.5 23S rRNA (uridine(2479)-2'-O)-methyltransferase compare
MPMX19_03096 -1.3 -2.2 hypothetical protein compare
MPMX19_02981 -1.3 -5.2 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_00046 -1.3 -1.9 hypothetical protein compare
MPMX19_03798 -1.2 -2.4 hypothetical protein compare
MPMX19_06272 -1.2 -1.3 hypothetical protein compare
MPMX19_01053 -1.2 -2.9 Dihydroorotase compare
MPMX19_03859 -1.2 -2.4 hypothetical protein compare
MPMX19_02951 -1.2 -1.8 Deoxyribose-phosphate aldolase 1 compare
MPMX19_00576 -1.1 -2.6 hypothetical protein compare
MPMX19_01054 -1.1 -4.4 Aspartate carbamoyltransferase compare
MPMX19_00234 -1.1 -2.5 hypothetical protein compare
MPMX19_01630 -1.1 -3.3 Phosphoribosylamine--glycine ligase compare
MPMX19_03787 -1.0 -2.0 hypothetical protein compare
MPMX19_01884 -1.0 -2.4 Phosphoribosylformylglycinamidine synthase subunit PurQ compare
MPMX19_01883 -1.0 -4.9 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_06546 -1.0 -2.4 hypothetical protein compare
MPMX19_03085 -1.0 -1.6 Hydrogen peroxide-inducible genes activator compare
MPMX19_01499 -1.0 -3.4 hypothetical protein compare
MPMX19_03948 -1.0 -1.5 tRNA-Ser compare
MPMX19_06460 -1.0 -2.3 DNA-invertase hin compare
MPMX19_02207 -1.0 -1.9 N-(5'-phosphoribosyl)anthranilate isomerase compare
MPMX19_06887 -0.9 -2.0 Adenine deaminase compare
MPMX19_01395 -0.9 -1.4 hypothetical protein compare
MPMX19_04466 -0.9 -2.1 hypothetical protein compare
MPMX19_00148 -0.9 -1.5 hypothetical protein compare
MPMX19_02268 -0.9 -2.7 hypothetical protein compare
MPMX19_06456 -0.9 -1.3 hypothetical protein compare
MPMX19_04958 -0.9 -1.9 Methyl-accepting chemotaxis protein compare
MPMX19_01545 -0.9 -1.2 Lon protease compare
MPMX19_01400 -0.9 -2.0 hypothetical protein compare
MPMX19_04681 -0.9 -2.0 5-hydroxyisourate hydrolase compare
MPMX19_01860 -0.9 -2.6 hypothetical protein compare
MPMX19_02267 -0.9 -1.2 hypothetical protein compare
MPMX19_00976 -0.9 -1.7 ATP-dependent RNA helicase RhlE compare
MPMX19_01560 -0.9 -2.2 3'-5' exonuclease DinG compare
MPMX19_01777 -0.8 -2.0 2-aminoadipate transaminase compare
MPMX19_01330 -0.8 -2.4 3-mercaptopyruvate sulfurtransferase compare
MPMX19_00129 -0.8 -1.3 hypothetical protein compare
MPMX19_03652 -0.8 -3.2 Sorbitol dehydrogenase compare
MPMX19_03871 -0.8 -1.8 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_05438 -0.8 -2.2 hypothetical protein compare
MPMX19_06819 -0.8 -1.9 hypothetical protein compare
MPMX19_02657 -0.8 -7.2 Glutamate synthase [NADPH] large chain compare
MPMX19_02202 -0.8 -1.6 hypothetical protein compare
MPMX19_01998 -0.8 -3.6 3-isopropylmalate dehydratase large subunit compare
MPMX19_01304 -0.8 -5.4 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX19_04325 -0.8 -3.3 hypothetical protein compare
MPMX19_01042 -0.8 -2.9 hypothetical protein compare
MPMX19_04008 -0.8 -1.7 Beta-peptidyl aminopeptidase BapA compare
MPMX19_01113 -0.8 -1.7 Adaptive-response sensory-kinase SasA compare
MPMX19_03194 -0.8 -0.8 hypothetical protein compare
MPMX19_04954 -0.8 -2.1 Putative hydro-lyase compare
MPMX19_06236 -0.8 -2.3 hypothetical protein compare
MPMX19_06141 -0.8 -2.3 Intermembrane phospholipid transport system permease protein MlaE compare
MPMX19_00838 -0.8 -2.0 GTP pyrophosphokinase rsh compare
MPMX19_04081 -0.8 -1.4 hypothetical protein compare
MPMX19_06508 -0.8 -2.4 Nitrilotriacetate monooxygenase component A compare
MPMX19_02543 -0.8 -1.6 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX19_00268 -0.8 -1.8 Transcriptional regulatory protein OmpR compare
MPMX19_02862 -0.8 -2.8 hypothetical protein compare
MPMX19_04083 -0.8 -2.7 Cytochrome c-type protein SHP compare
MPMX19_00139 -0.8 -2.2 hypothetical protein compare
MPMX19_05656 -0.7 -1.5 HTH-type transcriptional activator RhaR compare
MPMX19_00126 -0.7 -1.8 hypothetical protein compare
MPMX19_01423 -0.7 -1.9 hypothetical protein compare
MPMX19_06197 -0.7 -0.8 hypothetical protein compare
MPMX19_05070 -0.7 -3.3 hypothetical protein compare
MPMX19_06399 -0.7 -1.5 hypothetical protein compare
MPMX19_06337 -0.7 -2.3 Arsenic resistance transcriptional regulator ArsR1 compare
MPMX19_00906 -0.7 -5.5 Amidophosphoribosyltransferase compare
MPMX19_02801 -0.7 -0.9 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_00061 -0.7 -1.9 L-lysine 2,3-aminomutase compare
MPMX19_03822 -0.7 -1.6 Sulfur carrier protein FdhD compare
MPMX19_02674 -0.7 -1.3 NADH:quinone reductase compare
MPMX19_00794 -0.7 -2.0 Transcriptional activator protein CopR compare
MPMX19_03342 -0.7 -1.6 hypothetical protein compare
MPMX19_04692 -0.7 -2.2 hypothetical protein compare
MPMX19_05119 -0.7 -5.2 Glucose-6-phosphate 1-dehydrogenase compare
MPMX19_03654 -0.7 -1.5 Fructokinase compare
MPMX19_03936 -0.7 -3.0 Acetyl-CoA acetyltransferase compare
MPMX19_00089 -0.7 -1.6 hypothetical protein compare
MPMX19_03165 -0.7 -1.9 hypothetical protein compare
MPMX19_02607 -0.7 -2.3 hypothetical protein compare
MPMX19_00236 -0.7 -1.8 HTH-type transcriptional regulator IscR compare
MPMX19_06723 -0.7 -2.2 hypothetical protein compare
MPMX19_06795 -0.7 -1.4 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase compare
MPMX19_05388 -0.7 -2.2 Leucine-responsive regulatory protein compare
MPMX19_02177 -0.7 -2.2 Succinylornithine transaminase/acetylornithine aminotransferase compare
MPMX19_06668 -0.7 -4.0 2-deoxystreptamine glucosyltransferase compare
MPMX19_04409 -0.7 -2.2 hypothetical protein compare
MPMX19_04495 -0.7 -2.5 hypothetical protein compare
MPMX19_06662 -0.7 -4.4 Ubiquinone biosynthesis O-methyltransferase, mitochondrial compare
MPMX19_03772 -0.6 -2.2 hypothetical protein compare
MPMX19_02658 -0.6 -4.8 Glutamate synthase [NADPH] small chain compare
MPMX19_06490 -0.6 -1.3 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_02675 -0.6 -5.1 Phosphoenolpyruvate-dependent phosphotransferase system compare
MPMX19_05445 -0.6 -1.8 tRNA-Glu compare
MPMX19_03195 -0.6 -0.9 hypothetical protein compare
MPMX19_01201 -0.6 -1.7 hypothetical protein compare
MPMX19_05727 -0.6 -3.3 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX19_01153 -0.6 -1.5 hypothetical protein compare
MPMX19_01748 -0.6 -1.5 hypothetical protein compare
MPMX19_02748 -0.6 -2.4 L-lactate dehydrogenase compare
MPMX19_02118 -0.6 -1.9 hypothetical protein compare
MPMX19_02664 -0.6 -1.0 Arabinose 5-phosphate isomerase KdsD compare
MPMX19_05346 -0.6 -2.0 hypothetical protein compare
MPMX19_04501 -0.6 -1.6 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_03063 -0.6 -1.7 hypothetical protein compare
MPMX19_05282 -0.6 -1.8 1,3,6,8-tetrahydroxynaphthalene synthase compare
MPMX19_04316 -0.6 -2.6 hypothetical protein compare
MPMX19_06743 -0.6 -1.6 Chemotaxis protein CheA compare
MPMX19_00714 -0.6 -3.3 Ferrous-iron efflux pump FieF compare
MPMX19_05605 -0.6 -1.8 hypothetical protein compare
MPMX19_06907 -0.6 -1.8 L-talarate/galactarate dehydratase compare
MPMX19_02962 -0.6 -2.3 hypothetical protein compare
MPMX19_03425 -0.6 -1.0 hypothetical protein compare
MPMX19_03768 -0.6 -1.5 hypothetical protein compare
MPMX19_03196 -0.6 -1.8 hypothetical protein compare
MPMX19_02850 -0.6 -1.0 Glyceraldehyde-3-phosphate dehydrogenase 1 compare
MPMX19_01247 -0.6 -0.9 Transcriptional regulatory protein DegU compare
MPMX19_04952 -0.6 -1.2 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_05719 -0.6 -1.4 hypothetical protein compare
MPMX19_00191 -0.6 -1.8 hypothetical protein compare
MPMX19_03295 -0.6 -1.3 HTH-type transcriptional regulator McbR compare
MPMX19_01084 -0.6 -2.1 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX19_00764 -0.6 -1.3 ECF RNA polymerase sigma factor EcfG compare
MPMX19_03499 -0.6 -1.5 Formate dehydrogenase, cytochrome b556(fdo) subunit compare
MPMX19_00145 -0.6 -2.9 DNA adenine methyltransferase YhdJ compare
MPMX19_00170 -0.6 -1.7 hypothetical protein compare
MPMX19_01376 -0.5 -1.4 hypothetical protein compare
MPMX19_01704 -0.5 -1.0 hypothetical protein compare
MPMX19_01627 -0.5 -2.2 hypothetical protein compare
MPMX19_03978 -0.5 -1.5 hypothetical protein compare
MPMX19_02677 -0.5 -2.3 hypothetical protein compare
MPMX19_03631 -0.5 -0.7 hypothetical protein compare
MPMX19_03775 -0.5 -2.5 hypothetical protein compare
MPMX19_03127 -0.5 -1.4 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase compare
MPMX19_02905 -0.5 -1.1 hypothetical protein compare
MPMX19_05901 -0.5 -1.5 Motility protein B compare
MPMX19_03872 -0.5 -2.7 hypothetical protein compare
MPMX19_03756 -0.5 -1.2 hypothetical protein compare
MPMX19_00663 -0.5 -1.8 hypothetical protein compare
MPMX19_06789 -0.5 -0.7 Octopine catabolism/uptake operon regulatory protein OccR compare
MPMX19_03491 -0.5 -1.0 putative FAD-linked oxidoreductase compare
MPMX19_05313 -0.5 -1.0 4,4'-diapolycopene aldehyde oxidase compare
MPMX19_06926 -0.5 -1.5 hypothetical protein compare
MPMX19_01541 -0.5 -1.7 hypothetical protein compare
MPMX19_04835 -0.5 -1.4 hypothetical protein compare
MPMX19_02803 -0.5 -1.5 putative FAD-linked oxidoreductase compare
MPMX19_05818 -0.5 -1.2 hypothetical protein compare
MPMX19_03765 -0.5 -2.0 hypothetical protein compare
MPMX19_02979 -0.5 -1.9 Hydrogen cyanide synthase subunit HcnB compare
MPMX19_05816 -0.5 -2.3 Thiol-disulfide oxidoreductase ResA compare
MPMX19_02116 -0.5 -1.2 Cold shock protein CspA compare
MPMX19_02860 -0.5 -1.3 hypothetical protein compare
MPMX19_04856 -0.5 -1.9 Phosphoglycolate phosphatase compare
MPMX19_04171 -0.5 -1.2 16S ribosomal RNA compare
MPMX19_04457 -0.5 -2.2 Pyruvate, phosphate dikinase compare
MPMX19_01864 -0.5 -0.7 Regulatory protein AtoC compare
MPMX19_02779 -0.5 -1.0 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_05511 -0.5 -1.3 hypothetical protein compare
MPMX19_02378 -0.5 -1.3 hypothetical protein compare
MPMX19_02553 -0.5 -2.3 Protein-export protein SecB compare
MPMX19_03128 -0.5 -1.6 hypothetical protein compare
MPMX19_01586 -0.5 -1.6 hypothetical protein compare
MPMX19_00766 -0.5 -1.2 hypothetical protein compare
MPMX19_03262 -0.5 -1.2 putative HTH-type transcriptional repressor ExuR compare
MPMX19_03784 -0.5 -1.2 hypothetical protein compare
MPMX19_06271 -0.5 -3.6 hypothetical protein compare
MPMX19_06654 -0.5 -3.5 Putative asparagine synthetase [glutamine-hydrolyzing] compare
MPMX19_06934 -0.5 -1.1 Manganese transport system membrane protein MntB compare
MPMX19_06004 -0.5 -1.2 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_04462 -0.5 -1.8 Thiamine-phosphate synthase compare
MPMX19_00329 -0.5 -1.7 Putative membrane protein insertion efficiency factor compare
MPMX19_04121 -0.5 -2.3 Putative aminopeptidase YsdC compare
MPMX19_06253 -0.5 -0.7 hypothetical protein compare
MPMX19_06090 -0.5 -1.0 Pyruvate dehydrogenase complex repressor compare
MPMX19_06417 -0.5 -2.0 Transcriptional regulatory protein OmpR compare
MPMX19_01014 -0.5 -2.0 Indole-3-glycerol phosphate synthase compare
MPMX19_05809 -0.5 -1.9 NAD-dependent dihydropyrimidine dehydrogenase subunit PreT compare
MPMX19_02303 -0.5 -1.2 hypothetical protein compare
MPMX19_01918 -0.5 -0.8 tRNA-Ala compare
MPMX19_06736 -0.5 -1.9 hypothetical protein compare
MPMX19_04348 -0.5 -2.8 hypothetical protein compare
MPMX19_02980 -0.5 -1.0 Hydrogen cyanide synthase subunit HcnA compare
MPMX19_03389 -0.5 -1.5 Carbon monoxide dehydrogenase small chain compare
MPMX19_02809 -0.5 -1.5 D-erythronate kinase compare
MPMX19_03276 -0.5 -1.4 hypothetical protein compare
MPMX19_02004 -0.5 -3.0 hypothetical protein compare
MPMX19_05013 -0.5 -1.9 Cytochrome b compare
MPMX19_02646 -0.5 -1.3 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm; high oxygen experiments