Experiment set1S62 for Azospirillum sp. SherDot2

Compare to:

NL-CCM; high oxygen

200 most detrimental genes:

  gene name fitness t score description  
MPMX19_00864 +1.2 5.1 Flagellar hook-basal body complex protein FliE compare
MPMX19_01059 +1.2 1.8 hypothetical protein compare
MPMX19_04000 +1.1 4.9 Flagellar motor switch protein FliG compare
MPMX19_01493 +1.1 2.9 Flagellar assembly protein FliX compare
MPMX19_01479 +1.1 6.6 hypothetical protein compare
MPMX19_05690 +1.0 7.6 Protein phosphotransferase ChpT compare
MPMX19_00866 +1.0 6.7 Flagellar biosynthetic protein FliR compare
MPMX19_01480 +1.0 6.0 hypothetical protein compare
MPMX19_06581 +1.0 7.2 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 2 compare
MPMX19_04094 +1.0 7.4 Flagellar M-ring protein compare
MPMX19_00863 +1.0 7.1 Flagellar basal-body rod protein FlgC compare
MPMX19_06577 +1.0 7.6 hypothetical protein compare
MPMX19_01349 +1.0 6.9 hypothetical protein compare
MPMX19_01481 +0.9 7.9 Flagellar motor switch protein FliM compare
MPMX19_03095 +0.9 3.3 hypothetical protein compare
MPMX19_01494 +0.9 6.1 Flagellar P-ring protein compare
MPMX19_01484 +0.9 6.4 Flagellar basal-body rod protein FlgG compare
MPMX19_06545 +0.9 8.4 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase compare
MPMX19_01483 +0.9 7.4 Flagellar basal-body rod protein FlgG compare
MPMX19_04092 +0.9 5.6 Flagellar motor switch protein FliN compare
MPMX19_00862 +0.9 6.7 hypothetical protein compare
MPMX19_06544 +0.9 7.8 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) compare
MPMX19_00858 +0.9 4.3 Flagellar biosynthetic protein FliP compare
MPMX19_05921 +0.9 2.7 hypothetical protein compare
MPMX19_02460 +0.9 8.2 Motility protein A compare
MPMX19_00472 +0.9 2.5 Protein HesB, heterocyst compare
MPMX19_02218 +0.9 2.4 hypothetical protein compare
MPMX19_00212 +0.9 7.5 Nitrogen fixation regulation protein FixK compare
MPMX19_04087 +0.9 3.5 Flagellum site-determining protein YlxH compare
MPMX19_01482 +0.9 7.1 hypothetical protein compare
MPMX19_06510 +0.9 3.0 Aliphatic sulfonates import ATP-binding protein SsuB compare
MPMX19_04204 +0.8 6.3 D-alanine--D-alanyl carrier protein ligase compare
MPMX19_05622 +0.8 6.8 Sensor histidine kinase RegB compare
MPMX19_04222 +0.8 7.2 hypothetical protein compare
MPMX19_06547 +0.8 4.1 hypothetical protein compare
MPMX19_04198 +0.8 7.0 hypothetical protein compare
MPMX19_04199 +0.8 5.3 Pseudaminic acid synthase compare
MPMX19_03757 +0.8 2.7 D-ribose pyranase compare
MPMX19_04205 +0.8 2.1 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_04200 +0.8 5.1 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase compare
MPMX19_04258 +0.8 3.9 hypothetical protein compare
MPMX19_01485 +0.8 6.3 hypothetical protein compare
MPMX19_06235 +0.8 2.5 Glycine cleavage system transcriptional activator compare
MPMX19_00854 +0.8 7.0 hypothetical protein compare
MPMX19_04088 +0.8 3.2 Signal recognition particle 54 kDa protein compare
MPMX19_03157 +0.8 2.1 hypothetical protein compare
MPMX19_01811 +0.8 1.9 hypothetical protein compare
MPMX19_04225 +0.8 4.1 hypothetical protein compare
MPMX19_05586 +0.7 1.5 hypothetical protein compare
MPMX19_04224 +0.7 7.0 hypothetical protein compare
MPMX19_06580 +0.7 3.7 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_00867 +0.7 6.5 Flagellar biosynthetic protein FlhB compare
MPMX19_04161 +0.7 2.5 hypothetical protein compare
MPMX19_04208 +0.7 2.7 flagellum biosynthesis repressor protein FlbT compare
MPMX19_04223 +0.7 6.3 hypothetical protein compare
MPMX19_05623 +0.7 3.6 Photosynthetic apparatus regulatory protein RegA compare
MPMX19_03816 +0.7 2.3 hypothetical protein compare
MPMX19_05203 +0.7 2.4 hypothetical protein compare
MPMX19_03699 +0.7 2.6 Maltose/maltodextrin import ATP-binding protein MalK compare
MPMX19_04093 +0.7 2.9 hypothetical protein compare
MPMX19_04726 +0.7 2.4 Glycine betaine/choline transport system permease protein OusW compare
MPMX19_06520 +0.7 2.3 Nitrate import ATP-binding protein NrtC compare
MPMX19_05685 +0.7 5.1 Protein-glutamate methylesterase/protein-glutamine glutaminase 2 compare
MPMX19_01496 +0.7 4.8 hypothetical protein compare
MPMX19_00311 +0.7 6.3 hypothetical protein compare
MPMX19_05714 +0.7 5.0 hypothetical protein compare
MPMX19_04579 +0.7 2.9 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX19_04090 +0.7 4.7 Anaerobic nitric oxide reductase transcription regulator NorR compare
MPMX19_03900 +0.7 2.8 Hca operon transcriptional activator HcaR compare
MPMX19_06886 +0.7 3.6 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_06582 +0.7 5.7 hypothetical protein compare
MPMX19_01486 +0.7 4.7 Flagellar L-ring protein compare
MPMX19_00608 +0.7 1.1 hypothetical protein compare
MPMX19_01067 +0.7 1.8 hypothetical protein compare
MPMX19_00853 +0.7 4.8 hypothetical protein compare
MPMX19_03450 +0.7 1.3 hypothetical protein compare
MPMX19_04212 +0.6 5.6 Photosystem I assembly protein Ycf3 compare
MPMX19_04985 +0.6 1.4 HTH-type transcriptional regulator DmlR compare
MPMX19_00860 +0.6 2.4 hypothetical protein compare
MPMX19_05043 +0.6 3.5 hypothetical protein compare
MPMX19_04863 +0.6 1.4 Transcriptional regulatory protein LnrK compare
MPMX19_00852 +0.6 1.7 hypothetical protein compare
MPMX19_05678 +0.6 3.9 hypothetical protein compare
MPMX19_04207 +0.6 2.4 hypothetical protein compare
MPMX19_01875 +0.6 2.7 hypothetical protein compare
MPMX19_01947 +0.6 1.7 Chemotaxis protein CheY compare
MPMX19_06492 +0.6 2.3 IS5 family transposase ISAzs10 compare
MPMX19_05679 +0.6 4.7 Flagellum-specific ATP synthase compare
MPMX19_00543 +0.6 2.3 Molybdenum cofactor guanylyltransferase compare
MPMX19_01012 +0.6 2.1 Cyclic pyranopterin monophosphate synthase compare
MPMX19_04699 +0.6 2.5 hypothetical protein compare
MPMX19_04089 +0.6 5.1 Flagellar biosynthesis protein FlhA compare
MPMX19_03800 +0.6 1.5 hypothetical protein compare
MPMX19_05011 +0.6 2.9 tRNA (cytidine(34)-2'-O)-methyltransferase compare
MPMX19_00318 +0.6 3.6 hypothetical protein compare
MPMX19_00362 +0.6 2.2 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_02532 +0.6 1.8 Cytochrome c-type biogenesis protein CcmE compare
MPMX19_05229 +0.6 3.2 ECF RNA polymerase sigma factor RpoE compare
MPMX19_04913 +0.6 1.4 hypothetical protein compare
MPMX19_05834 +0.6 1.8 Hydrogen peroxide-inducible genes activator compare
MPMX19_01497 +0.6 2.5 hypothetical protein compare
MPMX19_05324 +0.6 4.1 hypothetical protein compare
MPMX19_05575 +0.6 2.2 hypothetical protein compare
MPMX19_03141 +0.6 1.6 hypothetical protein compare
MPMX19_00868 +0.6 5.3 Sensor kinase CckA compare
MPMX19_06404 +0.6 2.3 hypothetical protein compare
MPMX19_01159 +0.6 4.9 Presqualene diphosphate synthase compare
MPMX19_04687 +0.6 1.6 Atrazine chlorohydrolase compare
MPMX19_04975 +0.6 1.8 hypothetical protein compare
MPMX19_00142 +0.5 1.1 hypothetical protein compare
MPMX19_03123 +0.5 1.3 Citrate lyase acyl carrier protein compare
MPMX19_06509 +0.5 2.1 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_06180 +0.5 1.5 Sensor histidine kinase RegB compare
MPMX19_02811 +0.5 2.4 Long-chain-alcohol dehydrogenase 1 compare
MPMX19_06202 +0.5 1.1 hypothetical protein compare
MPMX19_04727 +0.5 2.5 hypothetical protein compare
MPMX19_02668 +0.5 3.8 RNA polymerase sigma-54 factor 2 compare
MPMX19_04202 +0.5 1.9 Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system compare
MPMX19_00708 +0.5 4.2 hypothetical protein compare
MPMX19_00788 +0.5 2.4 Chemotaxis protein CheY compare
MPMX19_04209 +0.5 4.4 Lipopolysaccharide assembly protein B compare
MPMX19_03694 +0.5 1.3 hypothetical protein compare
MPMX19_02746 +0.5 3.7 Peptidyl-lysine N-acetyltransferase Pat compare
MPMX19_03375 +0.5 2.6 Outer membrane protein TolC compare
MPMX19_01755 +0.5 2.4 hypothetical protein compare
MPMX19_02426 +0.5 3.5 hypothetical protein compare
MPMX19_02502 +0.5 2.4 hypothetical protein compare
MPMX19_04700 +0.5 2.2 Adaptive-response sensory-kinase SasA compare
MPMX19_04737 +0.5 1.6 Methenyltetrahydromethanopterin cyclohydrolase compare
MPMX19_01401 +0.5 1.4 Ubiquinone biosynthesis accessory factor UbiK compare
MPMX19_00429 +0.5 2.0 hypothetical protein compare
MPMX19_00790 +0.5 1.1 hypothetical protein compare
MPMX19_00861 +0.5 3.8 hypothetical protein compare
MPMX19_03890 +0.5 1.8 Riboflavin transport system permease protein RibX compare
MPMX19_03976 +0.5 2.7 hypothetical protein compare
MPMX19_06193 +0.5 1.1 Flagellar hook-basal body complex protein FliE compare
MPMX19_00851 +0.5 3.5 hypothetical protein compare
MPMX19_05430 +0.5 1.8 HTH-type transcriptional regulator DmlR compare
MPMX19_02815 +0.5 1.2 2-keto-4-pentenoate hydratase compare
MPMX19_03972 +0.5 1.8 Enolase compare
MPMX19_06644 +0.5 4.6 GDP-mannose 4,6-dehydratase compare
MPMX19_00186 +0.5 1.5 hypothetical protein compare
MPMX19_06648 +0.5 2.3 hypothetical protein compare
MPMX19_05362 +0.5 1.3 hypothetical protein compare
MPMX19_01719 +0.5 1.0 Putative fluoride ion transporter CrcB compare
MPMX19_06888 +0.5 2.0 hypothetical protein compare
MPMX19_04492 +0.5 1.8 hypothetical protein compare
MPMX19_06872 +0.5 2.5 Short-chain-enoyl-CoA hydratase compare
MPMX19_06281 +0.5 1.8 hypothetical protein compare
MPMX19_02266 +0.5 1.8 hypothetical protein compare
MPMX19_00010 +0.5 2.2 Transcriptional regulatory protein OmpR compare
MPMX19_00725 +0.5 2.8 Transcriptional regulatory protein ros compare
MPMX19_03494 +0.5 2.3 Regulatory protein AtoC compare
MPMX19_04693 +0.5 2.2 hypothetical protein compare
MPMX19_06734 +0.5 4.4 Alginate biosynthesis protein AlgA compare
MPMX19_05139 +0.5 1.6 CRISPR-associated endoribonuclease Cas2 compare
MPMX19_03083 +0.5 1.5 hypothetical protein compare
MPMX19_05618 +0.5 1.5 putative manganese efflux pump MntP compare
MPMX19_02136 +0.5 0.7 Phage shock protein A compare
MPMX19_05104 +0.5 0.9 hypothetical protein compare
MPMX19_03552 +0.5 1.3 hypothetical protein compare
MPMX19_02714 +0.5 1.6 hypothetical protein compare
MPMX19_03874 +0.5 1.9 hypothetical protein compare
MPMX19_03612 +0.5 2.2 hypothetical protein compare
MPMX19_06975 +0.5 1.9 HTH-type transcriptional regulator HdfR compare
MPMX19_00152 +0.5 1.1 hypothetical protein compare
MPMX19_04755 +0.5 2.4 Ureidoglycolate lyase compare
MPMX19_00167 +0.5 1.3 hypothetical protein compare
MPMX19_00208 +0.5 1.3 hypothetical protein compare
MPMX19_04680 +0.5 1.3 Inner membrane ABC transporter permease protein YdcV compare
MPMX19_04694 +0.5 1.6 Na(+)/H(+) antiporter subunit E1 compare
MPMX19_03114 +0.5 1.5 hypothetical protein compare
MPMX19_06199 +0.5 1.7 GTPase HflX compare
MPMX19_01766 +0.4 2.5 Phosphate-specific transport system accessory protein PhoU compare
MPMX19_05621 +0.4 2.6 ABC transporter ATP-binding protein NatA compare
MPMX19_05581 +0.4 1.1 hypothetical protein compare
MPMX19_06578 +0.4 3.2 hypothetical protein compare
MPMX19_06928 +0.4 0.9 hypothetical protein compare
MPMX19_03308 +0.4 1.9 hypothetical protein compare
MPMX19_06979 +0.4 1.2 hypothetical protein compare
MPMX19_04948 +0.4 1.2 HTH-type transcriptional regulator GltR compare
MPMX19_02039 +0.4 1.8 hypothetical protein compare
MPMX19_03575 +0.4 1.5 HTH-type transcriptional regulator NimR compare
MPMX19_03000 +0.4 1.7 Galactitol 2-dehydrogenase compare
MPMX19_04362 +0.4 0.9 Cytidine deaminase compare
MPMX19_02633 +0.4 2.7 Chaperone protein DnaJ compare
MPMX19_06853 +0.4 1.8 Glyoxylate/hydroxypyruvate reductase A compare
MPMX19_06506 +0.4 1.2 hypothetical protein compare
MPMX19_01620 +0.4 2.3 hypothetical protein compare
MPMX19_03097 +0.4 2.5 hypothetical protein compare
MPMX19_05220 +0.4 1.1 hypothetical protein compare
MPMX19_03327 +0.4 2.4 hypothetical protein compare
MPMX19_05295 +0.4 1.1 hypothetical protein compare
MPMX19_05205 +0.4 1.5 hypothetical protein compare
MPMX19_00335 +0.4 0.8 Magnesium transport protein CorA compare
MPMX19_02379 +0.4 2.3 hypothetical protein compare
MPMX19_02618 +0.4 1.1 Transcriptional regulatory protein BaeR compare
MPMX19_04145 +0.4 1.0 hypothetical protein compare
MPMX19_01491 +0.4 1.2 hypothetical protein compare
MPMX19_04620 +0.4 1.8 HTH-type transcriptional regulator CynR compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm; high oxygen experiments