Experiment set1S61 for Azospirillum sp. SherDot2

Compare to:

NL-CCM; high oxygen

200 most important genes:

  gene name fitness t score description  
MPMX19_01053 -2.1 -4.5 Dihydroorotase compare
MPMX19_00530 -2.1 -4.1 Orotate phosphoribosyltransferase compare
MPMX19_03891 -2.0 -3.9 Aliphatic sulfonates import ATP-binding protein SsuB compare
MPMX19_03141 -1.6 -2.2 hypothetical protein compare
MPMX19_04145 -1.5 -2.5 hypothetical protein compare
MPMX19_05144 -1.5 -2.4 hypothetical protein compare
MPMX19_03906 -1.5 -10.5 Pca regulon regulatory protein compare
MPMX19_01565 -1.4 -2.1 hypothetical protein compare
MPMX19_01394 -1.4 -1.7 hypothetical protein compare
MPMX19_05725 -1.3 -1.7 hypothetical protein compare
MPMX19_05824 -1.3 -3.5 hypothetical protein compare
MPMX19_00689 -1.3 -2.4 Glyceraldehyde-3-phosphate dehydrogenase 1 compare
MPMX19_00304 -1.2 -2.7 Phosphatidylcholine synthase compare
MPMX19_00182 -1.2 -2.0 hypothetical protein compare
MPMX19_02267 -1.2 -1.5 hypothetical protein compare
MPMX19_06904 -1.2 -2.4 putative tautomerase compare
MPMX19_01560 -1.2 -2.3 3'-5' exonuclease DinG compare
MPMX19_01113 -1.1 -2.2 Adaptive-response sensory-kinase SasA compare
MPMX19_03734 -1.1 -1.9 RutC family protein YjgH compare
MPMX19_00503 -1.1 -3.5 ATP-dependent Clp protease ATP-binding subunit ClpA compare
MPMX19_02980 -1.1 -1.9 Hydrogen cyanide synthase subunit HcnA compare
MPMX19_01054 -1.1 -4.1 Aspartate carbamoyltransferase compare
MPMX19_03609 -1.1 -2.4 HTH-type transcriptional repressor NagR compare
MPMX19_00680 -1.1 -2.0 Elongation factor P--(R)-beta-lysine ligase compare
MPMX19_05104 -1.1 -2.1 hypothetical protein compare
MPMX19_00128 -1.1 -7.2 hypothetical protein compare
MPMX19_03822 -1.1 -1.8 Sulfur carrier protein FdhD compare
MPMX19_06800 -1.1 -2.8 Homoprotocatechuate catabolism bifunctional isomerase/decarboxylase compare
MPMX19_01499 -1.1 -3.3 hypothetical protein compare
MPMX19_05818 -1.0 -1.4 hypothetical protein compare
MPMX19_04958 -1.0 -1.5 Methyl-accepting chemotaxis protein compare
MPMX19_04149 -1.0 -2.3 hypothetical protein compare
MPMX19_00240 -1.0 -2.1 hypothetical protein compare
MPMX19_01084 -1.0 -3.4 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX19_06723 -1.0 -3.0 hypothetical protein compare
MPMX19_00020 -1.0 -1.6 hypothetical protein compare
MPMX19_03724 -1.0 -1.7 hypothetical protein compare
MPMX19_01918 -1.0 -1.3 tRNA-Ala compare
MPMX19_05358 -1.0 -1.0 hypothetical protein compare
MPMX19_00319 -0.9 -1.3 hypothetical protein compare
MPMX19_04638 -0.9 -1.8 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_04898 -0.9 -2.3 Transcriptional regulatory protein LnrK compare
MPMX19_00126 -0.9 -1.9 hypothetical protein compare
MPMX19_04081 -0.9 -1.8 hypothetical protein compare
MPMX19_06677 -0.9 -1.9 hypothetical protein compare
MPMX19_01304 -0.9 -5.5 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX19_00576 -0.9 -1.9 hypothetical protein compare
MPMX19_02055 -0.9 -2.5 Hypoxic response protein 1 compare
MPMX19_03654 -0.9 -1.7 Fructokinase compare
MPMX19_05448 -0.9 -2.4 DNA-invertase hin compare
MPMX19_05458 -0.9 -2.6 hypothetical protein compare
MPMX19_02538 -0.9 -1.6 hypothetical protein compare
MPMX19_03281 -0.9 -2.2 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_00846 -0.9 -1.8 hypothetical protein compare
MPMX19_00976 -0.9 -1.7 ATP-dependent RNA helicase RhlE compare
MPMX19_02202 -0.9 -1.8 hypothetical protein compare
MPMX19_00904 -0.8 -4.7 DNA repair protein RadA compare
MPMX19_01777 -0.8 -1.8 2-aminoadipate transaminase compare
MPMX19_04466 -0.8 -2.5 hypothetical protein compare
MPMX19_06789 -0.8 -1.9 Octopine catabolism/uptake operon regulatory protein OccR compare
MPMX19_05261 -0.8 -2.8 Multidrug resistance protein MdtE compare
MPMX19_00766 -0.8 -1.8 hypothetical protein compare
MPMX19_02136 -0.8 -1.0 Phage shock protein A compare
MPMX19_05809 -0.8 -3.0 NAD-dependent dihydropyrimidine dehydrogenase subunit PreT compare
MPMX19_04835 -0.8 -1.9 hypothetical protein compare
MPMX19_00887 -0.8 -1.5 hypothetical protein compare
MPMX19_01545 -0.8 -1.0 Lon protease compare
MPMX19_03193 -0.8 -3.1 hypothetical protein compare
MPMX19_03787 -0.8 -1.5 hypothetical protein compare
MPMX19_01714 -0.8 -1.2 tRNA-modifying protein YgfZ compare
MPMX19_03295 -0.8 -1.8 HTH-type transcriptional regulator McbR compare
MPMX19_06001 -0.8 -2.9 hypothetical protein compare
MPMX19_02516 -0.8 -2.8 hypothetical protein compare
MPMX19_03421 -0.7 -1.8 hypothetical protein compare
MPMX19_02580 -0.7 -1.7 Acetyltransferase compare
MPMX19_00089 -0.7 -1.8 hypothetical protein compare
MPMX19_00008 -0.7 -1.9 hypothetical protein compare
MPMX19_02397 -0.7 -2.1 hypothetical protein compare
MPMX19_03425 -0.7 -1.4 hypothetical protein compare
MPMX19_02268 -0.7 -2.2 hypothetical protein compare
MPMX19_04602 -0.7 -2.9 IS21 family transposase ISMex39 compare
MPMX19_01883 -0.7 -3.3 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_00475 -0.7 -1.4 hypothetical protein compare
MPMX19_05152 -0.7 -1.7 Phosphonoacetaldehyde hydrolase compare
MPMX19_00046 -0.7 -1.2 hypothetical protein compare
MPMX19_06123 -0.7 -1.4 hypothetical protein compare
MPMX19_03064 -0.7 -2.5 Cytochrome c-type protein NapC compare
MPMX19_06199 -0.7 -2.2 GTPase HflX compare
MPMX19_01201 -0.7 -1.8 hypothetical protein compare
MPMX19_03320 -0.7 -1.8 hypothetical protein compare
MPMX19_02115 -0.7 -2.2 hypothetical protein compare
MPMX19_03335 -0.7 -1.4 hypothetical protein compare
MPMX19_06967 -0.7 -1.3 hypothetical protein compare
MPMX19_03194 -0.7 -1.5 hypothetical protein compare
MPMX19_01243 -0.7 -1.0 hypothetical protein compare
MPMX19_02320 -0.7 -1.2 HTH-type transcriptional regulator GltR compare
MPMX19_00906 -0.7 -4.9 Amidophosphoribosyltransferase compare
MPMX19_04948 -0.7 -1.3 HTH-type transcriptional regulator GltR compare
MPMX19_00714 -0.7 -3.6 Ferrous-iron efflux pump FieF compare
MPMX19_06422 -0.7 -2.1 hypothetical protein compare
MPMX19_01585 -0.7 -1.7 Zinc uptake regulation protein compare
MPMX19_06880 -0.7 -1.1 Validamycin A dioxygenase compare
MPMX19_01884 -0.7 -1.8 Phosphoribosylformylglycinamidine synthase subunit PurQ compare
MPMX19_06777 -0.7 -1.6 hypothetical protein compare
MPMX19_04864 -0.7 -1.6 hypothetical protein compare
MPMX19_00695 -0.7 -1.8 putative transcriptional regulatory protein compare
MPMX19_04210 -0.7 -1.2 hypothetical protein compare
MPMX19_02981 -0.7 -2.8 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_04940 -0.7 -3.9 Histidine ammonia-lyase compare
MPMX19_03042 -0.7 -2.3 hypothetical protein compare
MPMX19_06969 -0.7 -1.4 hypothetical protein compare
MPMX19_05459 -0.7 -1.3 hypothetical protein compare
MPMX19_05428 -0.7 -2.2 PCP degradation transcriptional activation protein compare
MPMX19_04083 -0.7 -2.2 Cytochrome c-type protein SHP compare
MPMX19_02502 -0.7 -2.3 hypothetical protein compare
MPMX19_03756 -0.7 -1.3 hypothetical protein compare
MPMX19_03907 -0.7 -2.4 Short-chain-enoyl-CoA hydratase compare
MPMX19_01912 -0.7 -1.9 Acetyl-CoA acetyltransferase compare
MPMX19_06821 -0.7 -1.8 (E)-2-((N-methylformamido)methylene)succinate hydrolase compare
MPMX19_02207 -0.7 -1.7 N-(5'-phosphoribosyl)anthranilate isomerase compare
MPMX19_04104 -0.6 -3.5 hypothetical protein compare
MPMX19_05586 -0.6 -0.9 hypothetical protein compare
MPMX19_04937 -0.6 -1.8 Mannosyl-D-glycerate transport/metabolism system repressor MngR compare
MPMX19_05987 -0.6 -2.2 Inner membrane protein YqaA compare
MPMX19_03035 -0.6 -2.0 Protein YceI compare
MPMX19_04273 -0.6 -2.4 NADH:quinone reductase compare
MPMX19_00608 -0.6 -0.7 hypothetical protein compare
MPMX19_05726 -0.6 -1.2 hypothetical protein compare
MPMX19_00696 -0.6 -2.7 Crossover junction endodeoxyribonuclease RuvC compare
MPMX19_04241 -0.6 -2.3 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_03165 -0.6 -1.6 hypothetical protein compare
MPMX19_00234 -0.6 -1.4 hypothetical protein compare
MPMX19_06834 -0.6 -2.7 Vitamin B6 salvage pathway transcriptional repressor PtsJ compare
MPMX19_02679 -0.6 -1.4 hypothetical protein compare
MPMX19_01748 -0.6 -1.3 hypothetical protein compare
MPMX19_02657 -0.6 -5.3 Glutamate synthase [NADPH] large chain compare
MPMX19_01014 -0.6 -2.1 Indole-3-glycerol phosphate synthase compare
MPMX19_06788 -0.6 -1.3 putative protein YiaX1 compare
MPMX19_03747 -0.6 -2.3 Potassium-transporting ATPase KdpC subunit compare
MPMX19_06053 -0.6 -3.1 hypothetical protein compare
MPMX19_05554 -0.6 -1.8 hypothetical protein compare
MPMX19_02334 -0.6 -2.3 hypothetical protein compare
MPMX19_06819 -0.6 -1.4 hypothetical protein compare
MPMX19_06662 -0.6 -4.0 Ubiquinone biosynthesis O-methyltransferase, mitochondrial compare
MPMX19_03788 -0.6 -2.4 hypothetical protein compare
MPMX19_05034 -0.6 -1.6 ATP synthase subunit c compare
MPMX19_01277 -0.6 -3.2 hypothetical protein compare
MPMX19_00795 -0.6 -2.5 Adaptive-response sensory-kinase SasA compare
MPMX19_04893 -0.6 -2.1 hypothetical protein compare
MPMX19_00986 -0.6 -3.2 Ribonuclease D compare
MPMX19_04457 -0.6 -2.2 Pyruvate, phosphate dikinase compare
MPMX19_04996 -0.6 -1.5 hypothetical protein compare
MPMX19_03116 -0.6 -1.3 Vitamin B12 import ATP-binding protein BtuD compare
MPMX19_03558 -0.6 -1.6 hypothetical protein compare
MPMX19_04214 -0.6 -2.3 hypothetical protein compare
MPMX19_00139 -0.6 -2.0 hypothetical protein compare
MPMX19_03342 -0.6 -1.2 hypothetical protein compare
MPMX19_02567 -0.6 -3.1 hypothetical protein compare
MPMX19_00262 -0.6 -0.8 Thiazole synthase compare
MPMX19_03574 -0.6 -2.2 Aurachin B dehydrogenase compare
MPMX19_03635 -0.6 -0.9 DNA-binding transcriptional activator DecR compare
MPMX19_02787 -0.6 -1.5 (R)-benzylsuccinyl-CoA dehydrogenase compare
MPMX19_06417 -0.6 -2.3 Transcriptional regulatory protein OmpR compare
MPMX19_05095 -0.6 -1.6 Toxin YoeB compare
MPMX19_02089 -0.6 -1.8 hypothetical protein compare
MPMX19_00129 -0.6 -0.9 hypothetical protein compare
MPMX19_06817 -0.6 -1.9 Glycine betaine/choline transport system permease protein OusW compare
MPMX19_04951 -0.6 -3.4 hypothetical protein compare
MPMX19_03693 -0.6 -1.6 hypothetical protein compare
MPMX19_01998 -0.6 -2.4 3-isopropylmalate dehydratase large subunit compare
MPMX19_02511 -0.6 -0.8 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase compare
MPMX19_03652 -0.5 -2.2 Sorbitol dehydrogenase compare
MPMX19_00152 -0.5 -0.9 hypothetical protein compare
MPMX19_01487 -0.5 -1.6 hypothetical protein compare
MPMX19_04738 -0.5 -1.4 hypothetical protein compare
MPMX19_03634 -0.5 -1.5 Arginase compare
MPMX19_05454 -0.5 -1.2 hypothetical protein compare
MPMX19_02011 -0.5 -1.6 RNA helicase CrhR compare
MPMX19_05872 -0.5 -1.0 Redox-sensitive transcriptional activator SoxR compare
MPMX19_01297 -0.5 -1.1 hypothetical protein compare
MPMX19_06668 -0.5 -3.1 2-deoxystreptamine glucosyltransferase compare
MPMX19_05070 -0.5 -2.5 hypothetical protein compare
MPMX19_03367 -0.5 -1.6 Magnetosome membrane protein 22 compare
MPMX19_00996 -0.5 -2.1 Metalloprotease MmpA compare
MPMX19_05915 -0.5 -1.4 Flagellar M-ring protein compare
MPMX19_05119 -0.5 -4.0 Glucose-6-phosphate 1-dehydrogenase compare
MPMX19_02674 -0.5 -1.0 NADH:quinone reductase compare
MPMX19_01718 -0.5 -1.1 Ribosomal large subunit pseudouridine synthase C compare
MPMX19_00122 -0.5 -1.6 hypothetical protein compare
MPMX19_02300 -0.5 -1.4 Transcription elongation factor GreA compare
MPMX19_06437 -0.5 -1.2 DNA-invertase hin compare
MPMX19_02772 -0.5 -1.4 N-acetylcysteine deacetylase compare
MPMX19_00134 -0.5 -1.5 hypothetical protein compare
MPMX19_06808 -0.5 -0.9 HTH-type transcriptional regulator DmlR compare
MPMX19_05746 -0.5 -2.3 hypothetical protein compare
MPMX19_02840 -0.5 -2.8 hypothetical protein compare
MPMX19_05100 -0.5 -1.6 hypothetical protein compare
MPMX19_02613 -0.5 -1.2 hypothetical protein compare
MPMX19_00609 -0.5 -1.7 Chemotaxis protein CheY compare
MPMX19_00849 -0.5 -1.3 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm; high oxygen experiments