Experiment set1S61 for Azospirillum sp. SherDot2

Compare to:

NL-CCM; high oxygen

200 most detrimental genes:

  gene name fitness t score description  
MPMX19_01480 +1.7 9.9 hypothetical protein compare
MPMX19_05690 +1.7 13.7 Protein phosphotransferase ChpT compare
MPMX19_01479 +1.7 10.2 hypothetical protein compare
MPMX19_02460 +1.6 15.0 Motility protein A compare
MPMX19_01349 +1.6 12.1 hypothetical protein compare
MPMX19_01482 +1.5 12.4 hypothetical protein compare
MPMX19_01484 +1.5 10.8 Flagellar basal-body rod protein FlgG compare
MPMX19_04198 +1.4 12.5 hypothetical protein compare
MPMX19_05685 +1.4 11.0 Protein-glutamate methylesterase/protein-glutamine glutaminase 2 compare
MPMX19_04000 +1.4 6.1 Flagellar motor switch protein FliG compare
MPMX19_06545 +1.3 12.4 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase compare
MPMX19_04088 +1.3 5.9 Signal recognition particle 54 kDa protein compare
MPMX19_04093 +1.3 6.7 hypothetical protein compare
MPMX19_06577 +1.3 10.6 hypothetical protein compare
MPMX19_03976 +1.3 6.7 hypothetical protein compare
MPMX19_04258 +1.3 7.2 hypothetical protein compare
MPMX19_06581 +1.3 10.2 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 2 compare
MPMX19_01493 +1.3 4.2 Flagellar assembly protein FliX compare
MPMX19_04094 +1.3 9.6 Flagellar M-ring protein compare
MPMX19_06544 +1.3 11.2 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) compare
MPMX19_01481 +1.3 10.6 Flagellar motor switch protein FliM compare
MPMX19_01483 +1.3 10.3 Flagellar basal-body rod protein FlgG compare
MPMX19_00864 +1.2 6.3 Flagellar hook-basal body complex protein FliE compare
MPMX19_01485 +1.2 10.3 hypothetical protein compare
MPMX19_04199 +1.2 9.9 Pseudaminic acid synthase compare
MPMX19_01494 +1.2 8.9 Flagellar P-ring protein compare
MPMX19_04225 +1.2 6.8 hypothetical protein compare
MPMX19_00868 +1.2 11.4 Sensor kinase CckA compare
MPMX19_03072 +1.2 2.4 hypothetical protein compare
MPMX19_05687 +1.2 7.1 Chemotaxis protein CheW compare
MPMX19_04206 +1.2 6.0 3-oxoacyl-[acyl-carrier-protein] synthase 3 compare
MPMX19_04090 +1.2 9.2 Anaerobic nitric oxide reductase transcription regulator NorR compare
MPMX19_04205 +1.2 5.5 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_05679 +1.2 9.0 Flagellum-specific ATP synthase compare
MPMX19_04207 +1.1 5.4 hypothetical protein compare
MPMX19_01497 +1.1 5.7 hypothetical protein compare
MPMX19_00858 +1.1 5.0 Flagellar biosynthetic protein FliP compare
MPMX19_01486 +1.1 8.4 Flagellar L-ring protein compare
MPMX19_01495 +1.1 3.3 hypothetical protein compare
MPMX19_04200 +1.1 7.8 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase compare
MPMX19_00311 +1.1 10.4 hypothetical protein compare
MPMX19_00208 +1.1 3.4 hypothetical protein compare
MPMX19_03631 +1.1 2.3 hypothetical protein compare
MPMX19_04222 +1.1 9.6 hypothetical protein compare
MPMX19_00854 +1.1 10.2 hypothetical protein compare
MPMX19_04204 +1.1 8.3 D-alanine--D-alanyl carrier protein ligase compare
MPMX19_06580 +1.1 6.9 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_00863 +1.1 7.2 Flagellar basal-body rod protein FlgC compare
MPMX19_04209 +1.1 9.0 Lipopolysaccharide assembly protein B compare
MPMX19_05714 +1.1 7.6 hypothetical protein compare
MPMX19_04212 +1.1 8.8 Photosystem I assembly protein Ycf3 compare
MPMX19_00862 +1.1 7.7 hypothetical protein compare
MPMX19_05678 +1.0 7.4 hypothetical protein compare
MPMX19_04223 +1.0 9.4 hypothetical protein compare
MPMX19_00867 +1.0 9.2 Flagellar biosynthetic protein FlhB compare
MPMX19_04726 +1.0 4.1 Glycine betaine/choline transport system permease protein OusW compare
MPMX19_00708 +1.0 8.1 hypothetical protein compare
MPMX19_04224 +1.0 9.4 hypothetical protein compare
MPMX19_04089 +1.0 8.7 Flagellar biosynthesis protein FlhA compare
MPMX19_06582 +1.0 8.5 hypothetical protein compare
MPMX19_00866 +1.0 6.3 Flagellar biosynthetic protein FliR compare
MPMX19_05575 +0.9 4.1 hypothetical protein compare
MPMX19_04092 +0.9 5.8 Flagellar motor switch protein FliN compare
MPMX19_04202 +0.9 4.4 Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system compare
MPMX19_00438 +0.9 7.9 (R)-specific enoyl-CoA hydratase compare
MPMX19_02668 +0.9 6.5 RNA polymerase sigma-54 factor 2 compare
MPMX19_06539 +0.9 2.1 hypothetical protein compare
MPMX19_05622 +0.9 7.0 Sensor histidine kinase RegB compare
MPMX19_06510 +0.9 2.4 Aliphatic sulfonates import ATP-binding protein SsuB compare
MPMX19_04622 +0.9 6.8 hypothetical protein compare
MPMX19_02801 +0.9 2.3 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_05688 +0.9 5.8 Sensor histidine kinase RcsC compare
MPMX19_00853 +0.8 6.4 hypothetical protein compare
MPMX19_01702 +0.8 2.7 Inorganic triphosphatase compare
MPMX19_00212 +0.8 7.1 Nitrogen fixation regulation protein FixK compare
MPMX19_00334 +0.8 2.3 hypothetical protein compare
MPMX19_06578 +0.8 5.8 hypothetical protein compare
MPMX19_03439 +0.8 2.1 hypothetical protein compare
MPMX19_01496 +0.8 5.8 hypothetical protein compare
MPMX19_04623 +0.8 4.5 hypothetical protein compare
MPMX19_02746 +0.8 5.8 Peptidyl-lysine N-acetyltransferase Pat compare
MPMX19_05534 +0.8 2.0 DNA gyrase inhibitor YacG compare
MPMX19_01781 +0.8 6.2 Enoyl-[acyl-carrier-protein] reductase [NADH] FabI compare
MPMX19_03093 +0.8 3.0 Manganese import ATP-binding protein ScaC compare
MPMX19_04280 +0.8 2.3 hypothetical protein compare
MPMX19_03308 +0.8 3.3 hypothetical protein compare
MPMX19_04551 +0.8 1.7 HTH-type transcriptional repressor RspR compare
MPMX19_05623 +0.8 3.4 Photosynthetic apparatus regulatory protein RegA compare
MPMX19_04968 +0.8 2.5 hypothetical protein compare
MPMX19_03897 +0.8 2.4 hypothetical protein compare
MPMX19_00074 +0.7 1.5 Electron transfer flavoprotein subunit beta compare
MPMX19_04449 +0.7 1.7 Inosine-5'-monophosphate dehydrogenase compare
MPMX19_02116 +0.7 1.9 Cold shock protein CspA compare
MPMX19_04091 +0.7 4.7 Chemotaxis protein PomA compare
MPMX19_06027 +0.7 2.8 hypothetical protein compare
MPMX19_06610 +0.7 1.6 hypothetical protein compare
MPMX19_02634 +0.7 2.8 DNA-binding transcriptional regulator BolA compare
MPMX19_06917 +0.7 2.6 HTH-type transcriptional regulator PgrR compare
MPMX19_02039 +0.7 3.4 hypothetical protein compare
MPMX19_00515 +0.7 5.1 hypothetical protein compare
MPMX19_00335 +0.7 1.9 Magnesium transport protein CorA compare
MPMX19_04624 +0.7 4.2 hypothetical protein compare
MPMX19_04531 +0.6 1.8 hypothetical protein compare
MPMX19_06547 +0.6 3.9 hypothetical protein compare
MPMX19_06862 +0.6 1.6 hypothetical protein compare
MPMX19_01949 +0.6 5.8 Chemotaxis protein CheW compare
MPMX19_06221 +0.6 3.2 L-2-keto-3-deoxyarabonate dehydratase compare
MPMX19_02492 +0.6 2.5 hypothetical protein compare
MPMX19_04913 +0.6 1.4 hypothetical protein compare
MPMX19_01075 +0.6 1.2 Molybdopterin synthase sulfur carrier subunit compare
MPMX19_06498 +0.6 2.4 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_06520 +0.6 1.9 Nitrate import ATP-binding protein NrtC compare
MPMX19_04799 +0.6 2.7 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_06644 +0.6 5.6 GDP-mannose 4,6-dehydratase compare
MPMX19_06141 +0.6 2.1 Intermembrane phospholipid transport system permease protein MlaE compare
MPMX19_06099 +0.6 4.9 hypothetical protein compare
MPMX19_03509 +0.6 2.3 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic compare
MPMX19_01498 +0.6 4.7 hypothetical protein compare
MPMX19_03655 +0.6 1.4 hypothetical protein compare
MPMX19_01159 +0.6 5.0 Presqualene diphosphate synthase compare
MPMX19_01652 +0.6 2.3 hypothetical protein compare
MPMX19_06585 +0.6 5.4 hypothetical protein compare
MPMX19_05555 +0.6 3.2 Protein-glutamate methylesterase/protein-glutamine glutaminase compare
MPMX19_06734 +0.6 5.4 Alginate biosynthesis protein AlgA compare
MPMX19_03123 +0.6 1.4 Citrate lyase acyl carrier protein compare
MPMX19_01426 +0.6 0.8 hypothetical protein compare
MPMX19_00044 +0.6 2.0 hypothetical protein compare
MPMX19_04669 +0.6 1.9 Glucose 1-dehydrogenase compare
MPMX19_04680 +0.6 1.6 Inner membrane ABC transporter permease protein YdcV compare
MPMX19_03549 +0.6 1.6 HTH-type transcriptional regulator PgrR compare
MPMX19_00861 +0.6 4.1 hypothetical protein compare
MPMX19_00872 +0.6 2.2 hypothetical protein compare
MPMX19_03699 +0.6 1.8 Maltose/maltodextrin import ATP-binding protein MalK compare
MPMX19_06575 +0.6 3.8 hypothetical protein compare
MPMX19_04087 +0.6 2.0 Flagellum site-determining protein YlxH compare
MPMX19_05606 +0.6 1.3 hypothetical protein compare
MPMX19_02727 +0.6 1.9 hypothetical protein compare
MPMX19_03396 +0.6 2.1 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_04484 +0.6 2.5 2-iminobutanoate/2-iminopropanoate deaminase compare
MPMX19_05684 +0.5 3.6 Chemotaxis protein methyltransferase 1 compare
MPMX19_00297 +0.5 1.1 4-carboxy-4-hydroxy-2-oxoadipate aldolase compare
MPMX19_05295 +0.5 1.1 hypothetical protein compare
MPMX19_05621 +0.5 3.1 ABC transporter ATP-binding protein NatA compare
MPMX19_02850 +0.5 1.4 Glyceraldehyde-3-phosphate dehydrogenase 1 compare
MPMX19_01445 +0.5 2.0 hypothetical protein compare
MPMX19_02816 +0.5 1.6 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_00049 +0.5 1.9 hypothetical protein compare
MPMX19_00813 +0.5 1.3 HTH-type transcriptional regulator CysL compare
MPMX19_03965 +0.5 4.8 Poly(3-hydroxyalkanoate) polymerase subunit PhaC compare
MPMX19_01605 +0.5 3.5 Chemotaxis protein CheY compare
MPMX19_00851 +0.5 3.3 hypothetical protein compare
MPMX19_01178 +0.5 4.6 hypothetical protein compare
MPMX19_05176 +0.5 0.9 4-hydroxy-3-prenylphenylpyruvate oxygenase/4-hydroxy-3-prenylbenzoate synthase compare
MPMX19_06150 +0.5 2.4 Corrinoid adenosyltransferase compare
MPMX19_03710 +0.5 2.1 Glycine cleavage system transcriptional activator compare
MPMX19_05906 +0.5 1.2 hypothetical protein compare
MPMX19_02149 +0.5 1.8 hypothetical protein compare
MPMX19_04735 +0.5 2.6 hypothetical protein compare
MPMX19_06584 +0.5 4.7 Asparagine synthetase [glutamine-hydrolyzing] 1 compare
MPMX19_04501 +0.5 1.5 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_01141 +0.5 2.3 hypothetical protein compare
MPMX19_00544 +0.5 1.0 hypothetical protein compare
MPMX19_00725 +0.5 2.9 Transcriptional regulatory protein ros compare
MPMX19_01401 +0.5 1.1 Ubiquinone biosynthesis accessory factor UbiK compare
MPMX19_04085 +0.5 1.7 hypothetical protein compare
MPMX19_00543 +0.5 1.7 Molybdenum cofactor guanylyltransferase compare
MPMX19_02703 +0.5 1.3 hypothetical protein compare
MPMX19_02313 +0.5 3.2 Oxygen-independent coproporphyrinogen III oxidase compare
MPMX19_06526 +0.5 2.1 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_05470 +0.5 1.9 hypothetical protein compare
MPMX19_00788 +0.5 2.3 Chemotaxis protein CheY compare
MPMX19_06773 +0.5 1.4 2-(R)-hydroxypropyl-CoM dehydrogenase compare
MPMX19_03871 +0.5 1.2 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_01618 +0.5 3.7 hypothetical protein compare
MPMX19_06930 +0.5 1.2 Sensor kinase CckA compare
MPMX19_00068 +0.5 2.2 hypothetical protein compare
MPMX19_00211 +0.5 1.7 putative copper-importing P-type ATPase A compare
MPMX19_05745 +0.5 3.3 Sensor histidine kinase RcsC compare
MPMX19_01875 +0.5 1.9 hypothetical protein compare
MPMX19_02514 +0.5 0.9 hypothetical protein compare
MPMX19_05362 +0.5 1.2 hypothetical protein compare
MPMX19_00370 +0.5 1.6 hypothetical protein compare
MPMX19_06042 +0.5 2.5 hypothetical protein compare
MPMX19_00244 +0.5 1.9 hypothetical protein compare
MPMX19_05063 +0.4 2.0 Histone deacetylase-like amidohydrolase compare
MPMX19_02062 +0.4 1.8 Maleylpyruvate isomerase compare
MPMX19_02041 +0.4 1.4 Protein YciI compare
MPMX19_02817 +0.4 1.1 Serine 3-dehydrogenase compare
MPMX19_06691 +0.4 1.3 hypothetical protein compare
MPMX19_01914 +0.4 3.4 hypothetical protein compare
MPMX19_02611 +0.4 1.7 hypothetical protein compare
MPMX19_04332 +0.4 2.2 hypothetical protein compare
MPMX19_06594 +0.4 4.0 hypothetical protein compare
MPMX19_06197 +0.4 0.6 hypothetical protein compare
MPMX19_05719 +0.4 1.0 hypothetical protein compare
MPMX19_00317 +0.4 3.2 hypothetical protein compare
MPMX19_02660 +0.4 1.9 Inner membrane protein YbjJ compare
MPMX19_05850 +0.4 1.2 hypothetical protein compare
MPMX19_01438 +0.4 2.4 hypothetical protein compare
MPMX19_04240 +0.4 1.1 Lipopolysaccharide export system ATP-binding protein LptB compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm; high oxygen experiments