Experiment set1S60 for Azospirillum sp. SherDot2

Compare to:

NL-CCM; spin-x control

200 most detrimental genes:

  gene name fitness t score description  
MPMX19_00208 +1.1 3.5 hypothetical protein compare
MPMX19_06519 +1.0 1.8 HTH-type transcriptional repressor NagR compare
MPMX19_05176 +1.0 2.2 4-hydroxy-3-prenylphenylpyruvate oxygenase/4-hydroxy-3-prenylbenzoate synthase compare
MPMX19_06197 +1.0 2.4 hypothetical protein compare
MPMX19_05193 +1.0 1.8 Taurine-binding periplasmic protein compare
MPMX19_03123 +1.0 2.8 Citrate lyase acyl carrier protein compare
MPMX19_03157 +0.9 2.0 hypothetical protein compare
MPMX19_06193 +0.9 3.0 Flagellar hook-basal body complex protein FliE compare
MPMX19_00414 +0.9 2.4 Pyruvate dehydrogenase complex repressor compare
MPMX19_02815 +0.8 2.3 2-keto-4-pentenoate hydratase compare
MPMX19_05825 +0.8 2.7 hypothetical protein compare
MPMX19_05203 +0.8 2.5 hypothetical protein compare
MPMX19_03262 +0.8 2.9 putative HTH-type transcriptional repressor ExuR compare
MPMX19_03450 +0.8 1.7 hypothetical protein compare
MPMX19_05207 +0.8 2.2 Hemolysin secretion protein D, plasmid compare
MPMX19_01479 +0.8 4.9 hypothetical protein compare
MPMX19_02580 +0.7 2.3 Acetyltransferase compare
MPMX19_05850 +0.7 2.2 hypothetical protein compare
MPMX19_06488 +0.7 2.5 Taurine-binding periplasmic protein compare
MPMX19_03549 +0.7 2.1 HTH-type transcriptional regulator PgrR compare
MPMX19_06661 +0.7 3.9 hypothetical protein compare
MPMX19_04202 +0.7 3.6 Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system compare
MPMX19_04551 +0.7 1.6 HTH-type transcriptional repressor RspR compare
MPMX19_06866 +0.7 1.9 HTH-type transcriptional regulator NimR compare
MPMX19_00134 +0.7 2.3 hypothetical protein compare
MPMX19_03868 +0.6 2.5 Xylitol-binding protein compare
MPMX19_00258 +0.6 2.3 Protein ImuB compare
MPMX19_03866 +0.6 1.7 Ribose import permease protein RbsC compare
MPMX19_00687 +0.6 1.4 hypothetical protein compare
MPMX19_01270 +0.6 2.8 L-threonine ammonia-lyase compare
MPMX19_01073 +0.6 2.8 5'-nucleotidase compare
MPMX19_01283 +0.6 1.6 hypothetical protein compare
MPMX19_03141 +0.6 2.2 hypothetical protein compare
MPMX19_04095 +0.6 2.7 hypothetical protein compare
MPMX19_06888 +0.6 2.7 hypothetical protein compare
MPMX19_02816 +0.6 1.4 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_05254 +0.6 1.2 Carbon monoxide dehydrogenase small chain compare
MPMX19_04682 +0.6 1.3 hypothetical protein compare
MPMX19_00212 +0.6 5.0 Nitrogen fixation regulation protein FixK compare
MPMX19_02801 +0.6 1.2 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_05231 +0.6 2.6 1,2-epoxyphenylacetyl-CoA isomerase compare
MPMX19_04118 +0.6 1.7 Sensor histidine kinase RcsC compare
MPMX19_03308 +0.6 2.6 hypothetical protein compare
MPMX19_05586 +0.6 1.2 hypothetical protein compare
MPMX19_06223 +0.6 2.5 HTH-type transcriptional regulator GbpR compare
MPMX19_06778 +0.6 2.2 HTH-type transcriptional regulator YhaJ compare
MPMX19_01067 +0.6 1.3 hypothetical protein compare
MPMX19_03948 +0.6 1.4 tRNA-Ser compare
MPMX19_01704 +0.6 1.2 hypothetical protein compare
MPMX19_06467 +0.6 2.4 hypothetical protein compare
MPMX19_00813 +0.6 1.1 HTH-type transcriptional regulator CysL compare
MPMX19_05882 +0.5 2.6 hypothetical protein compare
MPMX19_05690 +0.5 3.9 Protein phosphotransferase ChpT compare
MPMX19_04738 +0.5 1.4 hypothetical protein compare
MPMX19_04677 +0.5 2.3 Sulfate/thiosulfate import ATP-binding protein CysA compare
MPMX19_04680 +0.5 2.1 Inner membrane ABC transporter permease protein YdcV compare
MPMX19_00317 +0.5 4.0 hypothetical protein compare
MPMX19_04963 +0.5 1.5 Cysteine desulfurase IscS compare
MPMX19_04913 +0.5 1.1 hypothetical protein compare
MPMX19_03340 +0.5 1.5 hypothetical protein compare
MPMX19_02310 +0.5 1.7 hypothetical protein compare
MPMX19_03287 +0.5 2.7 6-aminohexanoate-cyclic-dimer hydrolase compare
MPMX19_00112 +0.5 2.2 Multidrug transporter EmrE compare
MPMX19_05762 +0.5 2.0 hypothetical protein compare
MPMX19_05989 +0.5 1.7 HTH-type transcriptional regulator HdfR compare
MPMX19_03169 +0.5 1.1 Dihydroanticapsin 7-dehydrogenase compare
MPMX19_06464 +0.5 2.1 Tryptophan synthase beta chain compare
MPMX19_06495 +0.5 2.5 hypothetical protein compare
MPMX19_00576 +0.5 1.4 hypothetical protein compare
MPMX19_06776 +0.5 2.2 hypothetical protein compare
MPMX19_02058 +0.5 1.6 hypothetical protein compare
MPMX19_00544 +0.5 1.3 hypothetical protein compare
MPMX19_05295 +0.5 1.4 hypothetical protein compare
MPMX19_04120 +0.5 1.6 hypothetical protein compare
MPMX19_06385 +0.5 1.4 hypothetical protein compare
MPMX19_00686 +0.5 1.8 hypothetical protein compare
MPMX19_00887 +0.5 1.2 hypothetical protein compare
MPMX19_01604 +0.5 2.8 hypothetical protein compare
MPMX19_00611 +0.5 2.4 (3S)-malyl-CoA thioesterase compare
MPMX19_03772 +0.5 1.5 hypothetical protein compare
MPMX19_05324 +0.5 3.1 hypothetical protein compare
MPMX19_06930 +0.5 1.3 Sensor kinase CckA compare
MPMX19_03710 +0.5 1.8 Glycine cleavage system transcriptional activator compare
MPMX19_05178 +0.5 2.4 Alkanesulfonate monooxygenase compare
MPMX19_02430 +0.5 3.1 hypothetical protein compare
MPMX19_01120 +0.5 2.9 Fructose-1, 6-bisphosphatase/inositol-1-monophosphatase compare
MPMX19_01643 +0.5 2.8 hypothetical protein compare
MPMX19_02514 +0.5 0.7 hypothetical protein compare
MPMX19_05901 +0.5 1.2 Motility protein B compare
MPMX19_04636 +0.5 1.4 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_00294 +0.5 1.7 Adaptive-response sensory-kinase SasA compare
MPMX19_06933 +0.5 1.5 Manganese transport system ATP-binding protein MntB compare
MPMX19_06299 +0.4 2.1 hypothetical protein compare
MPMX19_00244 +0.4 2.2 hypothetical protein compare
MPMX19_06843 +0.4 1.3 hypothetical protein compare
MPMX19_03219 +0.4 1.7 putative ABC transporter ATP-binding protein YheS compare
MPMX19_05152 +0.4 1.5 Phosphonoacetaldehyde hydrolase compare
MPMX19_06327 +0.4 0.8 hypothetical protein compare
MPMX19_04192 +0.4 2.2 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
MPMX19_06979 +0.4 1.5 hypothetical protein compare
MPMX19_05067 +0.4 1.7 hypothetical protein compare
MPMX19_03760 +0.4 1.7 Ribose import binding protein RbsB compare
MPMX19_00580 +0.4 1.9 hypothetical protein compare
MPMX19_02248 +0.4 1.7 hypothetical protein compare
MPMX19_02880 +0.4 2.5 hypothetical protein compare
MPMX19_06886 +0.4 2.2 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_02136 +0.4 0.9 Phage shock protein A compare
MPMX19_06486 +0.4 1.4 Phenylacetate-coenzyme A ligase compare
MPMX19_04726 +0.4 1.4 Glycine betaine/choline transport system permease protein OusW compare
MPMX19_04501 +0.4 1.6 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_06355 +0.4 1.9 hypothetical protein compare
MPMX19_04781 +0.4 2.1 hypothetical protein compare
MPMX19_03472 +0.4 1.5 Fatty acid metabolism regulator protein compare
MPMX19_00423 +0.4 1.9 (E)-2-((N-methylformamido)methylene)succinate hydrolase compare
MPMX19_02913 +0.4 2.4 hypothetical protein compare
MPMX19_04447 +0.4 2.2 hypothetical protein compare
MPMX19_06216 +0.4 1.9 Inner membrane ABC transporter permease protein YtfT compare
MPMX19_05104 +0.4 1.1 hypothetical protein compare
MPMX19_05813 +0.4 1.4 2-hydroxy-3-oxopropionate reductase compare
MPMX19_03375 +0.4 2.0 Outer membrane protein TolC compare
MPMX19_05198 +0.4 2.4 hypothetical protein compare
MPMX19_00725 +0.4 2.4 Transcriptional regulatory protein ros compare
MPMX19_01128 +0.4 2.1 hypothetical protein compare
MPMX19_03819 +0.4 1.7 NADP-reducing hydrogenase subunit HndA compare
MPMX19_00173 +0.4 1.2 hypothetical protein compare
MPMX19_02608 +0.4 1.9 hypothetical protein compare
MPMX19_05717 +0.4 2.2 hypothetical protein compare
MPMX19_03937 +0.4 1.5 Acyl-CoA dehydrogenase compare
MPMX19_05551 +0.4 1.4 Chemotaxis protein CheY compare
MPMX19_01349 +0.4 2.7 hypothetical protein compare
MPMX19_06171 +0.4 2.3 hypothetical protein compare
MPMX19_06901 +0.4 1.9 Alpha-ketoglutaric semialdehyde dehydrogenase compare
MPMX19_03265 +0.4 2.6 Spermidine/putrescine import ATP-binding protein PotA compare
MPMX19_06579 +0.4 1.6 Carnitine monooxygenase oxygenase subunit compare
MPMX19_05787 +0.4 1.7 Methylglyoxal synthase compare
MPMX19_03126 +0.4 1.3 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase compare
MPMX19_04687 +0.4 1.0 Atrazine chlorohydrolase compare
MPMX19_03277 +0.4 2.1 hypothetical protein compare
MPMX19_03846 +0.4 1.1 hypothetical protein compare
MPMX19_00792 +0.4 2.3 hypothetical protein compare
MPMX19_02794 +0.4 2.5 hypothetical protein compare
MPMX19_01089 +0.4 2.3 hypothetical protein compare
MPMX19_00975 +0.4 2.0 hypothetical protein compare
MPMX19_00878 +0.4 2.0 Guanidinium exporter compare
MPMX19_05143 +0.4 0.8 hypothetical protein compare
MPMX19_06476 +0.4 2.2 HTH-type transcriptional regulator ArgP compare
MPMX19_01244 +0.4 1.4 hypothetical protein compare
MPMX19_05015 +0.4 2.2 hypothetical protein compare
MPMX19_02611 +0.4 1.7 hypothetical protein compare
MPMX19_06456 +0.4 0.6 hypothetical protein compare
MPMX19_05786 +0.4 1.5 HTH-type transcriptional repressor RspR compare
MPMX19_05445 +0.4 1.4 tRNA-Glu compare
MPMX19_01445 +0.4 1.3 hypothetical protein compare
MPMX19_05181 +0.4 0.8 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_02819 +0.4 1.8 hypothetical protein compare
MPMX19_00209 +0.4 2.4 Cbb3-type cytochrome c oxidase subunit FixP compare
MPMX19_03085 +0.4 1.0 Hydrogen peroxide-inducible genes activator compare
MPMX19_00020 +0.4 0.9 hypothetical protein compare
MPMX19_00944 +0.4 2.5 hypothetical protein compare
MPMX19_01614 +0.4 0.9 hypothetical protein compare
MPMX19_05858 +0.4 2.2 3-oxoadipate CoA-transferase subunit B compare
MPMX19_05036 +0.4 1.9 hypothetical protein compare
MPMX19_04743 +0.4 1.6 Formyltransferase/hydrolase complex subunit D compare
MPMX19_00334 +0.4 1.0 hypothetical protein compare
MPMX19_01755 +0.4 1.5 hypothetical protein compare
MPMX19_02531 +0.4 0.8 hypothetical protein compare
MPMX19_03100 +0.4 1.9 hypothetical protein compare
MPMX19_02511 +0.4 1.0 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase compare
MPMX19_05199 +0.4 1.7 Zinc transport protein ZntB compare
MPMX19_01832 +0.4 1.3 hypothetical protein compare
MPMX19_05014 +0.4 1.1 Cytochrome c1 compare
MPMX19_04693 +0.4 1.8 hypothetical protein compare
MPMX19_04876 +0.4 1.9 hypothetical protein compare
MPMX19_03014 +0.4 1.7 Transcriptional activatory protein AadR compare
MPMX19_06520 +0.4 1.0 Nitrate import ATP-binding protein NrtC compare
MPMX19_00207 +0.4 1.9 hypothetical protein compare
MPMX19_05618 +0.4 1.6 putative manganese efflux pump MntP compare
MPMX19_05060 +0.4 2.0 hypothetical protein compare
MPMX19_02220 +0.4 1.5 hypothetical protein compare
MPMX19_06763 +0.4 1.6 hypothetical protein compare
MPMX19_03900 +0.4 1.8 Hca operon transcriptional activator HcaR compare
MPMX19_02633 +0.4 2.4 Chaperone protein DnaJ compare
MPMX19_06061 +0.4 2.1 Solute-binding protein compare
MPMX19_06412 +0.4 2.1 Transcriptional regulatory protein OmpR compare
MPMX19_00734 +0.4 2.8 Riboflavin biosynthesis protein RibBA compare
MPMX19_00116 +0.4 1.7 Large-conductance mechanosensitive channel compare
MPMX19_03676 +0.4 1.2 hypothetical protein compare
MPMX19_04986 +0.4 1.1 hypothetical protein compare
MPMX19_00253 +0.4 2.3 FtsZ-localized protein A compare
MPMX19_05023 +0.4 0.9 hypothetical protein compare
MPMX19_04893 +0.4 1.4 hypothetical protein compare
MPMX19_03090 +0.4 2.4 Macrolide export ATP-binding/permease protein MacB compare
MPMX19_00225 +0.4 2.1 hypothetical protein compare
MPMX19_00005 +0.4 1.3 hypothetical protein compare
MPMX19_02909 +0.3 1.7 Cytochrome c oxidase subunit 3 compare
MPMX19_06506 +0.3 0.9 hypothetical protein compare
MPMX19_02847 +0.3 2.0 Acetate kinase compare
MPMX19_04740 +0.3 1.1 hypothetical protein compare
MPMX19_05298 +0.3 1.6 Periplasmic [NiFeSe] hydrogenase large subunit compare
MPMX19_04053 +0.3 1.0 Transcriptional regulatory protein OmpR compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm; spin-x control experiments