Experiment set1S59 for Azospirillum sp. SherDot2

Compare to:

NL-CCM; spin-x control

200 most detrimental genes:

  gene name fitness t score description  
MPMX19_06197 +1.1 2.5 hypothetical protein compare
MPMX19_01067 +0.9 2.5 hypothetical protein compare
MPMX19_03959 +0.9 1.7 hypothetical protein compare
MPMX19_03655 +0.8 2.3 hypothetical protein compare
MPMX19_03552 +0.8 2.7 hypothetical protein compare
MPMX19_05176 +0.8 1.8 4-hydroxy-3-prenylphenylpyruvate oxygenase/4-hydroxy-3-prenylbenzoate synthase compare
MPMX19_03868 +0.8 2.6 Xylitol-binding protein compare
MPMX19_03123 +0.8 2.1 Citrate lyase acyl carrier protein compare
MPMX19_06610 +0.8 2.3 hypothetical protein compare
MPMX19_06272 +0.8 1.2 hypothetical protein compare
MPMX19_03549 +0.7 2.1 HTH-type transcriptional regulator PgrR compare
MPMX19_06843 +0.7 2.8 hypothetical protein compare
MPMX19_05254 +0.7 1.3 Carbon monoxide dehydrogenase small chain compare
MPMX19_04673 +0.7 2.1 Purine ribonucleoside efflux pump NepI compare
MPMX19_06467 +0.7 3.3 hypothetical protein compare
MPMX19_02816 +0.7 2.4 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_06193 +0.7 2.3 Flagellar hook-basal body complex protein FliE compare
MPMX19_03169 +0.7 1.5 Dihydroanticapsin 7-dehydrogenase compare
MPMX19_03710 +0.7 2.7 Glycine cleavage system transcriptional activator compare
MPMX19_03667 +0.7 2.2 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_03635 +0.7 0.9 DNA-binding transcriptional activator DecR compare
MPMX19_02804 +0.7 1.5 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial compare
MPMX19_05624 +0.6 1.7 hypothetical protein compare
MPMX19_05534 +0.6 1.5 DNA gyrase inhibitor YacG compare
MPMX19_06866 +0.6 2.6 HTH-type transcriptional regulator NimR compare
MPMX19_00166 +0.6 0.9 hypothetical protein compare
MPMX19_05906 +0.6 1.4 hypothetical protein compare
MPMX19_05656 +0.6 1.6 HTH-type transcriptional activator RhaR compare
MPMX19_00212 +0.6 5.2 Nitrogen fixation regulation protein FixK compare
MPMX19_02031 +0.6 1.4 tRNA (cytidine/uridine/adenosine-2'-O-)-methyltransferase TrmJ compare
MPMX19_03063 +0.6 1.5 hypothetical protein compare
MPMX19_05690 +0.6 4.2 Protein phosphotransferase ChpT compare
MPMX19_03666 +0.6 2.7 hypothetical protein compare
MPMX19_03195 +0.6 0.9 hypothetical protein compare
MPMX19_00718 +0.6 2.0 hypothetical protein compare
MPMX19_00923 +0.6 2.5 hypothetical protein compare
MPMX19_05393 +0.6 2.0 hypothetical protein compare
MPMX19_05096 +0.6 2.4 L-cystine import ATP-binding protein TcyC compare
MPMX19_00258 +0.6 2.1 Protein ImuB compare
MPMX19_01864 +0.6 1.8 Regulatory protein AtoC compare
MPMX19_05207 +0.6 0.9 Hemolysin secretion protein D, plasmid compare
MPMX19_03816 +0.6 1.1 hypothetical protein compare
MPMX19_03083 +0.5 1.9 hypothetical protein compare
MPMX19_01073 +0.5 2.2 5'-nucleotidase compare
MPMX19_06211 +0.5 2.0 tRNA-Ala compare
MPMX19_00318 +0.5 2.8 hypothetical protein compare
MPMX19_00068 +0.5 2.6 hypothetical protein compare
MPMX19_03595 +0.5 3.6 C4-dicarboxylate transport protein 2 compare
MPMX19_02532 +0.5 1.5 Cytochrome c-type biogenesis protein CcmE compare
MPMX19_06795 +0.5 1.8 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase compare
MPMX19_03916 +0.5 1.6 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
MPMX19_00244 +0.5 2.4 hypothetical protein compare
MPMX19_03915 +0.5 2.0 hypothetical protein compare
MPMX19_02819 +0.5 2.9 hypothetical protein compare
MPMX19_04682 +0.5 1.0 hypothetical protein compare
MPMX19_05623 +0.5 2.2 Photosynthetic apparatus regulatory protein RegA compare
MPMX19_06569 +0.5 2.2 hypothetical protein compare
MPMX19_03676 +0.5 2.1 hypothetical protein compare
MPMX19_00875 +0.5 1.9 hypothetical protein compare
MPMX19_00206 +0.5 3.9 Cytochrome c oxidase subunit 1, bacteroid compare
MPMX19_06012 +0.5 2.0 Transcriptional regulatory protein DegU compare
MPMX19_05043 +0.5 2.4 hypothetical protein compare
MPMX19_03476 +0.5 1.9 hypothetical protein compare
MPMX19_06661 +0.5 2.4 hypothetical protein compare
MPMX19_03939 +0.5 1.9 Enoyl-CoA-hydratase compare
MPMX19_02815 +0.5 1.5 2-keto-4-pentenoate hydratase compare
MPMX19_03421 +0.5 1.2 hypothetical protein compare
MPMX19_05193 +0.5 1.1 Taurine-binding periplasmic protein compare
MPMX19_00074 +0.5 1.6 Electron transfer flavoprotein subunit beta compare
MPMX19_06526 +0.5 2.0 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_04699 +0.5 2.0 hypothetical protein compare
MPMX19_04741 +0.5 2.2 Formyltransferase/hydrolase complex Fhc subunit B compare
MPMX19_00208 +0.5 1.0 hypothetical protein compare
MPMX19_05060 +0.5 2.7 hypothetical protein compare
MPMX19_06488 +0.5 1.0 Taurine-binding periplasmic protein compare
MPMX19_06887 +0.5 1.7 Adenine deaminase compare
MPMX19_04726 +0.5 2.0 Glycine betaine/choline transport system permease protein OusW compare
MPMX19_01947 +0.5 1.5 Chemotaxis protein CheY compare
MPMX19_04648 +0.5 2.2 hypothetical protein compare
MPMX19_05901 +0.5 1.6 Motility protein B compare
MPMX19_03112 +0.5 1.8 Ribonuclease BN compare
MPMX19_01415 +0.5 1.3 hypothetical protein compare
MPMX19_02706 +0.5 1.6 hypothetical protein compare
MPMX19_06137 +0.5 1.4 hypothetical protein compare
MPMX19_04051 +0.5 2.2 Alcohol dehydrogenase compare
MPMX19_06156 +0.5 1.2 hypothetical protein compare
MPMX19_05068 +0.5 1.6 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA compare
MPMX19_05016 +0.5 0.8 Sensor histidine kinase RcsC compare
MPMX19_04531 +0.4 1.9 hypothetical protein compare
MPMX19_00152 +0.4 1.3 hypothetical protein compare
MPMX19_05685 +0.4 3.2 Protein-glutamate methylesterase/protein-glutamine glutaminase 2 compare
MPMX19_05333 +0.4 1.2 Thymidine phosphorylase compare
MPMX19_03396 +0.4 1.9 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_03757 +0.4 1.4 D-ribose pyranase compare
MPMX19_03069 +0.4 1.2 hypothetical protein compare
MPMX19_00890 +0.4 1.2 hypothetical protein compare
MPMX19_02953 +0.4 2.6 Ribose import ATP-binding protein RbsA compare
MPMX19_01460 +0.4 2.2 hypothetical protein compare
MPMX19_00577 +0.4 2.0 Ribosomal RNA small subunit methyltransferase E compare
MPMX19_03090 +0.4 2.7 Macrolide export ATP-binding/permease protein MacB compare
MPMX19_04737 +0.4 1.8 Methenyltetrahydromethanopterin cyclohydrolase compare
MPMX19_04560 +0.4 1.7 hypothetical protein compare
MPMX19_02787 +0.4 1.4 (R)-benzylsuccinyl-CoA dehydrogenase compare
MPMX19_04082 +0.4 2.2 hypothetical protein compare
MPMX19_03097 +0.4 2.3 hypothetical protein compare
MPMX19_04670 +0.4 1.8 hypothetical protein compare
MPMX19_04743 +0.4 1.8 Formyltransferase/hydrolase complex subunit D compare
MPMX19_05152 +0.4 1.2 Phosphonoacetaldehyde hydrolase compare
MPMX19_02604 +0.4 1.9 Mycothiol acetyltransferase compare
MPMX19_01454 +0.4 1.4 hypothetical protein compare
MPMX19_04551 +0.4 1.0 HTH-type transcriptional repressor RspR compare
MPMX19_04968 +0.4 0.9 hypothetical protein compare
MPMX19_02415 +0.4 1.8 Transcriptional regulatory protein WalR compare
MPMX19_02538 +0.4 1.0 hypothetical protein compare
MPMX19_06819 +0.4 1.0 hypothetical protein compare
MPMX19_05089 +0.4 1.4 Acetyl-CoA acetyltransferase compare
MPMX19_04484 +0.4 2.0 2-iminobutanoate/2-iminopropanoate deaminase compare
MPMX19_05196 +0.4 1.9 Alpha-ketoglutarate-dependent taurine dioxygenase compare
MPMX19_06253 +0.4 1.2 hypothetical protein compare
MPMX19_06528 +0.4 2.9 hypothetical protein compare
MPMX19_02830 +0.4 2.3 N-carbamoyl-L-amino-acid hydrolase compare
MPMX19_06484 +0.4 2.2 hypothetical protein compare
MPMX19_03629 +0.4 2.1 hypothetical protein compare
MPMX19_02401 +0.4 2.5 hypothetical protein compare
MPMX19_05221 +0.4 1.4 hypothetical protein compare
MPMX19_03095 +0.4 1.2 hypothetical protein compare
MPMX19_06981 +0.4 1.3 hypothetical protein compare
MPMX19_02188 +0.4 2.2 hypothetical protein compare
MPMX19_05324 +0.4 2.8 hypothetical protein compare
MPMX19_01702 +0.4 1.1 Inorganic triphosphatase compare
MPMX19_00763 +0.4 2.9 hypothetical protein compare
MPMX19_05687 +0.4 1.9 Chemotaxis protein CheW compare
MPMX19_00966 +0.4 2.0 ATP-dependent zinc metalloprotease FtsH compare
MPMX19_05852 +0.4 1.9 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_06179 +0.4 1.1 putative SURF1-like protein compare
MPMX19_03275 +0.4 1.7 HTH-type transcriptional regulator PgrR compare
MPMX19_05282 +0.4 1.2 1,3,6,8-tetrahydroxynaphthalene synthase compare
MPMX19_04731 +0.4 1.9 hypothetical protein compare
MPMX19_01056 +0.4 2.4 hypothetical protein compare
MPMX19_02366 +0.4 2.4 hypothetical protein compare
MPMX19_06280 +0.4 2.2 Leucine-responsive regulatory protein compare
MPMX19_01088 +0.4 1.7 hypothetical protein compare
MPMX19_00725 +0.4 2.2 Transcriptional regulatory protein ros compare
MPMX19_03824 +0.4 2.5 hypothetical protein compare
MPMX19_05858 +0.4 2.1 3-oxoadipate CoA-transferase subunit B compare
MPMX19_01491 +0.4 1.2 hypothetical protein compare
MPMX19_03350 +0.4 2.7 GTP 3',8-cyclase compare
MPMX19_05198 +0.4 2.1 hypothetical protein compare
MPMX19_06737 +0.4 1.7 2-oxoisovalerate dehydrogenase subunit beta compare
MPMX19_05362 +0.4 0.9 hypothetical protein compare
MPMX19_04380 +0.4 1.9 HTH-type transcriptional repressor AllR compare
MPMX19_03579 +0.4 2.3 Sensor histidine kinase RcsC compare
MPMX19_05876 +0.4 1.9 2-ketogluconate reductase compare
MPMX19_01480 +0.4 1.9 hypothetical protein compare
MPMX19_05031 +0.4 2.2 ATP synthase gamma chain compare
MPMX19_06121 +0.4 1.9 hypothetical protein compare
MPMX19_02395 +0.4 2.2 hypothetical protein compare
MPMX19_00085 +0.4 1.8 hypothetical protein compare
MPMX19_04675 +0.4 2.1 HTH-type transcriptional regulator PgrR compare
MPMX19_06378 +0.4 2.1 hypothetical protein compare
MPMX19_04657 +0.4 2.5 2,3-dimethylmalate lyase compare
MPMX19_00190 +0.4 1.4 hypothetical protein compare
MPMX19_04095 +0.4 1.5 hypothetical protein compare
MPMX19_02095 +0.4 1.6 Ferric uptake regulation protein compare
MPMX19_05622 +0.4 3.0 Sensor histidine kinase RegB compare
MPMX19_02795 +0.4 2.4 Homoaconitase large subunit compare
MPMX19_03331 +0.4 1.6 hypothetical protein compare
MPMX19_03368 +0.4 2.0 hypothetical protein compare
MPMX19_02733 +0.4 2.2 Regulatory protein LuxO compare
MPMX19_05548 +0.4 1.5 D-methionine transport system permease protein MetI compare
MPMX19_04838 +0.4 1.8 Heme oxygenase (staphylobilin-producing) compare
MPMX19_06463 +0.4 2.3 Hydroxycarboxylate dehydrogenase B compare
MPMX19_01059 +0.4 0.6 hypothetical protein compare
MPMX19_02651 +0.4 2.5 hypothetical protein compare
MPMX19_06482 +0.4 1.7 3-mercaptopropionate dioxygenase compare
MPMX19_00822 +0.4 1.8 Divalent metal cation transporter MntH compare
MPMX19_05231 +0.4 2.1 1,2-epoxyphenylacetyl-CoA isomerase compare
MPMX19_05178 +0.4 1.5 Alkanesulfonate monooxygenase compare
MPMX19_05593 +0.4 1.3 Pyrrolidone-carboxylate peptidase compare
MPMX19_05878 +0.4 1.9 L-cystine-binding protein FliY compare
MPMX19_06804 +0.4 1.1 hypothetical protein compare
MPMX19_01061 +0.4 1.7 Glutathione-regulated potassium-efflux system protein KefC compare
MPMX19_03048 +0.4 1.1 hypothetical protein compare
MPMX19_05591 +0.4 2.0 hypothetical protein compare
MPMX19_00638 +0.4 1.7 hypothetical protein compare
MPMX19_00359 +0.4 1.9 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_05507 +0.4 1.9 Transcriptional regulatory protein DegU compare
MPMX19_05191 +0.4 1.8 Phenylacetate-coenzyme A ligase compare
MPMX19_02492 +0.4 1.1 hypothetical protein compare
MPMX19_02034 +0.4 1.7 Peptidoglycan-associated lipoprotein compare
MPMX19_03152 +0.4 3.0 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_05157 +0.4 1.8 hypothetical protein compare
MPMX19_01482 +0.4 2.7 hypothetical protein compare
MPMX19_06984 +0.4 1.3 Mesaconyl-C(4)-CoA hydratase compare
MPMX19_06519 +0.4 0.5 HTH-type transcriptional repressor NagR compare
MPMX19_02865 +0.3 1.6 hypothetical protein compare
MPMX19_05903 +0.3 2.2 hypothetical protein compare
MPMX19_05022 +0.3 2.2 hypothetical protein compare
MPMX19_06326 +0.3 1.2 hypothetical protein compare
MPMX19_06481 +0.3 2.1 Thiosulfate sulfurtransferase GlpE compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm; spin-x control experiments