Experiment set1S58 for Azospirillum sp. SherDot2

Compare to:

NL-CCM; spin-x control

200 most detrimental genes:

  gene name fitness t score description  
MPMX19_06519 +1.2 2.5 HTH-type transcriptional repressor NagR compare
MPMX19_00852 +1.0 3.3 hypothetical protein compare
MPMX19_02514 +0.9 2.3 hypothetical protein compare
MPMX19_00687 +0.9 2.8 hypothetical protein compare
MPMX19_05207 +0.8 2.1 Hemolysin secretion protein D, plasmid compare
MPMX19_06490 +0.8 2.2 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_03262 +0.7 2.9 putative HTH-type transcriptional repressor ExuR compare
MPMX19_00608 +0.7 1.2 hypothetical protein compare
MPMX19_05254 +0.7 1.9 Carbon monoxide dehydrogenase small chain compare
MPMX19_06520 +0.7 2.3 Nitrate import ATP-binding protein NrtC compare
MPMX19_00025 +0.7 2.1 hypothetical protein compare
MPMX19_03123 +0.7 2.0 Citrate lyase acyl carrier protein compare
MPMX19_03816 +0.7 2.2 hypothetical protein compare
MPMX19_04700 +0.7 2.4 Adaptive-response sensory-kinase SasA compare
MPMX19_00544 +0.7 2.1 hypothetical protein compare
MPMX19_04638 +0.7 1.9 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_01947 +0.7 1.9 Chemotaxis protein CheY compare
MPMX19_02937 +0.6 1.1 hypothetical protein compare
MPMX19_04551 +0.6 1.2 HTH-type transcriptional repressor RspR compare
MPMX19_02041 +0.6 1.8 Protein YciI compare
MPMX19_06197 +0.6 0.8 hypothetical protein compare
MPMX19_03462 +0.6 2.5 Acetate CoA-transferase subunit alpha compare
MPMX19_03195 +0.6 1.1 hypothetical protein compare
MPMX19_06773 +0.6 2.1 2-(R)-hydroxypropyl-CoM dehydrogenase compare
MPMX19_03846 +0.6 2.5 hypothetical protein compare
MPMX19_06297 +0.6 1.3 hypothetical protein compare
MPMX19_06467 +0.6 2.5 hypothetical protein compare
MPMX19_06763 +0.6 2.3 hypothetical protein compare
MPMX19_05143 +0.6 1.5 hypothetical protein compare
MPMX19_04694 +0.6 1.9 Na(+)/H(+) antiporter subunit E1 compare
MPMX19_06743 +0.6 1.3 Chemotaxis protein CheA compare
MPMX19_01061 +0.6 3.6 Glutathione-regulated potassium-efflux system protein KefC compare
MPMX19_00212 +0.6 4.7 Nitrogen fixation regulation protein FixK compare
MPMX19_03897 +0.6 1.9 hypothetical protein compare
MPMX19_03655 +0.6 1.5 hypothetical protein compare
MPMX19_05606 +0.6 1.6 hypothetical protein compare
MPMX19_05656 +0.5 1.4 HTH-type transcriptional activator RhaR compare
MPMX19_02248 +0.5 2.2 hypothetical protein compare
MPMX19_01811 +0.5 1.6 hypothetical protein compare
MPMX19_04207 +0.5 2.2 hypothetical protein compare
MPMX19_06808 +0.5 1.5 HTH-type transcriptional regulator DmlR compare
MPMX19_05470 +0.5 2.1 hypothetical protein compare
MPMX19_06373 +0.5 1.3 Lipoprotein signal peptidase compare
MPMX19_00074 +0.5 1.4 Electron transfer flavoprotein subunit beta compare
MPMX19_01978 +0.5 1.1 hypothetical protein compare
MPMX19_03504 +0.5 1.9 Sulfur carrier protein FdhD compare
MPMX19_04508 +0.5 2.4 Phosphoglycolate phosphatase compare
MPMX19_01479 +0.5 2.3 hypothetical protein compare
MPMX19_05762 +0.5 1.4 hypothetical protein compare
MPMX19_04095 +0.5 2.2 hypothetical protein compare
MPMX19_00423 +0.5 2.1 (E)-2-((N-methylformamido)methylene)succinate hydrolase compare
MPMX19_01616 +0.5 1.5 hypothetical protein compare
MPMX19_06012 +0.5 2.5 Transcriptional regulatory protein DegU compare
MPMX19_03434 +0.5 2.2 hypothetical protein compare
MPMX19_05011 +0.5 2.3 tRNA (cytidine(34)-2'-O)-methyltransferase compare
MPMX19_06327 +0.5 0.8 hypothetical protein compare
MPMX19_06187 +0.5 2.9 hypothetical protein compare
MPMX19_03450 +0.5 1.0 hypothetical protein compare
MPMX19_04620 +0.5 2.2 HTH-type transcriptional regulator CynR compare
MPMX19_06207 +0.5 2.1 hypothetical protein compare
MPMX19_00822 +0.5 2.7 Divalent metal cation transporter MntH compare
MPMX19_04262 +0.5 2.4 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_02089 +0.5 2.0 hypothetical protein compare
MPMX19_02749 +0.5 1.8 hypothetical protein compare
MPMX19_00839 +0.5 0.9 hypothetical protein compare
MPMX19_06765 +0.5 0.9 Hydrogen peroxide-inducible genes activator compare
MPMX19_00129 +0.4 1.1 hypothetical protein compare
MPMX19_01248 +0.4 2.4 hypothetical protein compare
MPMX19_04393 +0.4 1.5 hypothetical protein compare
MPMX19_05982 +0.4 1.9 hypothetical protein compare
MPMX19_01101 +0.4 1.2 hypothetical protein compare
MPMX19_02532 +0.4 1.5 Cytochrome c-type biogenesis protein CcmE compare
MPMX19_06488 +0.4 1.5 Taurine-binding periplasmic protein compare
MPMX19_06812 +0.4 2.4 hypothetical protein compare
MPMX19_05686 +0.4 1.4 Chemotaxis protein CheY compare
MPMX19_02499 +0.4 2.1 hypothetical protein compare
MPMX19_06911 +0.4 1.8 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_06534 +0.4 1.6 Putative amino-acid ABC transporter-binding protein YhdW compare
MPMX19_01190 +0.4 1.9 Response regulator receiver protein CpdR compare
MPMX19_05818 +0.4 1.2 hypothetical protein compare
MPMX19_05726 +0.4 1.2 hypothetical protein compare
MPMX19_03916 +0.4 1.0 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
MPMX19_00334 +0.4 1.4 hypothetical protein compare
MPMX19_02201 +0.4 2.7 hypothetical protein compare
MPMX19_05690 +0.4 3.0 Protein phosphotransferase ChpT compare
MPMX19_00266 +0.4 1.1 hypothetical protein compare
MPMX19_04025 +0.4 1.9 hypothetical protein compare
MPMX19_03396 +0.4 1.5 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_00718 +0.4 1.0 hypothetical protein compare
MPMX19_03126 +0.4 2.0 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase compare
MPMX19_03403 +0.4 2.6 Glutathione transport system permease protein GsiC compare
MPMX19_06924 +0.4 1.5 hypothetical protein compare
MPMX19_06514 +0.4 2.7 L-methionine gamma-lyase compare
MPMX19_05324 +0.4 2.9 hypothetical protein compare
MPMX19_05718 +0.4 2.7 hypothetical protein compare
MPMX19_01217 +0.4 1.7 Ribosomal RNA small subunit methyltransferase C compare
MPMX19_06378 +0.4 2.3 hypothetical protein compare
MPMX19_06896 +0.4 1.5 L-aspartate oxidase compare
MPMX19_00294 +0.4 1.5 Adaptive-response sensory-kinase SasA compare
MPMX19_01480 +0.4 2.0 hypothetical protein compare
MPMX19_05578 +0.4 2.5 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_03595 +0.4 2.6 C4-dicarboxylate transport protein 2 compare
MPMX19_03676 +0.4 1.9 hypothetical protein compare
MPMX19_06020 +0.4 2.0 hypothetical protein compare
MPMX19_03288 +0.4 2.8 Spermidine/putrescine import ATP-binding protein PotA compare
MPMX19_03275 +0.4 1.9 HTH-type transcriptional regulator PgrR compare
MPMX19_00976 +0.4 1.0 ATP-dependent RNA helicase RhlE compare
MPMX19_01349 +0.4 2.7 hypothetical protein compare
MPMX19_03039 +0.4 1.0 Cyclic AMP receptor protein compare
MPMX19_02761 +0.4 2.4 hypothetical protein compare
MPMX19_03561 +0.4 1.7 Propane 2-monooxygenase, effector component compare
MPMX19_05332 +0.4 2.1 HTH-type transcriptional regulator GntR compare
MPMX19_04088 +0.4 1.8 Signal recognition particle 54 kDa protein compare
MPMX19_02034 +0.4 1.7 Peptidoglycan-associated lipoprotein compare
MPMX19_03667 +0.4 1.9 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_04246 +0.4 1.6 hypothetical protein compare
MPMX19_04558 +0.4 2.7 hypothetical protein compare
MPMX19_06506 +0.4 1.3 hypothetical protein compare
MPMX19_06042 +0.4 1.8 hypothetical protein compare
MPMX19_03864 +0.4 2.0 Glycine cleavage system transcriptional activator compare
MPMX19_05622 +0.4 2.8 Sensor histidine kinase RegB compare
MPMX19_04693 +0.4 1.5 hypothetical protein compare
MPMX19_05621 +0.4 2.1 ABC transporter ATP-binding protein NatA compare
MPMX19_06815 +0.4 1.4 hypothetical protein compare
MPMX19_01860 +0.4 1.9 hypothetical protein compare
MPMX19_05034 +0.4 1.4 ATP synthase subunit c compare
MPMX19_04680 +0.4 1.0 Inner membrane ABC transporter permease protein YdcV compare
MPMX19_01482 +0.4 2.7 hypothetical protein compare
MPMX19_01073 +0.4 1.4 5'-nucleotidase compare
MPMX19_04609 +0.4 1.9 Putative short-chain type dehydrogenase/reductase compare
MPMX19_05215 +0.4 1.6 hypothetical protein compare
MPMX19_03715 +0.4 1.7 Response regulator ArlR compare
MPMX19_03800 +0.4 1.0 hypothetical protein compare
MPMX19_03972 +0.4 1.3 Enolase compare
MPMX19_01703 +0.4 0.6 hypothetical protein compare
MPMX19_06979 +0.4 1.2 hypothetical protein compare
MPMX19_03617 +0.4 1.4 hypothetical protein compare
MPMX19_05860 +0.4 2.2 3-oxoadipate enol-lactonase 2 compare
MPMX19_06791 +0.4 1.4 Leucine-responsive regulatory protein compare
MPMX19_02105 +0.4 1.0 hypothetical protein compare
MPMX19_00472 +0.4 1.1 Protein HesB, heterocyst compare
MPMX19_06463 +0.4 2.0 Hydroxycarboxylate dehydrogenase B compare
MPMX19_03097 +0.4 1.9 hypothetical protein compare
MPMX19_00887 +0.4 0.9 hypothetical protein compare
MPMX19_06495 +0.3 1.9 hypothetical protein compare
MPMX19_00268 +0.3 0.9 Transcriptional regulatory protein OmpR compare
MPMX19_03545 +0.3 1.3 Ectoine hydrolase compare
MPMX19_04362 +0.3 0.9 Cytidine deaminase compare
MPMX19_04286 +0.3 2.1 hypothetical protein compare
MPMX19_05528 +0.3 1.6 hypothetical protein compare
MPMX19_03111 +0.3 2.2 Putative fatty-acid--CoA ligase FadD21 compare
MPMX19_06886 +0.3 1.9 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_03959 +0.3 0.8 hypothetical protein compare
MPMX19_00517 +0.3 1.6 HTH-type transcriptional activator AmpR compare
MPMX19_04154 +0.3 1.4 hypothetical protein compare
MPMX19_04990 +0.3 1.1 Hydrogen peroxide-inducible genes activator compare
MPMX19_06422 +0.3 1.5 hypothetical protein compare
MPMX19_03114 +0.3 1.2 hypothetical protein compare
MPMX19_01274 +0.3 1.7 hypothetical protein compare
MPMX19_04653 +0.3 2.1 Fumarate reductase flavoprotein subunit compare
MPMX19_01725 +0.3 1.7 hypothetical protein compare
MPMX19_02511 +0.3 0.7 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase compare
MPMX19_00515 +0.3 2.5 hypothetical protein compare
MPMX19_03102 +0.3 2.0 hypothetical protein compare
MPMX19_03558 +0.3 1.3 hypothetical protein compare
MPMX19_00319 +0.3 0.7 hypothetical protein compare
MPMX19_06809 +0.3 2.0 Glutathione-regulated potassium-efflux system ancillary protein KefF compare
MPMX19_03129 +0.3 2.1 Citrate/malate transporter compare
MPMX19_06390 +0.3 1.6 hypothetical protein compare
MPMX19_02816 +0.3 0.9 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_05592 +0.3 2.0 Glycine cleavage system transcriptional activator compare
MPMX19_02116 +0.3 1.1 Cold shock protein CspA compare
MPMX19_02604 +0.3 1.6 Mycothiol acetyltransferase compare
MPMX19_00825 +0.3 1.8 hypothetical protein compare
MPMX19_03033 +0.3 2.1 hypothetical protein compare
MPMX19_01621 +0.3 1.8 hypothetical protein compare
MPMX19_02286 +0.3 1.4 hypothetical protein compare
MPMX19_02181 +0.3 1.5 hypothetical protein compare
MPMX19_02918 +0.3 1.8 NAD(P)-dependent methylenetetrahydromethanopterin dehydrogenase compare
MPMX19_00543 +0.3 1.1 Molybdenum cofactor guanylyltransferase compare
MPMX19_04669 +0.3 1.0 Glucose 1-dehydrogenase compare
MPMX19_02647 +0.3 2.3 hypothetical protein compare
MPMX19_06500 +0.3 2.3 hypothetical protein compare
MPMX19_00085 +0.3 1.3 hypothetical protein compare
MPMX19_06880 +0.3 1.0 Validamycin A dioxygenase compare
MPMX19_05065 +0.3 0.9 Farnesyl diphosphate synthase compare
MPMX19_03001 +0.3 1.0 Ribulokinase compare
MPMX19_05459 +0.3 0.7 hypothetical protein compare
MPMX19_06898 +0.3 2.1 FAD-dependent urate hydroxylase compare
MPMX19_02091 +0.3 1.6 hypothetical protein compare
MPMX19_05131 +0.3 2.2 hypothetical protein compare
MPMX19_03308 +0.3 1.0 hypothetical protein compare
MPMX19_03084 +0.3 2.1 Catalase-peroxidase compare
MPMX19_04192 +0.3 1.7 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
MPMX19_03621 +0.3 1.8 N-acetylglucosamine repressor compare
MPMX19_01955 +0.3 0.6 Putative anti-sigma factor antagonist compare
MPMX19_05024 +0.3 2.2 Cytochrome bd-II ubiquinol oxidase subunit 1 compare
MPMX19_04051 +0.3 1.3 Alcohol dehydrogenase compare
MPMX19_06099 +0.3 2.4 hypothetical protein compare
MPMX19_06955 +0.3 2.0 High-affinity branched-chain amino acid transport system permease protein LivH compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm; spin-x control experiments