Experiment set1S571 for Paraburkholderia sabiae LMG 24235

Compare to:

Motility_inner_sample

200 most important genes:

  gene name fitness t score description  
QEN71_RS28850 -4.8 -9.8 flagellar biosynthesis protein FliQ compare
QEN71_RS22490 -4.6 -3.2 50S ribosomal protein L9 compare
QEN71_RS28820 -4.6 -8.3 flagellar hook-length control protein FliK compare
QEN71_RS28910 -4.6 -5.5 flagellar hook assembly protein FlgD compare
QEN71_RS14065 -4.4 -3.0 hypothetical protein compare
QEN71_RS28860 -4.4 -17.4 flagellar hook-associated protein FlgL compare
QEN71_RS21425 -4.3 -9.2 HAMP domain-containing sensor histidine kinase compare
QEN71_RS29010 -4.3 -15.9 chemotaxis protein CheA compare
QEN71_RS28805 -4.2 -8.0 flagellar assembly protein FliH compare
QEN71_RS15185 -4.2 -22.4 RNA polymerase sigma factor RpoD compare
QEN71_RS28855 -4.0 -16.7 flagellar biosynthetic protein FliR compare
QEN71_RS28955 -4.0 -9.6 flagellar biosynthesis protein FlhA compare
QEN71_RS28995 -3.9 -15.1 CheR family methyltransferase compare
QEN71_RS28865 -3.9 -20.9 flagellar hook-associated protein FlgK compare
QEN71_RS28980 -3.9 -7.8 chemotaxis response regulator CheY compare
QEN71_RS28985 -3.9 -15.9 chemotaxis response regulator protein-glutamate methylesterase compare
QEN71_RS29005 -3.8 -10.4 chemotaxis protein CheW compare
QEN71_RS37145 -3.8 -3.4 TetR family transcriptional regulator compare
QEN71_RS28795 -3.8 -26.0 flagellar basal-body MS-ring/collar protein FliF compare
QEN71_RS22025 -3.8 -11.0 hypothetical protein compare
QEN71_RS28785 -3.8 -18.4 flagellar export chaperone FliS compare
QEN71_RS28905 -3.8 -9.4 flagellar hook protein FlgE compare
QEN71_RS28880 -3.7 -5.6 flagellar assembly peptidoglycan hydrolase FlgJ compare
QEN71_RS00180 -3.7 -4.4 DUF4390 domain-containing protein compare
QEN71_RS01745 -3.7 -5.6 PTS sugar transporter subunit IIA compare
QEN71_RS28815 -3.6 -10.1 flagellar export protein FliJ compare
QEN71_RS17600 -3.6 -15.3 citrate synthase compare
QEN71_RS28900 -3.6 -2.5 flagellar basal-body rod protein FlgF compare
QEN71_RS28890 -3.6 -6.4 flagellar basal body L-ring protein FlgH compare
QEN71_RS26480 -3.6 -2.5 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
QEN71_RS27190 -3.6 -4.9 carbohydrate kinase family protein compare
QEN71_RS05840 -3.6 -2.4 regulator compare
QEN71_RS28800 -3.6 -12.5 flagellar motor switch protein FliG compare
QEN71_RS29035 -3.5 -16.1 flagellar transcriptional regulator FlhD compare
QEN71_RS28830 -3.5 -17.0 flagellar motor switch protein FliM compare
QEN71_RS28915 -3.5 -5.3 flagellar basal body rod protein FlgC compare
QEN71_RS28845 -3.4 -10.1 flagellar type III secretion system pore protein FliP compare
QEN71_RS28810 -3.4 -10.3 flagellar protein export ATPase FliI compare
QEN71_RS02440 -3.4 -4.7 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
QEN71_RS28925 -3.3 -6.7 flagellar basal body P-ring formation chaperone FlgA compare
QEN71_RS28960 -3.3 -10.8 flagellar biosynthesis protein FlhB compare
QEN71_RS28935 -3.3 -8.2 flagellar protein FlgN compare
QEN71_RS27900 -3.3 -3.9 ABC transporter substrate-binding protein compare
QEN71_RS29090 -3.3 -4.1 flagellin domain-containing protein compare
QEN71_RS28950 -3.2 -9.9 flagellar biosynthesis protein FlhF compare
QEN71_RS26780 -3.2 -2.2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
QEN71_RS27005 -3.2 -8.8 type I glyceraldehyde-3-phosphate dehydrogenase compare
QEN71_RS29025 -3.2 -15.2 flagellar motor stator protein MotA compare
QEN71_RS28825 -3.2 -11.7 flagellar basal body-associated protein FliL compare
QEN71_RS28840 -3.2 -11.0 flagellar biosynthetic protein FliO compare
QEN71_RS28990 -3.2 -5.9 chemoreceptor glutamine deamidase CheD compare
QEN71_RS28885 -3.2 -4.3 flagellar basal body P-ring protein FlgI compare
QEN71_RS25420 -3.2 -6.7 oligosaccharide flippase family protein compare
QEN71_RS21975 -3.2 -8.8 endopeptidase La compare
QEN71_RS28940 -3.2 -4.3 RNA polymerase sigma factor FliA compare
QEN71_RS06190 -3.1 -2.1 C40 family peptidase compare
QEN71_RS27895 -3.1 -2.1 STAS domain-containing protein compare
QEN71_RS27785 -3.1 -2.1 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
QEN71_RS25710 -3.1 -5.9 GNAT family N-acetyltransferase compare
QEN71_RS17630 -3.1 -10.6 FimV/HubP family polar landmark protein compare
QEN71_RS25730 -3.1 -6.1 ABC transporter permease compare
QEN71_RS06505 -3.1 -8.7 phosphoenolpyruvate synthase compare
QEN71_RS07820 -3.1 -6.5 cytochrome d ubiquinol oxidase subunit II compare
QEN71_RS25690 -3.0 -3.5 glycosyltransferase family 4 protein compare
QEN71_RS28065 -3.0 -2.0 penicillin-binding protein 1A compare
QEN71_RS22015 -2.9 -10.1 squalene/phytoene synthase family protein compare
QEN71_RS28895 -2.9 -3.9 flagellar basal-body rod protein FlgG compare
QEN71_RS27675 -2.9 -3.4 peptide chain release factor N(5)-glutamine methyltransferase compare
QEN71_RS29020 -2.9 -8.2 flagellar motor protein MotB compare
QEN71_RS00505 -2.9 -15.1 response regulator transcription factor RqpR compare
QEN71_RS27920 -2.9 -2.8 ABC transporter ATP-binding protein compare
QEN71_RS15805 -2.9 -6.5 cyclic peptide export ABC transporter compare
QEN71_RS25630 -2.8 -4.3 NAD-dependent epimerase/dehydratase family protein compare
QEN71_RS03260 -2.8 -3.8 UbiD family decarboxylase compare
QEN71_RS25700 -2.8 -3.8 DegT/DnrJ/EryC1/StrS family aminotransferase compare
QEN71_RS15190 -2.7 -4.3 hypothetical protein compare
QEN71_RS07825 -2.7 -15.1 cytochrome ubiquinol oxidase subunit I compare
QEN71_RS17650 -2.7 -3.7 site-specific DNA-methyltransferase compare
QEN71_RS26950 -2.7 -1.9 LPS assembly lipoprotein LptE compare
QEN71_RS28105 -2.7 -1.8 c-type cytochrome compare
QEN71_RS24090 -2.7 -13.0 NADH-quinone oxidoreductase subunit M compare
QEN71_RS25715 -2.7 -5.1 acetyltransferase compare
QEN71_RS16440 -2.7 -3.1 presqualene diphosphate synthase HpnD compare
QEN71_RS26855 -2.7 -1.8 dihydroorotase compare
QEN71_RS28975 -2.6 -10.9 protein phosphatase CheZ compare
QEN71_RS28920 -2.6 -2.0 flagellar basal body rod protein FlgB compare
QEN71_RS22510 -2.6 -4.6 anti-sigma factor compare
QEN71_RS06310 -2.6 -1.8 lysophospholipid transporter LplT compare
QEN71_RS26275 -2.6 -4.9 tol-pal system protein YbgF compare
QEN71_RS02350 -2.5 -18.2 ADP-forming succinate--CoA ligase subunit beta compare
QEN71_RS02425 -2.5 -2.2 phosphoglycerate kinase compare
QEN71_RS25720 -2.4 -5.2 SAM-dependent methyltransferase compare
QEN71_RS02355 -2.4 -15.4 succinate--CoA ligase subunit alpha compare
QEN71_RS00185 -2.4 -7.8 PAS domain-containing sensor histidine kinase compare
QEN71_RS03785 -2.4 -6.5 aminopeptidase N compare
QEN71_RS20120 -2.4 -14.8 flagellar transcriptional regulator FlhC compare
QEN71_RS28095 -2.4 -4.1 c-type cytochrome biogenesis protein CcsB compare
QEN71_RS01060 -2.4 -16.7 hydroxymethylglutaryl-CoA lyase compare
QEN71_RS21935 -2.4 -6.0 glucose-6-phosphate isomerase compare
QEN71_RS24400 -2.4 -7.4 phosphoribosylamine--glycine ligase compare
QEN71_RS27915 -2.3 -3.5 lipid asymmetry maintenance ABC transporter permease subunit MlaE compare
QEN71_RS26895 -2.3 -6.2 LysR substrate-binding domain-containing protein compare
QEN71_RS17085 -2.3 -13.3 PAS domain-containing methyl-accepting chemotaxis protein compare
QEN71_RS25725 -2.3 -10.9 ABC transporter ATP-binding protein compare
QEN71_RS27685 -2.3 -3.0 UbiX family flavin prenyltransferase compare
QEN71_RS12045 -2.2 -2.6 5-carboxymethyl-2-hydroxymuconate Delta-isomerase compare
QEN71_RS01820 -2.2 -13.3 AI-2E family transporter compare
QEN71_RS25705 -2.2 -3.0 FdtA/QdtA family cupin domain-containing protein compare
QEN71_RS02345 -2.2 -6.9 DUF2889 domain-containing protein compare
QEN71_RS20125 -2.2 -8.1 flagellar transcriptional regulator FlhD compare
QEN71_RS36740 -2.2 -1.5 lytic transglycosylase domain-containing protein compare
QEN71_RS25695 -2.2 -8.6 glycosyltransferase family 4 protein compare
QEN71_RS04725 -2.1 -15.1 glycosyltransferase family 4 protein compare
QEN71_RS24160 -2.1 -4.3 preprotein translocase subunit SecG compare
QEN71_RS28930 -2.1 -5.7 flagellar biosynthesis anti-sigma factor FlgM compare
QEN71_RS24565 -2.1 -4.0 DUF1841 family protein compare
QEN71_RS24830 -2.1 -5.6 ABC transporter permease subunit compare
QEN71_RS03520 -2.1 -7.4 septum site-determining protein MinD compare
QEN71_RS01445 -2.1 -6.1 2,3-diphosphoglycerate-dependent phosphoglycerate mutase compare
QEN71_RS08645 -2.0 -2.5 GTP cyclohydrolase II compare
QEN71_RS40875 -2.0 -1.5 hypothetical protein compare
QEN71_RS22330 -2.0 -3.0 glycosyltransferase family 39 protein compare
QEN71_RS38745 -2.0 -1.9 SDR family oxidoreductase compare
QEN71_RS42215 -2.0 -2.7 4Fe-4S dicluster domain-containing protein compare
QEN71_RS17575 -2.0 -2.1 succinate dehydrogenase, cytochrome b556 subunit compare
QEN71_RS02265 -2.0 -9.6 DEAD/DEAH box helicase compare
QEN71_RS03930 -2.0 -10.5 disulfide bond formation protein B compare
QEN71_RS31990 -2.0 -1.8 cupin domain-containing protein compare
QEN71_RS28070 -1.9 -5.3 iron donor protein CyaY compare
QEN71_RS30990 -1.9 -2.0 hypothetical protein compare
QEN71_RS29135 -1.9 -8.0 glycosyltransferase compare
QEN71_RS28945 -1.8 -5.1 AAA family ATPase compare
QEN71_RS00360 -1.8 -4.3 DUF484 family protein compare
QEN71_RS17470 -1.8 -2.0 hypothetical protein compare
QEN71_RS24465 -1.8 -6.0 glycosyltransferase family 2 protein compare
QEN71_RS16400 -1.8 -9.3 adenosyl-hopene transferase HpnH compare
QEN71_RS27600 -1.8 -5.1 redox-regulated ATPase YchF compare
QEN71_RS17140 -1.8 -1.2 hypothetical protein compare
QEN71_RS02450 -1.8 -3.1 5-(carboxyamino)imidazole ribonucleotide synthase compare
QEN71_RS23370 -1.8 -3.4 arginine/ornithine succinyltransferase subunit alpha compare
QEN71_RS16430 -1.7 -13.2 squalene--hopene cyclase compare
QEN71_RS24825 -1.7 -3.9 nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein compare
QEN71_RS27795 -1.7 -5.7 Do family serine endopeptidase compare
QEN71_RS32200 -1.7 -6.5 MarR family transcriptional regulator compare
QEN71_RS04585 -1.7 -9.0 MucB/RseB C-terminal domain-containing protein compare
QEN71_RS23045 -1.7 -9.3 cell division protein ZapE compare
QEN71_RS04835 -1.7 -3.6 phosphate ABC transporter ATP-binding protein PstB compare
QEN71_RS05720 -1.7 -14.1 oxygen sensor histidine kinase FixL compare
QEN71_RS36090 -1.7 -1.4 hypothetical protein compare
QEN71_RS23945 -1.6 -2.7 5S ribosomal RNA compare
QEN71_RS40660 -1.6 -4.3 hypothetical protein compare
QEN71_RS15225 -1.6 -5.4 GTP cyclohydrolase FolE2 compare
QEN71_RS17570 -1.6 -5.8 GntR family transcriptional regulator compare
QEN71_RS22425 -1.6 -8.3 SMR family transporter compare
QEN71_RS24430 -1.6 -6.1 ribonuclease G compare
QEN71_RS22400 -1.6 -7.6 threonine synthase compare
QEN71_RS33070 -1.6 -1.7 YMGG-like glycine zipper-containing protein compare
QEN71_RS42235 -1.6 -1.4 nitrogenase stabilizing/protective protein NifW compare
QEN71_RS21000 -1.6 -1.5 DUF4148 domain-containing protein compare
QEN71_RS01440 -1.6 -4.3 S41 family peptidase compare
QEN71_RS01165 -1.6 -6.5 thiol:disulfide interchange protein DsbA/DsbL compare
QEN71_RS22190 -1.6 -8.6 polyhydroxyalkanoate synthesis repressor PhaR compare
QEN71_RS35025 -1.5 -8.0 efflux RND transporter permease subunit compare
QEN71_RS12935 -1.5 -3.1 glutamine synthetase family protein compare
QEN71_RS20705 -1.5 -3.4 LysR family transcriptional regulator compare
QEN71_RS36495 -1.5 -2.2 ornithine cyclodeaminase compare
QEN71_RS29495 -1.5 -2.6 HU family DNA-binding protein compare
QEN71_RS05450 -1.5 -1.9 outer membrane protein assembly factor BamC compare
QEN71_RS02150 -1.5 -3.2 lysophospholipid acyltransferase family protein compare
QEN71_RS37615 -1.5 -1.3 DoxX family protein compare
QEN71_RS16425 -1.5 -3.7 phosphorylase compare
QEN71_RS38720 -1.5 -1.4 DUF1987 domain-containing protein compare
QEN71_RS07090 -1.5 -6.3 ABC-F family ATPase compare
QEN71_RS21065 -1.4 -1.3 sigma factor-like helix-turn-helix DNA-binding protein compare
QEN71_RS04720 -1.4 -9.0 ABC transporter ATP-binding protein compare
QEN71_RS03970 -1.4 -3.4 tetratricopeptide repeat protein compare
QEN71_RS03515 -1.4 -3.2 septum site-determining protein MinC compare
QEN71_RS38570 -1.4 -1.4 TetR/AcrR family transcriptional regulator compare
QEN71_RS24555 -1.4 -3.3 electron transport complex subunit RsxB compare
QEN71_RS22415 -1.4 -7.8 Mth938-like domain-containing protein compare
QEN71_RS25425 -1.4 -3.5 glycosyltransferase compare
QEN71_RS37540 -1.4 -3.7 AraC family transcriptional regulator compare
QEN71_RS10610 -1.3 -1.7 nuclear transport factor 2 family protein compare
QEN71_RS17635 -1.3 -6.4 tRNA pseudouridine(38-40) synthase TruA compare
QEN71_RS29130 -1.3 -6.6 tetratricopeptide repeat protein compare
QEN71_RS24745 -1.3 -1.1 hypothetical protein compare
QEN71_RS29450 -1.3 -4.4 SET domain-containing protein-lysine N-methyltransferase compare
QEN71_RS18300 -1.3 -1.6 MarR family winged helix-turn-helix transcriptional regulator compare
QEN71_RS41030 -1.3 -2.4 XRE family transcriptional regulator compare
QEN71_RS31390 -1.3 -2.9 FadR/GntR family transcriptional regulator compare
QEN71_RS26640 -1.3 -5.7 tRNA guanosine(34) transglycosylase Tgt compare
QEN71_RS33030 -1.3 -1.4 hypothetical protein compare
QEN71_RS16775 -1.3 -4.3 chemotaxis protein CheB compare
QEN71_RS32570 -1.3 -1.9 NIPSNAP family protein compare
QEN71_RS43315 -1.3 -4.2 helix-turn-helix transcriptional regulator compare
QEN71_RS26230 -1.3 -3.6 transcriptional regulator NrdR compare
QEN71_RS25205 -1.3 -3.0 leucyl aminopeptidase compare
QEN71_RS21955 -1.3 -6.5 SurA N-terminal domain-containing protein compare
QEN71_RS36920 -1.3 -1.8 universal stress protein compare
QEN71_RS02515 -1.3 -4.9 TetR family transcriptional regulator compare


Specific Phenotypes

None in this experiment

For Paraburkholderia sabiae LMG 24235 in motility experiments