Experiment set1S57 for Azospirillum sp. SherDot2

Compare to:

NL-CCM; spin-x control

200 most detrimental genes:

  gene name fitness t score description  
MPMX19_06197 +1.7 4.7 hypothetical protein compare
MPMX19_02251 +1.0 2.4 hypothetical protein compare
MPMX19_05762 +1.0 2.7 hypothetical protein compare
MPMX19_05906 +0.9 2.2 hypothetical protein compare
MPMX19_03866 +0.9 2.4 Ribose import permease protein RbsC compare
MPMX19_05586 +0.9 2.1 hypothetical protein compare
MPMX19_02778 +0.9 3.5 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_03123 +0.8 2.4 Citrate lyase acyl carrier protein compare
MPMX19_05207 +0.8 1.9 Hemolysin secretion protein D, plasmid compare
MPMX19_02806 +0.8 3.2 HTH-type transcriptional regulator DmlR compare
MPMX19_04726 +0.8 2.9 Glycine betaine/choline transport system permease protein OusW compare
MPMX19_05096 +0.8 2.9 L-cystine import ATP-binding protein TcyC compare
MPMX19_04638 +0.8 2.7 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_04680 +0.8 2.3 Inner membrane ABC transporter permease protein YdcV compare
MPMX19_03846 +0.8 2.4 hypothetical protein compare
MPMX19_06381 +0.7 1.6 putative manganese efflux pump MntP compare
MPMX19_02811 +0.7 3.1 Long-chain-alcohol dehydrogenase 1 compare
MPMX19_00142 +0.7 1.1 hypothetical protein compare
MPMX19_00335 +0.7 1.6 Magnesium transport protein CorA compare
MPMX19_00212 +0.7 5.5 Nitrogen fixation regulation protein FixK compare
MPMX19_06395 +0.6 1.7 Inner membrane protein YqaA compare
MPMX19_00423 +0.6 2.7 (E)-2-((N-methylformamido)methylene)succinate hydrolase compare
MPMX19_02084 +0.6 1.8 hypothetical protein compare
MPMX19_06520 +0.6 2.0 Nitrate import ATP-binding protein NrtC compare
MPMX19_06853 +0.6 2.3 Glyoxylate/hydroxypyruvate reductase A compare
MPMX19_06309 +0.6 2.5 hypothetical protein compare
MPMX19_00268 +0.6 1.3 Transcriptional regulatory protein OmpR compare
MPMX19_06896 +0.6 2.5 L-aspartate oxidase compare
MPMX19_03900 +0.6 2.8 Hca operon transcriptional activator HcaR compare
MPMX19_03939 +0.6 1.6 Enoyl-CoA-hydratase compare
MPMX19_06979 +0.6 2.1 hypothetical protein compare
MPMX19_04120 +0.6 2.1 hypothetical protein compare
MPMX19_04202 +0.6 2.8 Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system compare
MPMX19_04700 +0.6 2.1 Adaptive-response sensory-kinase SasA compare
MPMX19_03629 +0.6 2.7 hypothetical protein compare
MPMX19_01487 +0.6 1.8 hypothetical protein compare
MPMX19_04560 +0.6 1.7 hypothetical protein compare
MPMX19_04161 +0.6 1.5 hypothetical protein compare
MPMX19_03655 +0.6 1.6 hypothetical protein compare
MPMX19_06763 +0.6 2.1 hypothetical protein compare
MPMX19_00208 +0.6 1.2 hypothetical protein compare
MPMX19_03728 +0.6 1.0 hypothetical protein compare
MPMX19_05176 +0.6 1.0 4-hydroxy-3-prenylphenylpyruvate oxygenase/4-hydroxy-3-prenylbenzoate synthase compare
MPMX19_02787 +0.6 2.6 (R)-benzylsuccinyl-CoA dehydrogenase compare
MPMX19_02875 +0.6 2.3 hypothetical protein compare
MPMX19_05362 +0.6 1.3 hypothetical protein compare
MPMX19_06272 +0.6 0.9 hypothetical protein compare
MPMX19_03169 +0.5 1.4 Dihydroanticapsin 7-dehydrogenase compare
MPMX19_05652 +0.5 1.5 hypothetical protein compare
MPMX19_05205 +0.5 2.5 hypothetical protein compare
MPMX19_00129 +0.5 1.2 hypothetical protein compare
MPMX19_06519 +0.5 1.3 HTH-type transcriptional repressor NagR compare
MPMX19_03093 +0.5 1.9 Manganese import ATP-binding protein ScaC compare
MPMX19_06456 +0.5 1.1 hypothetical protein compare
MPMX19_02909 +0.5 2.2 Cytochrome c oxidase subunit 3 compare
MPMX19_03897 +0.5 1.2 hypothetical protein compare
MPMX19_01482 +0.5 3.9 hypothetical protein compare
MPMX19_03375 +0.5 2.6 Outer membrane protein TolC compare
MPMX19_06518 +0.5 2.4 Methionine import system permease protein MetP compare
MPMX19_05622 +0.5 4.0 Sensor histidine kinase RegB compare
MPMX19_04863 +0.5 1.3 Transcriptional regulatory protein LnrK compare
MPMX19_05104 +0.5 1.0 hypothetical protein compare
MPMX19_00577 +0.5 2.5 Ribosomal RNA small subunit methyltransferase E compare
MPMX19_01864 +0.5 1.2 Regulatory protein AtoC compare
MPMX19_06379 +0.5 1.9 hypothetical protein compare
MPMX19_04682 +0.5 1.2 hypothetical protein compare
MPMX19_03741 +0.5 1.0 hypothetical protein compare
MPMX19_04099 +0.5 2.0 Chemotaxis protein CheY compare
MPMX19_03353 +0.5 2.2 hypothetical protein compare
MPMX19_03549 +0.5 1.6 HTH-type transcriptional regulator PgrR compare
MPMX19_04743 +0.5 1.8 Formyltransferase/hydrolase complex subunit D compare
MPMX19_04669 +0.5 1.7 Glucose 1-dehydrogenase compare
MPMX19_04246 +0.5 1.8 hypothetical protein compare
MPMX19_04636 +0.5 1.7 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_05690 +0.5 3.0 Protein phosphotransferase ChpT compare
MPMX19_03472 +0.5 1.7 Fatty acid metabolism regulator protein compare
MPMX19_04693 +0.5 2.7 hypothetical protein compare
MPMX19_03868 +0.5 2.2 Xylitol-binding protein compare
MPMX19_06539 +0.5 1.2 hypothetical protein compare
MPMX19_04095 +0.5 2.1 hypothetical protein compare
MPMX19_03262 +0.5 1.6 putative HTH-type transcriptional repressor ExuR compare
MPMX19_05047 +0.5 2.4 Glycine cleavage system transcriptional activator compare
MPMX19_03948 +0.5 1.1 tRNA-Ser compare
MPMX19_02866 +0.5 1.8 4-hydroxymandelate oxidase compare
MPMX19_03699 +0.4 1.3 Maltose/maltodextrin import ATP-binding protein MalK compare
MPMX19_03707 +0.4 1.4 L-cystine import ATP-binding protein TcyC compare
MPMX19_01480 +0.4 2.6 hypothetical protein compare
MPMX19_06498 +0.4 1.6 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_05597 +0.4 2.5 hypothetical protein compare
MPMX19_06099 +0.4 3.4 hypothetical protein compare
MPMX19_06484 +0.4 2.5 hypothetical protein compare
MPMX19_06908 +0.4 2.7 Leu/Ile/Val-binding protein compare
MPMX19_03972 +0.4 2.0 Enolase compare
MPMX19_06464 +0.4 1.5 Tryptophan synthase beta chain compare
MPMX19_02757 +0.4 2.2 Glutathione transport system permease protein GsiD compare
MPMX19_01939 +0.4 1.9 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
MPMX19_01479 +0.4 2.6 hypothetical protein compare
MPMX19_04054 +0.4 2.8 Adaptive-response sensory-kinase SasA compare
MPMX19_05773 +0.4 1.5 Putative 1,2-phenylacetyl-CoA epoxidase, subunit D compare
MPMX19_02937 +0.4 1.0 hypothetical protein compare
MPMX19_04518 +0.4 1.9 Acetyl-CoA:oxalate CoA-transferase compare
MPMX19_03462 +0.4 1.6 Acetate CoA-transferase subunit alpha compare
MPMX19_03710 +0.4 2.0 Glycine cleavage system transcriptional activator compare
MPMX19_05203 +0.4 1.3 hypothetical protein compare
MPMX19_05834 +0.4 1.1 Hydrogen peroxide-inducible genes activator compare
MPMX19_04569 +0.4 2.2 Anti-sigma-F factor NrsF compare
MPMX19_05621 +0.4 2.2 ABC transporter ATP-binding protein NatA compare
MPMX19_03908 +0.4 2.7 hypothetical protein compare
MPMX19_02034 +0.4 1.8 Peptidoglycan-associated lipoprotein compare
MPMX19_02832 +0.4 2.5 putative cystine transporter YijE compare
MPMX19_05181 +0.4 1.1 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_06042 +0.4 2.6 hypothetical protein compare
MPMX19_02524 +0.4 3.3 tRNA pseudouridine synthase B compare
MPMX19_04497 +0.4 2.7 hypothetical protein compare
MPMX19_06396 +0.4 2.2 hypothetical protein compare
MPMX19_04610 +0.4 1.0 putative enoyl-CoA hydratase 1 compare
MPMX19_04755 +0.4 2.2 Ureidoglycolate lyase compare
MPMX19_06911 +0.4 1.5 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_00211 +0.4 1.5 putative copper-importing P-type ATPase A compare
MPMX19_02860 +0.4 1.4 hypothetical protein compare
MPMX19_02748 +0.4 1.9 L-lactate dehydrogenase compare
MPMX19_02874 +0.4 1.9 HTH-type transcriptional regulator SutR compare
MPMX19_02829 +0.4 2.4 2-dehydropantoate 2-reductase compare
MPMX19_01565 +0.4 0.9 hypothetical protein compare
MPMX19_01448 +0.4 1.4 hypothetical protein compare
MPMX19_06646 +0.4 2.0 hypothetical protein compare
MPMX19_02876 +0.4 1.7 hypothetical protein compare
MPMX19_02298 +0.4 1.2 hypothetical protein compare
MPMX19_03102 +0.4 2.4 hypothetical protein compare
MPMX19_00074 +0.4 0.9 Electron transfer flavoprotein subunit beta compare
MPMX19_05558 +0.4 2.3 Chemotaxis protein CheY compare
MPMX19_04724 +0.4 1.8 hypothetical protein compare
MPMX19_02198 +0.4 1.6 hypothetical protein compare
MPMX19_01274 +0.4 1.8 hypothetical protein compare
MPMX19_03085 +0.4 1.2 Hydrogen peroxide-inducible genes activator compare
MPMX19_06808 +0.4 0.9 HTH-type transcriptional regulator DmlR compare
MPMX19_06263 +0.4 1.5 hypothetical protein compare
MPMX19_05685 +0.4 2.7 Protein-glutamate methylesterase/protein-glutamine glutaminase 2 compare
MPMX19_01093 +0.4 2.5 Molybdate-binding protein ModA compare
MPMX19_03601 +0.4 1.7 Hydantoin racemase compare
MPMX19_02815 +0.4 1.1 2-keto-4-pentenoate hydratase compare
MPMX19_00318 +0.4 2.0 hypothetical protein compare
MPMX19_06924 +0.4 1.6 hypothetical protein compare
MPMX19_06967 +0.4 0.7 hypothetical protein compare
MPMX19_01792 +0.4 1.8 Putative HTH-type transcriptional regulator YhjB compare
MPMX19_00878 +0.4 1.9 Guanidinium exporter compare
MPMX19_03026 +0.4 1.2 Fructose import ATP-binding protein FrcA compare
MPMX19_04635 +0.4 1.7 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_04025 +0.4 1.4 hypothetical protein compare
MPMX19_03667 +0.4 1.6 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_01729 +0.4 0.8 Ethylmalonyl-CoA/methylmalonyl-CoA epimerase compare
MPMX19_04056 +0.4 2.5 Aldehyde oxidoreductase molybdenum-binding subunit PaoC compare
MPMX19_03825 +0.4 0.6 IS5 family transposase IS4811 compare
MPMX19_04540 +0.4 2.2 hypothetical protein compare
MPMX19_02057 +0.4 1.4 hypothetical protein compare
MPMX19_03509 +0.4 1.1 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic compare
MPMX19_00112 +0.4 1.5 Multidrug transporter EmrE compare
MPMX19_03306 +0.4 1.6 hypothetical protein compare
MPMX19_03934 +0.4 1.2 hypothetical protein compare
MPMX19_03097 +0.4 2.1 hypothetical protein compare
MPMX19_02248 +0.4 1.6 hypothetical protein compare
MPMX19_02181 +0.4 1.4 hypothetical protein compare
MPMX19_05575 +0.4 1.2 hypothetical protein compare
MPMX19_01141 +0.4 1.8 hypothetical protein compare
MPMX19_04477 +0.4 1.1 hypothetical protein compare
MPMX19_04783 +0.4 2.1 Ubiquinone biosynthesis O-methyltransferase, mitochondrial compare
MPMX19_06179 +0.4 0.7 putative SURF1-like protein compare
MPMX19_00362 +0.3 1.4 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_01590 +0.3 2.1 Gamma-glutamyl-hercynylcysteine sulfoxide hydrolase compare
MPMX19_05026 +0.3 2.4 hypothetical protein compare
MPMX19_05332 +0.3 2.1 HTH-type transcriptional regulator GntR compare
MPMX19_03933 +0.3 1.4 hypothetical protein compare
MPMX19_03803 +0.3 1.1 hypothetical protein compare
MPMX19_05903 +0.3 2.1 hypothetical protein compare
MPMX19_05559 +0.3 1.7 hypothetical protein compare
MPMX19_04877 +0.3 2.3 hypothetical protein compare
MPMX19_03114 +0.3 1.1 hypothetical protein compare
MPMX19_04229 +0.3 2.7 Adaptive-response sensory-kinase SasA compare
MPMX19_03716 +0.3 1.7 hypothetical protein compare
MPMX19_00263 +0.3 1.2 hypothetical protein compare
MPMX19_03816 +0.3 0.7 hypothetical protein compare
MPMX19_04792 +0.3 1.2 hypothetical protein compare
MPMX19_00792 +0.3 2.1 hypothetical protein compare
MPMX19_02809 +0.3 1.5 D-erythronate kinase compare
MPMX19_03090 +0.3 2.0 Macrolide export ATP-binding/permease protein MacB compare
MPMX19_02953 +0.3 1.8 Ribose import ATP-binding protein RbsA compare
MPMX19_04633 +0.3 1.4 hypothetical protein compare
MPMX19_04286 +0.3 1.7 hypothetical protein compare
MPMX19_03687 +0.3 1.7 hypothetical protein compare
MPMX19_06096 +0.3 1.9 hypothetical protein compare
MPMX19_03910 +0.3 2.5 hypothetical protein compare
MPMX19_03694 +0.3 0.9 hypothetical protein compare
MPMX19_01944 +0.3 2.3 putative membrane transporter protein YfcA compare
MPMX19_01559 +0.3 1.2 hypothetical protein compare
MPMX19_04505 +0.3 1.5 Aliphatic amidase regulator compare
MPMX19_00717 +0.3 1.9 hypothetical protein compare
MPMX19_04770 +0.3 1.9 Sialic acid-binding periplasmic protein SiaP compare
MPMX19_01622 +0.3 1.7 hypothetical protein compare
MPMX19_01757 +0.3 1.8 Ferredoxin--NADP reductase compare
MPMX19_04727 +0.3 1.6 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm; spin-x control experiments