Experiment set1S566 for Paraburkholderia sabiae LMG 24235

Compare to:

LB_noSalt with Zinc sulfate heptahydrate 0.5 mM

200 most important genes:

  gene name fitness t score description  
QEN71_RS03980 -3.6 -6.0 cation diffusion facilitator family transporter compare
QEN71_RS28920 -3.4 -1.9 flagellar basal body rod protein FlgB compare
QEN71_RS15810 -3.4 -3.4 iron-siderophore ABC transporter substrate-binding protein compare
QEN71_RS22490 -3.0 -2.9 50S ribosomal protein L9 compare
QEN71_RS18635 -3.0 -1.7 hypothetical protein compare
QEN71_RS17615 -2.7 -4.8 3-isopropylmalate dehydratase small subunit compare
QEN71_RS05450 -2.7 -2.6 outer membrane protein assembly factor BamC compare
QEN71_RS27675 -2.7 -3.1 peptide chain release factor N(5)-glutamine methyltransferase compare
QEN71_RS22330 -2.6 -2.5 glycosyltransferase family 39 protein compare
QEN71_RS01240 -2.6 -1.8 acyl-ACP desaturase compare
QEN71_RS01440 -2.5 -3.0 S41 family peptidase compare
QEN71_RS28885 -2.5 -3.5 flagellar basal body P-ring protein FlgI compare
QEN71_RS07820 -2.5 -6.8 cytochrome d ubiquinol oxidase subunit II compare
QEN71_RS17605 -2.5 -7.4 3-isopropylmalate dehydratase large subunit compare
QEN71_RS31390 -2.5 -3.3 FadR/GntR family transcriptional regulator compare
QEN71_RS40320 -2.4 -10.1 GntR family transcriptional regulator compare
QEN71_RS28940 -2.4 -4.0 RNA polymerase sigma factor FliA compare
QEN71_RS28105 -2.4 -1.7 c-type cytochrome compare
QEN71_RS21530 -2.4 -1.4 aspartate aminotransferase family protein compare
QEN71_RS27795 -2.4 -6.8 Do family serine endopeptidase compare
QEN71_RS07825 -2.4 -12.9 cytochrome ubiquinol oxidase subunit I compare
QEN71_RS17570 -2.3 -6.0 GntR family transcriptional regulator compare
QEN71_RS03005 -2.3 -5.4 ATP-dependent Clp protease ATP-binding subunit ClpA compare
QEN71_RS36065 -2.3 -1.9 sugar ABC transporter substrate-binding protein compare
QEN71_RS28880 -2.3 -5.1 flagellar assembly peptidoglycan hydrolase FlgJ compare
QEN71_RS10335 -2.3 -3.1 hypothetical protein compare
QEN71_RS00180 -2.3 -4.1 DUF4390 domain-containing protein compare
QEN71_RS26465 -2.3 -2.2 polynucleotide adenylyltransferase PcnB compare
QEN71_RS25420 -2.2 -5.7 oligosaccharide flippase family protein compare
QEN71_RS06310 -2.2 -1.5 lysophospholipid transporter LplT compare
QEN71_RS22510 -2.2 -3.3 anti-sigma factor compare
QEN71_RS17620 -2.2 -5.4 3-isopropylmalate dehydrogenase compare
QEN71_RS27600 -2.2 -5.2 redox-regulated ATPase YchF compare
QEN71_RS27915 -2.2 -2.9 lipid asymmetry maintenance ABC transporter permease subunit MlaE compare
QEN71_RS22400 -2.1 -9.6 threonine synthase compare
QEN71_RS11760 -2.1 -2.1 tautomerase family protein compare
QEN71_RS25730 -2.1 -5.2 ABC transporter permease compare
QEN71_RS15560 -2.1 -4.2 catalase compare
QEN71_RS25425 -2.1 -4.0 glycosyltransferase compare
QEN71_RS27895 -2.1 -2.0 STAS domain-containing protein compare
QEN71_RS18005 -2.1 -4.9 LuxR family transcriptional regulator compare
QEN71_RS21425 -2.1 -6.8 HAMP domain-containing sensor histidine kinase compare
QEN71_RS06190 -2.0 -1.9 C40 family peptidase compare
QEN71_RS21935 -2.0 -5.1 glucose-6-phosphate isomerase compare
QEN71_RS24945 -2.0 -5.1 fused uroporphyrinogen-III synthase HemD/membrane protein HemX compare
QEN71_RS12935 -2.0 -3.0 glutamine synthetase family protein compare
QEN71_RS25720 -2.0 -4.7 SAM-dependent methyltransferase compare
QEN71_RS01430 -2.0 -2.7 phosphoenolpyruvate--protein phosphotransferase compare
QEN71_RS28895 -2.0 -3.9 flagellar basal-body rod protein FlgG compare
QEN71_RS25700 -2.0 -4.3 DegT/DnrJ/EryC1/StrS family aminotransferase compare
QEN71_RS26480 -2.0 -2.6 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
QEN71_RS29225 -1.9 -7.5 L-serine ammonia-lyase compare
QEN71_RS02995 -1.9 -2.4 cold shock domain-containing protein CspD compare
QEN71_RS02450 -1.9 -3.1 5-(carboxyamino)imidazole ribonucleotide synthase compare
QEN71_RS18000 -1.9 -3.4 helix-turn-helix transcriptional regulator compare
QEN71_RS06355 -1.9 -4.4 succinyl-diaminopimelate desuccinylase compare
QEN71_RS25715 -1.9 -4.2 acetyltransferase compare
QEN71_RS25725 -1.9 -9.0 ABC transporter ATP-binding protein compare
QEN71_RS02150 -1.9 -3.1 lysophospholipid acyltransferase family protein compare
QEN71_RS27785 -1.9 -2.2 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
QEN71_RS40875 -1.9 -1.5 hypothetical protein compare
QEN71_RS21915 -1.9 -5.3 peptidylprolyl isomerase compare
QEN71_RS04250 -1.9 -5.4 M48 family metallopeptidase compare
QEN71_RS01820 -1.9 -12.7 AI-2E family transporter compare
QEN71_RS14065 -1.9 -1.5 hypothetical protein compare
QEN71_RS23785 -1.9 -6.9 bacterioferritin compare
QEN71_RS26855 -1.8 -1.7 dihydroorotase compare
QEN71_RS11075 -1.8 -1.4 hypothetical protein compare
QEN71_RS27920 -1.8 -4.0 ABC transporter ATP-binding protein compare
QEN71_RS22925 -1.8 -6.8 ribonuclease R compare
QEN71_RS25690 -1.8 -3.4 glycosyltransferase family 4 protein compare
QEN71_RS09545 -1.8 -3.7 Dyp-type peroxidase compare
QEN71_RS37590 -1.8 -1.1 DUF4148 domain-containing protein compare
QEN71_RS25205 -1.8 -4.0 leucyl aminopeptidase compare
QEN71_RS08115 -1.7 -1.6 DUF2164 domain-containing protein compare
QEN71_RS26190 -1.7 -4.0 DUF883 family protein compare
QEN71_RS27345 -1.7 -2.0 bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ compare
QEN71_RS28915 -1.7 -4.8 flagellar basal body rod protein FlgC compare
QEN71_RS40485 -1.7 -1.4 transposase compare
QEN71_RS00360 -1.7 -4.8 DUF484 family protein compare
QEN71_RS05680 -1.7 -4.4 exodeoxyribonuclease III compare
QEN71_RS28905 -1.7 -7.9 flagellar hook protein FlgE compare
QEN71_RS02570 -1.7 -6.4 ABC transporter ATP-binding protein compare
QEN71_RS30945 -1.6 -2.3 hypothetical protein compare
QEN71_RS03690 -1.6 -4.7 porin compare
QEN71_RS04575 -1.6 -5.1 RNA polymerase sigma factor RpoE compare
QEN71_RS23015 -1.6 -6.6 RNA chaperone Hfq compare
QEN71_RS37100 -1.6 -1.9 NAD(P)-dependent oxidoreductase compare
QEN71_RS24970 -1.6 -4.8 argininosuccinate lyase compare
QEN71_RS03665 -1.6 -2.5 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase compare
QEN71_RS20980 -1.6 -1.1 CHAP domain-containing protein compare
QEN71_RS23945 -1.6 -1.9 5S ribosomal RNA compare
QEN71_RS09845 -1.6 -1.4 peptide-methionine (R)-S-oxide reductase MsrB compare
QEN71_RS42345 -1.6 -1.3 hypothetical protein compare
QEN71_RS25695 -1.6 -6.7 glycosyltransferase family 4 protein compare
QEN71_RS24940 -1.6 -8.1 heme biosynthesis protein HemY compare
QEN71_RS30005 -1.6 -1.4 SDR family NAD(P)-dependent oxidoreductase compare
QEN71_RS35645 -1.5 -6.2 TetR/AcrR family transcriptional regulator compare
QEN71_RS23515 -1.5 -5.5 histidine ammonia-lyase compare
QEN71_RS26780 -1.5 -3.3 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase compare
QEN71_RS28925 -1.5 -3.5 flagellar basal body P-ring formation chaperone FlgA compare
QEN71_RS29100 -1.5 -1.1 flagellar protein FliT compare
QEN71_RS21980 -1.5 -4.6 ATP-dependent Clp protease ATP-binding subunit ClpX compare
QEN71_RS14360 -1.5 -1.1 MxaS protein compare
QEN71_RS03320 -1.5 -7.2 bifunctional transcriptional regulator/glucokinase compare
QEN71_RS15820 -1.5 -6.2 Fe(3+)-hydroxamate ABC transporter permease FhuB compare
QEN71_RS11870 -1.5 -1.1 alkanesulfonate monooxygenase compare
QEN71_RS35030 -1.5 -6.3 efflux transporter outer membrane subunit compare
QEN71_RS42485 -1.4 -1.8 nitrogen fixation protein NifZ compare
QEN71_RS17575 -1.4 -1.7 succinate dehydrogenase, cytochrome b556 subunit compare
QEN71_RS05985 -1.4 -3.8 tetratricopeptide repeat protein compare
QEN71_RS27650 -1.4 -3.4 hypothetical protein compare
QEN71_RS27005 -1.4 -4.7 type I glyceraldehyde-3-phosphate dehydrogenase compare
QEN71_RS25630 -1.4 -3.5 NAD-dependent epimerase/dehydratase family protein compare
QEN71_RS00235 -1.4 -1.1 rod shape-determining protein MreD compare
QEN71_RS25710 -1.4 -5.3 GNAT family N-acetyltransferase compare
QEN71_RS38745 -1.4 -1.6 SDR family oxidoreductase compare
QEN71_RS00135 -1.4 -7.0 LysR family transcriptional regulator compare
QEN71_RS04475 -1.4 -4.8 hypothetical protein compare
QEN71_RS28955 -1.4 -4.9 flagellar biosynthesis protein FlhA compare
QEN71_RS40475 -1.4 -1.9 IS256 family transposase compare
QEN71_RS15185 -1.4 -9.6 RNA polymerase sigma factor RpoD compare
QEN71_RS29090 -1.4 -2.1 flagellin domain-containing protein compare
QEN71_RS36600 -1.3 -3.7 carbohydrate ABC transporter permease compare
QEN71_RS12715 -1.3 -2.1 DUF305 domain-containing protein compare
QEN71_RS15825 -1.3 -4.9 ABC transporter ATP-binding protein compare
QEN71_RS10925 -1.3 -0.9 helix-turn-helix domain-containing protein compare
QEN71_RS27225 -1.3 -6.7 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
QEN71_RS15870 -1.3 -3.8 IclR family transcriptional regulator compare
QEN71_RS27365 -1.3 -1.4 peroxiredoxin compare
QEN71_RS28900 -1.3 -2.8 flagellar basal-body rod protein FlgF compare
QEN71_RS12340 -1.3 -2.2 hypothetical protein compare
QEN71_RS09550 -1.3 -2.5 family 1 encapsulin nanocompartment shell protein compare
QEN71_RS28715 -1.3 -5.2 methylenetetrahydrofolate reductase [NAD(P)H] compare
QEN71_RS24165 -1.3 -7.7 triose-phosphate isomerase compare
QEN71_RS28065 -1.3 -2.4 penicillin-binding protein 1A compare
QEN71_RS25625 -1.3 -9.7 glycosyltransferase family 2 protein compare
QEN71_RS32395 -1.3 -2.2 DUF3563 family protein compare
QEN71_RS27725 -1.3 -6.4 TetR/AcrR family transcriptional regulator compare
QEN71_RS33430 -1.3 -0.9 hypothetical protein compare
QEN71_RS21050 -1.3 -2.2 DUF3331 domain-containing protein compare
QEN71_RS11695 -1.3 -2.5 GntR family transcriptional regulator compare
QEN71_RS20880 -1.3 -1.5 TetR/AcrR family transcriptional regulator compare
QEN71_RS13710 -1.3 -3.1 helix-turn-helix domain-containing protein compare
QEN71_RS12045 -1.3 -1.3 5-carboxymethyl-2-hydroxymuconate Delta-isomerase compare
QEN71_RS11845 -1.3 -2.3 LLM class flavin-dependent oxidoreductase compare
QEN71_RS12530 -1.3 -1.8 hypothetical protein compare
QEN71_RS02095 -1.3 -3.0 acyl-CoA thioesterase compare
QEN71_RS04835 -1.3 -3.0 phosphate ABC transporter ATP-binding protein PstB compare
QEN71_RS23175 -1.3 -2.6 alternative ribosome rescue aminoacyl-tRNA hydrolase ArfB compare
QEN71_RS12265 -1.3 -1.2 hypothetical protein compare
QEN71_RS30250 -1.3 -1.4 glycine zipper 2TM domain-containing protein compare
QEN71_RS30565 -1.2 -2.0 MarR family transcriptional regulator compare
QEN71_RS00700 -1.2 -9.4 N-6 DNA methylase compare
QEN71_RS15840 -1.2 -4.0 RNA polymerase factor sigma-70 compare
QEN71_RS10100 -1.2 -1.6 ribonuclease activity regulator RraA compare
QEN71_RS25045 -1.2 -7.6 translocation/assembly module TamB domain-containing protein compare
QEN71_RS07485 -1.2 -1.1 4-hydroxyphenylacetate 3-monooxygenase, reductase component compare
QEN71_RS21000 -1.2 -1.2 DUF4148 domain-containing protein compare
QEN71_RS06415 -1.2 -7.7 type I methionyl aminopeptidase compare
QEN71_RS25600 -1.2 -7.9 SDR family oxidoreductase compare
QEN71_RS04585 -1.2 -6.1 MucB/RseB C-terminal domain-containing protein compare
QEN71_RS10685 -1.2 -1.5 Flp family type IVb pilin compare
QEN71_RS12930 -1.2 -3.2 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein compare
QEN71_RS37935 -1.2 -1.2 efflux transporter outer membrane subunit compare
QEN71_RS33045 -1.2 -1.0 carbamate kinase compare
QEN71_RS37095 -1.2 -1.1 NIPSNAP family protein compare
QEN71_RS23020 -1.2 -1.2 hypothetical protein compare
QEN71_RS33735 -1.2 -1.4 SDR family oxidoreductase compare
QEN71_RS20780 -1.1 -2.5 hypothetical protein compare
QEN71_RS15190 -1.1 -4.6 hypothetical protein compare
QEN71_RS11065 -1.1 -2.3 proline/glycine betaine ABC transporter permease compare
QEN71_RS28095 -1.1 -3.5 c-type cytochrome biogenesis protein CcsB compare
QEN71_RS23370 -1.1 -2.2 arginine/ornithine succinyltransferase subunit alpha compare
QEN71_RS24450 -1.1 -7.6 O-antigen ligase family protein compare
QEN71_RS16210 -1.1 -3.9 DUF429 domain-containing protein compare
QEN71_RS35095 -1.1 -0.8 HU family DNA-binding protein compare
QEN71_RS36370 -1.1 -1.9 DUF1330 domain-containing protein compare
QEN71_RS38940 -1.1 -2.2 MFS transporter compare
QEN71_RS02575 -1.1 -4.7 metal ABC transporter solute-binding protein compare
QEN71_RS23870 -1.1 -7.0 excinuclease ABC subunit UvrB compare
QEN71_RS25675 -1.1 -6.0 hypothetical protein compare
QEN71_RS25735 -1.1 -7.8 glycosyltransferase family 2 protein compare
QEN71_RS30465 -1.1 -1.4 cytochrome b/b6 domain-containing protein compare
QEN71_RS00690 -1.1 -9.4 DEAD/DEAH box helicase compare
QEN71_RS17135 -1.1 -0.9 hypothetical protein compare
QEN71_RS32615 -1.1 -2.0 hypothetical protein compare
QEN71_RS00695 -1.1 -5.7 DEAD/DEAH box helicase compare
QEN71_RS23110 -1.1 -2.9 ribosome maturation factor RimP compare
QEN71_RS23190 -1.1 -1.0 exodeoxyribonuclease V subunit beta compare
QEN71_RS26275 -1.1 -2.9 tol-pal system protein YbgF compare
QEN71_RS12795 -1.1 -1.2 hypothetical protein compare
QEN71_RS39335 -1.1 -1.0 hypothetical protein compare
QEN71_RS17860 -1.1 -5.7 AMP nucleosidase compare
QEN71_RS04890 -1.1 -1.5 hypothetical protein compare
QEN71_RS15745 -1.1 -2.2 DUF3331 domain-containing protein compare
QEN71_RS30105 -1.1 -2.5 replication initiation protein compare
QEN71_RS35025 -1.1 -5.3 efflux RND transporter permease subunit compare
QEN71_RS30240 -1.1 -1.8 hypothetical protein compare
QEN71_RS01715 -1.1 -5.1 tetratricopeptide repeat protein compare


Specific Phenotypes

For 7 genes in this experiment

For stress Zinc sulfate heptahydrate in Paraburkholderia sabiae LMG 24235

For stress Zinc sulfate heptahydrate across organisms