Experiment set1S56 for Azospirillum sp. SherDot2

Compare to:

NL-CCM; spin-x control

200 most important genes:

  gene name fitness t score description  
MPMX19_03906 -4.7 -16.5 Pca regulon regulatory protein compare
MPMX19_01053 -2.4 -5.7 Dihydroorotase compare
MPMX19_02267 -2.3 -1.6 hypothetical protein compare
MPMX19_00838 -2.1 -4.0 GTP pyrophosphokinase rsh compare
MPMX19_01054 -2.1 -7.1 Aspartate carbamoyltransferase compare
MPMX19_00705 -2.0 -4.2 Cell division coordinator CpoB compare
MPMX19_02657 -2.0 -15.5 Glutamate synthase [NADPH] large chain compare
MPMX19_00128 -1.8 -11.6 hypothetical protein compare
MPMX19_05358 -1.8 -1.8 hypothetical protein compare
MPMX19_00530 -1.8 -4.0 Orotate phosphoribosyltransferase compare
MPMX19_01796 -1.7 -2.5 hypothetical protein compare
MPMX19_01495 -1.7 -2.9 hypothetical protein compare
MPMX19_01484 -1.7 -7.6 Flagellar basal-body rod protein FlgG compare
MPMX19_02177 -1.6 -4.5 Succinylornithine transaminase/acetylornithine aminotransferase compare
MPMX19_06547 -1.6 -5.9 hypothetical protein compare
MPMX19_02980 -1.6 -2.7 Hydrogen cyanide synthase subunit HcnA compare
MPMX19_00142 -1.6 -1.8 hypothetical protein compare
MPMX19_03157 -1.5 -2.3 hypothetical protein compare
MPMX19_00858 -1.5 -4.7 Flagellar biosynthetic protein FliP compare
MPMX19_04835 -1.5 -3.4 hypothetical protein compare
MPMX19_00186 -1.5 -1.9 hypothetical protein compare
MPMX19_01884 -1.5 -3.6 Phosphoribosylformylglycinamidine synthase subunit PurQ compare
MPMX19_01703 -1.5 -2.3 hypothetical protein compare
MPMX19_01883 -1.5 -6.7 Phosphoribosylformylglycinamidine synthase subunit PurL compare
MPMX19_05680 -1.4 -4.0 Cell cycle response regulator CtrA compare
MPMX19_00503 -1.4 -4.8 ATP-dependent Clp protease ATP-binding subunit ClpA compare
MPMX19_05727 -1.4 -6.6 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX19_00182 -1.4 -2.2 hypothetical protein compare
MPMX19_00126 -1.3 -3.2 hypothetical protein compare
MPMX19_02658 -1.3 -8.7 Glutamate synthase [NADPH] small chain compare
MPMX19_00714 -1.3 -6.3 Ferrous-iron efflux pump FieF compare
MPMX19_01560 -1.3 -2.1 3'-5' exonuclease DinG compare
MPMX19_06985 -1.3 -1.9 L-malyl-CoA/beta-methylmalyl-CoA lyase compare
MPMX19_00266 -1.3 -2.5 hypothetical protein compare
MPMX19_01483 -1.2 -7.4 Flagellar basal-body rod protein FlgG compare
MPMX19_01597 -1.2 -2.2 23S rRNA (uridine(2479)-2'-O)-methyltransferase compare
MPMX19_00906 -1.2 -8.1 Amidophosphoribosyltransferase compare
MPMX19_02544 -1.2 -3.0 hypothetical protein compare
MPMX19_00867 -1.2 -8.9 Flagellar biosynthetic protein FlhB compare
MPMX19_00790 -1.2 -2.6 hypothetical protein compare
MPMX19_02084 -1.2 -1.1 hypothetical protein compare
MPMX19_00840 -1.2 -2.8 Pyridoxine 5'-phosphate synthase compare
MPMX19_00094 -1.1 -1.9 hypothetical protein compare
MPMX19_01669 -1.1 -3.5 Transcriptional regulator MraZ compare
MPMX19_04990 -1.1 -3.2 Hydrogen peroxide-inducible genes activator compare
MPMX19_05679 -1.1 -6.4 Flagellum-specific ATP synthase compare
MPMX19_01014 -1.1 -4.3 Indole-3-glycerol phosphate synthase compare
MPMX19_04952 -1.1 -2.0 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_05065 -1.1 -2.4 Farnesyl diphosphate synthase compare
MPMX19_00544 -1.1 -1.6 hypothetical protein compare
MPMX19_00015 -1.1 -1.9 hypothetical protein compare
MPMX19_04000 -1.1 -2.9 Flagellar motor switch protein FliG compare
MPMX19_04092 -1.1 -5.1 Flagellar motor switch protein FliN compare
MPMX19_00866 -1.1 -5.5 Flagellar biosynthetic protein FliR compare
MPMX19_02207 -1.1 -2.5 N-(5'-phosphoribosyl)anthranilate isomerase compare
MPMX19_02675 -1.0 -7.8 Phosphoenolpyruvate-dependent phosphotransferase system compare
MPMX19_02543 -1.0 -1.9 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX19_01718 -1.0 -2.3 Ribosomal large subunit pseudouridine synthase C compare
MPMX19_03634 -1.0 -2.5 Arginase compare
MPMX19_00297 -1.0 -1.3 4-carboxy-4-hydroxy-2-oxoadipate aldolase compare
MPMX19_01400 -1.0 -2.2 hypothetical protein compare
MPMX19_01125 -1.0 -1.5 hypothetical protein compare
MPMX19_00020 -1.0 -1.6 hypothetical protein compare
MPMX19_02002 -1.0 -2.5 hypothetical protein compare
MPMX19_04210 -1.0 -1.9 hypothetical protein compare
MPMX19_05070 -1.0 -4.4 hypothetical protein compare
MPMX19_00472 -1.0 -1.4 Protein HesB, heterocyst compare
MPMX19_01084 -1.0 -3.6 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX19_04208 -1.0 -2.3 flagellum biosynthesis repressor protein FlbT compare
MPMX19_01304 -1.0 -5.9 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX19_03389 -1.0 -2.4 Carbon monoxide dehydrogenase small chain compare
MPMX19_01394 -1.0 -1.5 hypothetical protein compare
MPMX19_00304 -1.0 -2.6 Phosphatidylcholine synthase compare
MPMX19_05586 -1.0 -1.5 hypothetical protein compare
MPMX19_04093 -1.0 -3.2 hypothetical protein compare
MPMX19_02298 -1.0 -2.5 hypothetical protein compare
MPMX19_06490 -1.0 -1.7 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_04094 -1.0 -6.0 Flagellar M-ring protein compare
MPMX19_01822 -1.0 -4.8 2-isopropylmalate synthase compare
MPMX19_04963 -1.0 -1.4 Cysteine desulfurase IscS compare
MPMX19_00694 -1.0 -2.3 2',3'-cyclic-nucleotide 2'-phosphodiesterase compare
MPMX19_00696 -1.0 -4.3 Crossover junction endodeoxyribonuclease RuvC compare
MPMX19_02320 -0.9 -1.8 HTH-type transcriptional regulator GltR compare
MPMX19_02268 -0.9 -2.9 hypothetical protein compare
MPMX19_05872 -0.9 -2.4 Redox-sensitive transcriptional activator SoxR compare
MPMX19_00862 -0.9 -5.0 hypothetical protein compare
MPMX19_05813 -0.9 -2.1 2-hydroxy-3-oxopropionate reductase compare
MPMX19_06863 -0.9 -2.8 hypothetical protein compare
MPMX19_02579 -0.9 -1.2 hypothetical protein compare
MPMX19_00167 -0.9 -1.7 hypothetical protein compare
MPMX19_01499 -0.9 -3.4 hypothetical protein compare
MPMX19_01365 -0.9 -2.4 hypothetical protein compare
MPMX19_02664 -0.9 -1.5 Arabinose 5-phosphate isomerase KdsD compare
MPMX19_03063 -0.9 -2.5 hypothetical protein compare
MPMX19_00904 -0.9 -5.0 DNA repair protein RadA compare
MPMX19_05044 -0.9 -1.3 hypothetical protein compare
MPMX19_04100 -0.9 -2.4 hypothetical protein compare
MPMX19_06130 -0.9 -3.5 hypothetical protein compare
MPMX19_02241 -0.8 -2.1 hypothetical protein compare
MPMX19_06546 -0.8 -1.7 hypothetical protein compare
MPMX19_01149 -0.8 -4.1 Polyphosphate kinase compare
MPMX19_06734 -0.8 -7.2 Alginate biosynthesis protein AlgA compare
MPMX19_05119 -0.8 -6.3 Glucose-6-phosphate 1-dehydrogenase compare
MPMX19_06230 -0.8 -1.4 hypothetical protein compare
MPMX19_00234 -0.8 -2.2 hypothetical protein compare
MPMX19_02531 -0.8 -1.7 hypothetical protein compare
MPMX19_05387 -0.8 -2.2 1,4-dihydroxy-2-naphthoyl-CoA hydrolase compare
MPMX19_02981 -0.8 -3.6 Hydrogen cyanide synthase subunit HcnC compare
MPMX19_02580 -0.8 -2.2 Acetyltransferase compare
MPMX19_06123 -0.8 -1.6 hypothetical protein compare
MPMX19_04430 -0.8 -2.2 hypothetical protein compare
MPMX19_04207 -0.8 -2.0 hypothetical protein compare
MPMX19_06306 -0.8 -1.6 hypothetical protein compare
MPMX19_06644 -0.8 -6.7 GDP-mannose 4,6-dehydratase compare
MPMX19_00887 -0.8 -1.8 hypothetical protein compare
MPMX19_04551 -0.8 -1.0 HTH-type transcriptional repressor RspR compare
MPMX19_00863 -0.8 -4.1 Flagellar basal-body rod protein FlgC compare
MPMX19_00478 -0.8 -1.6 putative protein RP812 compare
MPMX19_01012 -0.8 -1.4 Cyclic pyranopterin monophosphate synthase compare
MPMX19_05181 -0.8 -1.7 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_03724 -0.8 -1.3 hypothetical protein compare
MPMX19_01761 -0.8 -2.8 Bacteriohemerythrin compare
MPMX19_05328 -0.8 -2.1 hypothetical protein compare
MPMX19_01297 -0.8 -1.5 hypothetical protein compare
MPMX19_02300 -0.8 -2.0 Transcription elongation factor GreA compare
MPMX19_01497 -0.8 -2.9 hypothetical protein compare
MPMX19_00118 -0.7 -2.5 putative parvulin-type peptidyl-prolyl cis-trans isomerase compare
MPMX19_03367 -0.7 -2.1 Magnetosome membrane protein 22 compare
MPMX19_01330 -0.7 -1.9 3-mercaptopyruvate sulfurtransferase compare
MPMX19_01864 -0.7 -1.6 Regulatory protein AtoC compare
MPMX19_02466 -0.7 -1.4 Octopine permease ATP-binding protein P compare
MPMX19_06258 -0.7 -2.9 hypothetical protein compare
MPMX19_02054 -0.7 -2.4 hypothetical protein compare
MPMX19_04668 -0.7 -2.1 HTH-type transcriptional regulator DmlR compare
MPMX19_06014 -0.7 -3.9 Histidinol-phosphate aminotransferase compare
MPMX19_05272 -0.7 -2.0 hypothetical protein compare
MPMX19_01323 -0.7 -2.1 hypothetical protein compare
MPMX19_00832 -0.7 -3.0 hypothetical protein compare
MPMX19_04610 -0.7 -2.0 putative enoyl-CoA hydratase 1 compare
MPMX19_01918 -0.7 -1.1 tRNA-Ala compare
MPMX19_01485 -0.7 -5.1 hypothetical protein compare
MPMX19_01720 -0.7 -2.0 Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB compare
MPMX19_06877 -0.7 -2.3 hypothetical protein compare
MPMX19_04171 -0.7 -1.5 16S ribosomal RNA compare
MPMX19_01321 -0.7 -2.4 tRNA-Cys compare
MPMX19_03335 -0.7 -2.0 hypothetical protein compare
MPMX19_04864 -0.7 -2.1 hypothetical protein compare
MPMX19_02136 -0.7 -1.0 Phage shock protein A compare
MPMX19_05678 -0.7 -3.5 hypothetical protein compare
MPMX19_02551 -0.7 -1.7 hypothetical protein compare
MPMX19_01939 -0.7 -2.6 2,3-bisphosphoglycerate-independent phosphoglycerate mutase compare
MPMX19_02601 -0.7 -3.4 hypothetical protein compare
MPMX19_06327 -0.7 -1.1 hypothetical protein compare
MPMX19_02809 -0.7 -1.5 D-erythronate kinase compare
MPMX19_01395 -0.7 -1.4 hypothetical protein compare
MPMX19_04954 -0.7 -2.2 Putative hydro-lyase compare
MPMX19_05442 -0.7 -1.8 Ribosomal large subunit pseudouridine synthase D compare
MPMX19_01496 -0.7 -4.0 hypothetical protein compare
MPMX19_01714 -0.7 -1.3 tRNA-modifying protein YgfZ compare
MPMX19_02116 -0.7 -1.3 Cold shock protein CspA compare
MPMX19_03654 -0.7 -1.3 Fructokinase compare
MPMX19_06033 -0.7 -2.9 Phosphate transport system permease protein PstC compare
MPMX19_00779 -0.7 -3.4 hypothetical protein compare
MPMX19_06804 -0.7 -0.9 hypothetical protein compare
MPMX19_06539 -0.7 -1.2 hypothetical protein compare
MPMX19_02737 -0.7 -2.8 Tryptophan synthase alpha chain compare
MPMX19_06414 -0.7 -2.2 hypothetical protein compare
MPMX19_04940 -0.6 -3.5 Histidine ammonia-lyase compare
MPMX19_01486 -0.6 -4.0 Flagellar L-ring protein compare
MPMX19_05989 -0.6 -2.0 HTH-type transcriptional regulator HdfR compare
MPMX19_01249 -0.6 -1.2 Periplasmic serine endoprotease DegP compare
MPMX19_03499 -0.6 -1.5 Formate dehydrogenase, cytochrome b556(fdo) subunit compare
MPMX19_01487 -0.6 -2.1 hypothetical protein compare
MPMX19_05014 -0.6 -1.5 Cytochrome c1 compare
MPMX19_03635 -0.6 -0.8 DNA-binding transcriptional activator DecR compare
MPMX19_02180 -0.6 -2.0 hypothetical protein compare
MPMX19_05438 -0.6 -1.8 hypothetical protein compare
MPMX19_01577 -0.6 -2.0 hypothetical protein compare
MPMX19_06746 -0.6 -1.3 Chemotaxis protein CheW compare
MPMX19_05449 -0.6 -1.6 hypothetical protein compare
MPMX19_05464 -0.6 -3.7 hypothetical protein compare
MPMX19_03252 -0.6 -2.1 hypothetical protein compare
MPMX19_04951 -0.6 -4.0 hypothetical protein compare
MPMX19_06266 -0.6 -1.1 hypothetical protein compare
MPMX19_03452 -0.6 -1.9 Putative aliphatic sulfonates transport permease protein SsuC compare
MPMX19_04985 -0.6 -0.9 HTH-type transcriptional regulator DmlR compare
MPMX19_06093 -0.6 -2.6 Lactate utilization protein A compare
MPMX19_06032 -0.6 -3.6 Phosphate-binding protein PstS compare
MPMX19_06866 -0.6 -1.7 HTH-type transcriptional regulator NimR compare
MPMX19_03781 -0.6 -3.7 hypothetical protein compare
MPMX19_02095 -0.6 -2.1 Ferric uptake regulation protein compare
MPMX19_05967 -0.6 -2.1 D-erythritol 1-phosphate dehydrogenase compare
MPMX19_03631 -0.6 -0.8 hypothetical protein compare
MPMX19_02613 -0.6 -1.0 hypothetical protein compare
MPMX19_06821 -0.6 -1.7 (E)-2-((N-methylformamido)methylene)succinate hydrolase compare
MPMX19_06345 -0.6 -2.3 Pyruvate synthase subunit PorC compare
MPMX19_05404 -0.6 -2.4 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase compare
MPMX19_00766 -0.6 -1.6 hypothetical protein compare
MPMX19_02703 -0.6 -1.6 hypothetical protein compare
MPMX19_01845 -0.6 -2.9 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm; spin-x control experiments