Experiment set1S56 for Azospirillum sp. SherDot2

Compare to:

NL-CCM; spin-x control

200 most detrimental genes:

  gene name fitness t score description  
MPMX19_04449 +1.4 2.7 Inosine-5'-monophosphate dehydrogenase compare
MPMX19_06381 +1.0 2.4 putative manganese efflux pump MntP compare
MPMX19_06202 +0.9 2.4 hypothetical protein compare
MPMX19_06193 +0.9 2.5 Flagellar hook-basal body complex protein FliE compare
MPMX19_06815 +0.9 3.4 hypothetical protein compare
MPMX19_01493 +0.9 1.8 Flagellar assembly protein FliX compare
MPMX19_01955 +0.8 1.5 Putative anti-sigma factor antagonist compare
MPMX19_00268 +0.8 2.9 Transcriptional regulatory protein OmpR compare
MPMX19_06197 +0.8 1.0 hypothetical protein compare
MPMX19_04118 +0.8 3.1 Sensor histidine kinase RcsC compare
MPMX19_01113 +0.8 1.9 Adaptive-response sensory-kinase SasA compare
MPMX19_04863 +0.8 2.2 Transcriptional regulatory protein LnrK compare
MPMX19_05581 +0.8 1.1 hypothetical protein compare
MPMX19_02424 +0.7 2.8 hypothetical protein compare
MPMX19_00852 +0.7 1.8 hypothetical protein compare
MPMX19_06498 +0.7 3.4 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_02816 +0.7 2.8 3-oxoacyl-[acyl-carrier-protein] reductase FabG compare
MPMX19_04458 +0.7 2.8 2-hydroxy-3-oxopropionate reductase compare
MPMX19_05207 +0.7 1.3 Hemolysin secretion protein D, plasmid compare
MPMX19_01479 +0.7 4.0 hypothetical protein compare
MPMX19_02536 +0.7 3.1 hypothetical protein compare
MPMX19_06785 +0.7 1.9 L-idonate 5-dehydrogenase (NAD(P)(+)) compare
MPMX19_00170 +0.7 2.2 hypothetical protein compare
MPMX19_06888 +0.7 2.8 hypothetical protein compare
MPMX19_02817 +0.7 1.4 Serine 3-dehydrogenase compare
MPMX19_01708 +0.7 2.0 hypothetical protein compare
MPMX19_06896 +0.6 2.1 L-aspartate oxidase compare
MPMX19_06090 +0.6 2.1 Pyruvate dehydrogenase complex repressor compare
MPMX19_04743 +0.6 2.1 Formyltransferase/hydrolase complex subunit D compare
MPMX19_04120 +0.6 2.5 hypothetical protein compare
MPMX19_06211 +0.6 2.3 tRNA-Ala compare
MPMX19_06677 +0.6 1.7 hypothetical protein compare
MPMX19_04700 +0.6 2.1 Adaptive-response sensory-kinase SasA compare
MPMX19_00212 +0.6 5.1 Nitrogen fixation regulation protein FixK compare
MPMX19_03823 +0.6 2.0 hypothetical protein compare
MPMX19_04202 +0.6 2.9 Dihydrolipoyllysine-residue acetyltransferase component of acetoin cleaving system compare
MPMX19_06979 +0.6 1.4 hypothetical protein compare
MPMX19_00208 +0.6 1.3 hypothetical protein compare
MPMX19_04726 +0.6 2.4 Glycine betaine/choline transport system permease protein OusW compare
MPMX19_04682 +0.6 1.2 hypothetical protein compare
MPMX19_03710 +0.6 2.5 Glycine cleavage system transcriptional activator compare
MPMX19_05430 +0.6 1.6 HTH-type transcriptional regulator DmlR compare
MPMX19_04095 +0.6 1.9 hypothetical protein compare
MPMX19_00687 +0.6 1.6 hypothetical protein compare
MPMX19_06315 +0.6 1.5 ISL3 family transposase ISAli18 compare
MPMX19_01947 +0.6 1.6 Chemotaxis protein CheY compare
MPMX19_02778 +0.6 1.8 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX19_04053 +0.5 2.2 Transcriptional regulatory protein OmpR compare
MPMX19_03916 +0.5 1.7 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
MPMX19_03694 +0.5 1.1 hypothetical protein compare
MPMX19_01059 +0.5 0.6 hypothetical protein compare
MPMX19_04492 +0.5 2.2 hypothetical protein compare
MPMX19_06042 +0.5 3.0 hypothetical protein compare
MPMX19_02279 +0.5 1.9 hypothetical protein compare
MPMX19_05157 +0.5 1.9 hypothetical protein compare
MPMX19_05220 +0.5 1.2 hypothetical protein compare
MPMX19_06518 +0.5 2.5 Methionine import system permease protein MetP compare
MPMX19_04531 +0.5 1.7 hypothetical protein compare
MPMX19_05656 +0.5 1.0 HTH-type transcriptional activator RhaR compare
MPMX19_06267 +0.5 2.1 hypothetical protein compare
MPMX19_00204 +0.5 1.9 hypothetical protein compare
MPMX19_04968 +0.5 1.0 hypothetical protein compare
MPMX19_05997 +0.5 1.3 hypothetical protein compare
MPMX19_05483 +0.5 2.5 hypothetical protein compare
MPMX19_06808 +0.5 1.3 HTH-type transcriptional regulator DmlR compare
MPMX19_04008 +0.5 0.9 Beta-peptidyl aminopeptidase BapA compare
MPMX19_06610 +0.5 1.2 hypothetical protein compare
MPMX19_03492 +0.5 1.7 3'-5' exonuclease DinG compare
MPMX19_06378 +0.5 2.7 hypothetical protein compare
MPMX19_02611 +0.5 1.9 hypothetical protein compare
MPMX19_03496 +0.5 1.6 Protein FdhE compare
MPMX19_00608 +0.5 0.8 hypothetical protein compare
MPMX19_04638 +0.5 1.1 D-inositol-3-phosphate glycosyltransferase compare
MPMX19_02727 +0.5 1.6 hypothetical protein compare
MPMX19_06519 +0.5 1.1 HTH-type transcriptional repressor NagR compare
MPMX19_01196 +0.5 1.7 hypothetical protein compare
MPMX19_03846 +0.5 1.4 hypothetical protein compare
MPMX19_03741 +0.5 1.4 hypothetical protein compare
MPMX19_00839 +0.5 1.0 hypothetical protein compare
MPMX19_00923 +0.5 1.9 hypothetical protein compare
MPMX19_05599 +0.5 1.7 hypothetical protein compare
MPMX19_06492 +0.5 2.1 IS5 family transposase ISAzs10 compare
MPMX19_02149 +0.5 1.5 hypothetical protein compare
MPMX19_02532 +0.5 1.3 Cytochrome c-type biogenesis protein CcmE compare
MPMX19_04937 +0.5 1.9 Mannosyl-D-glycerate transport/metabolism system repressor MngR compare
MPMX19_00240 +0.5 1.4 hypothetical protein compare
MPMX19_02865 +0.4 2.0 hypothetical protein compare
MPMX19_06460 +0.4 1.6 DNA-invertase hin compare
MPMX19_05252 +0.4 1.2 Carbon monoxide dehydrogenase medium chain compare
MPMX19_01480 +0.4 2.3 hypothetical protein compare
MPMX19_06933 +0.4 1.6 Manganese transport system ATP-binding protein MntB compare
MPMX19_03434 +0.4 1.7 hypothetical protein compare
MPMX19_03757 +0.4 1.1 D-ribose pyranase compare
MPMX19_05575 +0.4 1.3 hypothetical protein compare
MPMX19_06534 +0.4 2.0 Putative amino-acid ABC transporter-binding protein YhdW compare
MPMX19_04192 +0.4 2.3 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
MPMX19_06520 +0.4 1.5 Nitrate import ATP-binding protein NrtC compare
MPMX19_05089 +0.4 1.6 Acetyl-CoA acetyltransferase compare
MPMX19_03262 +0.4 0.9 putative HTH-type transcriptional repressor ExuR compare
MPMX19_03558 +0.4 1.4 hypothetical protein compare
MPMX19_02984 +0.4 2.7 Spermidine/putrescine import ATP-binding protein PotA compare
MPMX19_06437 +0.4 1.3 DNA-invertase hin compare
MPMX19_06281 +0.4 1.7 hypothetical protein compare
MPMX19_06699 +0.4 2.5 Nickel/cobalt efflux system RcnA compare
MPMX19_04161 +0.4 0.7 hypothetical protein compare
MPMX19_03642 +0.4 1.4 hypothetical protein compare
MPMX19_04659 +0.4 2.1 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_06908 +0.4 2.6 Leu/Ile/Val-binding protein compare
MPMX19_02063 +0.4 2.0 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_00717 +0.4 2.1 hypothetical protein compare
MPMX19_05618 +0.4 1.5 putative manganese efflux pump MntP compare
MPMX19_05205 +0.4 1.5 hypothetical protein compare
MPMX19_05015 +0.4 2.1 hypothetical protein compare
MPMX19_03085 +0.4 1.4 Hydrogen peroxide-inducible genes activator compare
MPMX19_06969 +0.4 1.1 hypothetical protein compare
MPMX19_00747 +0.4 1.6 Organic hydroperoxide resistance protein OhrB compare
MPMX19_05178 +0.4 1.8 Alkanesulfonate monooxygenase compare
MPMX19_02378 +0.4 1.3 hypothetical protein compare
MPMX19_04154 +0.4 1.7 hypothetical protein compare
MPMX19_02634 +0.4 1.8 DNA-binding transcriptional regulator BolA compare
MPMX19_01393 +0.4 1.9 hypothetical protein compare
MPMX19_06819 +0.4 1.4 hypothetical protein compare
MPMX19_02511 +0.4 1.0 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase compare
MPMX19_00049 +0.4 1.8 hypothetical protein compare
MPMX19_06528 +0.4 2.6 hypothetical protein compare
MPMX19_06044 +0.4 1.0 hypothetical protein compare
MPMX19_02094 +0.4 1.7 hypothetical protein compare
MPMX19_05036 +0.4 2.0 hypothetical protein compare
MPMX19_04265 +0.4 0.9 Aliphatic sulfonates import ATP-binding protein SsuB compare
MPMX19_02927 +0.4 1.3 5,6,7,8-tetrahydromethanopterin hydro-lyase compare
MPMX19_00942 +0.4 1.9 hypothetical protein compare
MPMX19_03549 +0.4 1.6 HTH-type transcriptional regulator PgrR compare
MPMX19_04145 +0.4 0.7 hypothetical protein compare
MPMX19_00872 +0.4 1.7 hypothetical protein compare
MPMX19_01614 +0.4 1.2 hypothetical protein compare
MPMX19_04246 +0.4 1.2 hypothetical protein compare
MPMX19_04822 +0.4 1.6 Ornithine lipid N-methyltransferase compare
MPMX19_04494 +0.4 1.9 p-hydroxybenzoic acid efflux pump subunit AaeA compare
MPMX19_00764 +0.4 1.5 ECF RNA polymerase sigma factor EcfG compare
MPMX19_04549 +0.4 2.2 L-cystine-binding protein FliY compare
MPMX19_05862 +0.4 1.5 3-carboxy-cis,cis-muconate cycloisomerase compare
MPMX19_05936 +0.4 1.3 Alpha-galactosidase compare
MPMX19_04723 +0.4 2.5 Protein FixB compare
MPMX19_06488 +0.4 1.0 Taurine-binding periplasmic protein compare
MPMX19_00335 +0.4 0.8 Magnesium transport protein CorA compare
MPMX19_05176 +0.4 1.0 4-hydroxy-3-prenylphenylpyruvate oxygenase/4-hydroxy-3-prenylbenzoate synthase compare
MPMX19_01719 +0.4 0.8 Putative fluoride ion transporter CrcB compare
MPMX19_01383 +0.4 2.4 putative NTE family protein compare
MPMX19_06337 +0.4 1.5 Arsenic resistance transcriptional regulator ArsR1 compare
MPMX19_04054 +0.4 2.5 Adaptive-response sensory-kinase SasA compare
MPMX19_05685 +0.4 2.6 Protein-glutamate methylesterase/protein-glutamine glutaminase 2 compare
MPMX19_05496 +0.4 1.2 hypothetical protein compare
MPMX19_03978 +0.4 1.3 hypothetical protein compare
MPMX19_02105 +0.4 1.1 hypothetical protein compare
MPMX19_03825 +0.4 1.0 IS5 family transposase IS4811 compare
MPMX19_00074 +0.4 1.2 Electron transfer flavoprotein subunit beta compare
MPMX19_06390 +0.4 1.6 hypothetical protein compare
MPMX19_05273 +0.4 1.8 hypothetical protein compare
MPMX19_05022 +0.4 2.0 hypothetical protein compare
MPMX19_05690 +0.4 2.4 Protein phosphotransferase ChpT compare
MPMX19_01235 +0.4 0.9 hypothetical protein compare
MPMX19_04211 +0.4 1.5 hypothetical protein compare
MPMX19_01875 +0.4 1.7 hypothetical protein compare
MPMX19_04106 +0.4 2.7 hypothetical protein compare
MPMX19_05652 +0.4 1.0 hypothetical protein compare
MPMX19_06912 +0.4 2.2 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX19_06385 +0.4 1.1 hypothetical protein compare
MPMX19_05047 +0.4 2.0 Glycine cleavage system transcriptional activator compare
MPMX19_06807 +0.4 1.7 Solute-binding protein compare
MPMX19_01491 +0.4 0.9 hypothetical protein compare
MPMX19_01811 +0.4 1.1 hypothetical protein compare
MPMX19_03819 +0.4 1.4 NADP-reducing hydrogenase subunit HndA compare
MPMX19_03699 +0.4 1.1 Maltose/maltodextrin import ATP-binding protein MalK compare
MPMX19_06824 +0.4 1.3 Flavin-dependent trigonelline monooxygenase, reductase component compare
MPMX19_04363 +0.4 2.3 Purine nucleoside phosphorylase 2 compare
MPMX19_03194 +0.4 1.1 hypothetical protein compare
MPMX19_04699 +0.4 1.3 hypothetical protein compare
MPMX19_02353 +0.4 1.6 hypothetical protein compare
MPMX19_04226 +0.4 1.6 hypothetical protein compare
MPMX19_02275 +0.4 1.4 hypothetical protein compare
MPMX19_02835 +0.4 1.3 Phosphoribosyl-dephospho-CoA transferase compare
MPMX19_05221 +0.4 1.3 hypothetical protein compare
MPMX19_04677 +0.4 1.6 Sulfate/thiosulfate import ATP-binding protein CysA compare
MPMX19_03728 +0.4 0.8 hypothetical protein compare
MPMX19_06825 +0.4 1.8 hypothetical protein compare
MPMX19_05934 +0.4 1.4 Arylesterase compare
MPMX19_03039 +0.4 1.1 Cyclic AMP receptor protein compare
MPMX19_00719 +0.4 1.6 Protein ElaA compare
MPMX19_00730 +0.4 1.8 hypothetical protein compare
MPMX19_06513 +0.4 1.9 putative N-succinyldiaminopimelate aminotransferase DapC compare
MPMX19_04786 +0.4 2.2 Thymidylate kinase compare
MPMX19_03509 +0.4 1.5 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic compare
MPMX19_05261 +0.4 1.6 Multidrug resistance protein MdtE compare
MPMX19_05622 +0.4 2.7 Sensor histidine kinase RegB compare
MPMX19_05722 +0.4 2.0 hypothetical protein compare
MPMX19_06917 +0.4 1.2 HTH-type transcriptional regulator PgrR compare
MPMX19_03350 +0.4 2.1 GTP 3',8-cyclase compare
MPMX19_04381 +0.4 2.2 hypothetical protein compare
MPMX19_05630 +0.4 2.0 hypothetical protein compare
MPMX19_03494 +0.3 1.5 Regulatory protein AtoC compare


Specific Phenotypes

None in this experiment

For Azospirillum sp. SherDot2 in nl-ccm; spin-x control experiments